Basic Information

Gene Symbol
Ubp1
Assembly
GCA_951217065.1
Location
OX578272.1:109037631-109061777[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.12 2.3e+03 -0.7 3.0 85 146 16 84 4 90 0.55
2 3 1.7e-52 3.4e-48 165.6 0.2 13 186 276 446 265 460 0.89
3 3 5.8e-13 1.1e-08 36.3 0.2 190 221 479 511 470 513 0.88

Sequence Information

Coding Sequence
ATGTTGTATGTTTTGGCAGCTTCTGTCAAATCTCGTTTACAATCTATGATAGAtgatgaacaacatcagcaacaacaaacgcaacaacagcaacaacaacaacaacagcagcaaaacgGCAAAATTCCAACTGTAGGGCCAACAATCATTGATGTTCAAACTATATTTggacaacaacagcaacaacaacagcaacaagcAGCAGCAGTCACAGCAAGTGGTCAACGGAAAAGGCGAATGGATTGGAATCCACTTGAAATCAATCAAAATGGTAACAGTGGAACCAATTTACAATCAACTGCACCGAAAATTCCAAATTTGACAAATAGTAATGTGAACAATAGCAATAACACCGCTAACAATACCGTGAAcaaggaaaaagaaaagaaaaagaccTCAACTGGCAGTGGTCGCGGAAGTTGGGCTGATGACATTGATTTCGATTTAAATGGAGATTTTAACAGTACCGGCTACTTGAACAATGAACCATTTCTTTCATTTTCTCCGGCATTGACTGTTCTCAAACAGGAAATACATTCTCCACAAGCTGATCAATTAAAAGGCAACAAAAGTCCTCTTAATCCAGTTAATCAAGAGAATTCTCTTAGTTCGGATAATCATGATGCTGATCATCAAGTAAATGGAACAACAGCTGAGTTAAATGAATCCAATACTTCATGTAGATCTCCACAACAAGGCACCAAATCAAGTTATGATAATTCCAAGCCAACAACAATCAATGGATTCTCGATTAATAGTAGTAGTCAACAACAAACTGATAAATCATTGATTAGTGcTCGCAAAAGTCCAATTCAACCAGCAGCAGATTCATCTAAGTCCGAGAATAATATCACATCGTTAGCGGATGATTACAAATTCCAGTACATTTTGGCTGCGGCTACATCAATTGCAACAAAGAATAACGAAGAGACGCTAACTTATCTCAATCAGGGACAAAGCTATGAGATTAAACTGAAGAAAACTGGAGATTTGTCATTTTATAGGGATAAGATATTGAAgAGCGTCATCAAGATTTGCTTTCATGAGCGTCGTCTTCAGTATATGGAACGGGAACAAATGCAACAATGGCAAGCCTCACGTCCAGGTGAAAGGATCATTGAAGTTGATGTTCCATTGTCCTACGGTTTGTGTCACGTCTCCCAACCGTTAAATCCAAATTTCCTGAATACTGTTGAAGTGTTTTGGGATCCATTGAAAGAAGTAGGTGTCTACATAAAGGTTAACTGTATTTCGACAGAGTTTACACCAAAGAAGCATGGTGGCGAAAAGGGTGTCCCATTTAGGATACAAATTGAAACGTTTATAGAGAATGCAAATAGTTCGCCAGGAAGTGGCGACAGTACAACGAATTGTAATAATTTAGTAGGAGTAGGAGGAGGAGGAAGTGGAGTGGGAAGTAGTGTAATTGGAAAGTTACCAATTCACGCGGCAGCTTGTCAAATAAAGGTTTTCAAATTGAAAGGAGCCGATCGCAAACACAAACAGGATCGTgagaagatacaacgacgacCAGTATCCGAACAGGAAAAGTTTCAACCAAGCTATGAGTGCACCATTATGAATGATATTCCATTAGAAACGTTAGCATCATCGGCTGGCTGCTACAGCCCTGAATAtaTGAAACTTTGGCCAAATTCACCAGTTCATATACCAAAATATGATGGAATCATACCGTATGCCAATGTTTCACCAACAGCCAATTCTAGCCCGATAGCAATAAATAGTGTTACATCAACGAATACCAATAATTTGAAGCTAATGGATGCAAACATGGTCTCACCACAGCAAGTGGAATTGGATGATTATGTTAAGCAATCACCAAATATAATGGCTGAATCAACACCGGCTCAAGTTACTCAATGGTTAACCTACCATCGATTGACAACGTATGTTTCTACTTTTGCACACTTTTCCGGTTCAGATGTTTTGCGaatgtCCAAAGATGATTTAATCCAAATATGTGGTCTTGCCGATGGTATTCGTATGTTCAACATTCTTCATGCCAAAGCTATAGCCCCACGTCTTACCATTTACGTGAGCTTAGATGGCAACAGCTATAATGCcatttatttaatatcaaaCTCATCCAAGGAACTCactcagaaattatttaaattacctGGTTTTTATGAAATGAGTGCCAACAGCTCAAACATGAATGGTGGAGTTGATGGGGGTGTCTATCCAGGTTGGGgtATGCAATCAAAATACTCAGGGAGTGGTTCAAATATATTCAATGATGCATCTAAATCACCAATATATATAACTGGACCTTCTGGCGTTCATGTAACCATCACCGATGAAGTTCTTAACAACGAAATAAAAGATGGAAGTCTTTACGCACTTGAAGTACAAAATGGAAAAGTACTTATGAAGGtggttaataaaaatgataattaa
Protein Sequence
MLYVLAASVKSRLQSMIDDEQHQQQQTQQQQQQQQQQQNGKIPTVGPTIIDVQTIFGQQQQQQQQQAAAVTASGQRKRRMDWNPLEINQNGNSGTNLQSTAPKIPNLTNSNVNNSNNTANNTVNKEKEKKKTSTGSGRGSWADDIDFDLNGDFNSTGYLNNEPFLSFSPALTVLKQEIHSPQADQLKGNKSPLNPVNQENSLSSDNHDADHQVNGTTAELNESNTSCRSPQQGTKSSYDNSKPTTINGFSINSSSQQQTDKSLISARKSPIQPAADSSKSENNITSLADDYKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKTGDLSFYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNPNFLNTVEVFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQIETFIENANSSPGSGDSTTNCNNLVGVGGGGSGVGSSVIGKLPIHAAACQIKVFKLKGADRKHKQDREKIQRRPVSEQEKFQPSYECTIMNDIPLETLASSAGCYSPEYMKLWPNSPVHIPKYDGIIPYANVSPTANSSPIAINSVTSTNTNNLKLMDANMVSPQQVELDDYVKQSPNIMAESTPAQVTQWLTYHRLTTYVSTFAHFSGSDVLRMSKDDLIQICGLADGIRMFNILHAKAIAPRLTIYVSLDGNSYNAIYLISNSSKELTQKLFKLPGFYEMSANSSNMNGGVDGGVYPGWGMQSKYSGSGSNIFNDASKSPIYITGPSGVHVTITDEVLNNEIKDGSLYALEVQNGKVLMKVVNKNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00974397;
90% Identity
-
80% Identity
-