Basic Information

Insect: Automeris io
Gene Symbol: -
Assembly: GCA_036320925.1
Location: JAUDJH010000017.1:3539746-3561250[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.1 7.9 7.8 3.3 1 22 373 394 373 394 0.94

2 15 0.0003 0.023 15.8 1.2 2 23 406 428 405 428 0.93

3 15 0.1 7.8 7.9 0.3 1 22 466 487 466 490 0.90

4 15 1.3 1e+02 4.4 2.6 1 23 522 547 522 547 0.84

5 15 5.6 4.3e+02 2.4 0.7 1 9 730 738 730 747 0.82

6 15 0.00026 0.02 16.0 2.6 2 23 768 789 767 789 0.97

7 15 0.019 1.5 10.2 1.3 1 23 794 816 794 816 0.98

8 15 7.8 5.9e+02 1.9 0.8 2 10 841 849 840 861 0.80

9 15 1.2 95 4.4 0.3 3 23 917 937 916 937 0.90

10 15 0.03 2.3 9.5 0.3 2 23 953 974 952 974 0.96

11 15 5e-07 3.8e-05 24.6 2.1 1 23 980 1002 980 1002 0.99

12 15 2e-05 0.0015 19.5 0.8 2 23 1008 1029 1007 1029 0.97

13 15 0.0019 0.14 13.3 4.3 2 23 1036 1058 1035 1058 0.95

14 15 0.52 39 5.6 0.2 1 19 1065 1083 1065 1084 0.86

15 15 0.002 0.15 13.2 1.9 3 23 1097 1118 1096 1118 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.1	7.9	7.8	3.3	1	22	373	394	373	394	0.94
2	15	0.0003	0.023	15.8	1.2	2	23	406	428	405	428	0.93
3	15	0.1	7.8	7.9	0.3	1	22	466	487	466	490	0.90
4	15	1.3	1e+02	4.4	2.6	1	23	522	547	522	547	0.84
5	15	5.6	4.3e+02	2.4	0.7	1	9	730	738	730	747	0.82
6	15	0.00026	0.02	16.0	2.6	2	23	768	789	767	789	0.97
7	15	0.019	1.5	10.2	1.3	1	23	794	816	794	816	0.98
8	15	7.8	5.9e+02	1.9	0.8	2	10	841	849	840	861	0.80
9	15	1.2	95	4.4	0.3	3	23	917	937	916	937	0.90
10	15	0.03	2.3	9.5	0.3	2	23	953	974	952	974	0.96
11	15	5e-07	3.8e-05	24.6	2.1	1	23	980	1002	980	1002	0.99
12	15	2e-05	0.0015	19.5	0.8	2	23	1008	1029	1007	1029	0.97
13	15	0.0019	0.14	13.3	4.3	2	23	1036	1058	1035	1058	0.95
14	15	0.52	39	5.6	0.2	1	19	1065	1083	1065	1084	0.86
15	15	0.002	0.15	13.2	1.9	3	23	1097	1118	1096	1118	0.96

Sequence Information

Coding Sequence: atgTCTCAAAGCAGTAAGCCGAGATCTAGGAAATCAAAATTAATACCACGACGAAGTTTAGATTCGGAAGATGAAAATATTTACGAATTGCAGaatGATATTGATATGGAAATTAGACGAATGAAAACTGAAATACTTGATGTTGAATATGAACAggaatttaatgttaaaatagaGCCGAatttttctgaaaatatttGTGATACAGAATTTACTATTGAACCAGAATTAAATTTATCTGAAAATGTTTATGACAATGAATTTACCATTGAACCACAATTAAATTCACCTAGTTCAGTAGAACTTATTGATGATAAAGATTTTACTGTAGAGTCGCCATATTTATCTAGAGATGTTGATGACAAAGAATTTGATAATCAACCTCCATCAAATTTGTCTGACAGTATTTATGATCAACAATCAACTGTTGAGCCACAGTTGAAATTCTCCATAAAAGTAGAAGTAGAAGAGTTTGATGATTATAGAGTTAAAATCGAGAATGAAAATGAAGAAGTTAGAGTAAATAAGCAACTTATTGAAGAAAATAGTTCTATAGAACCCCATGATTCAGATACTCATGAAGAACTAAAAGAGATAGAGGATAATCAATCAGAAATATCTGTAGACGATGTAATAGTTACATTTGATGATGATGCTCTGTATACTTTTCTAGGAGATGCAACTGATATATCTTCAGAAGCAGATCGTATATTTAAAAACGGAAATTATGGGGATAAGTTTTTGGCTATGGAAATGAAAAACCGTTGTGGTATGCTAGGCAAAGCTCAGGAAAGTACTATATTTAATCAAGATTTGTGTGCCATTTTCAAGCAATGGAAAGTTTGGAACGCATCAAGAAACTACAGTCAAGAACCTCTTTTTTATAAATGCTACATATGCTCCTTATCCTGGTGGTATTTGGGGCCATTCGTAGAACACGCAAAGGAACATGATACGGCAAAGAATGTGATGTATCTTGAGAAATGTTCCTTTAGATGCAGCATTGTTTTGGCAAATTTTAGGGGGGAAGCAGAAAAGTTTATCGATACTCCAGGGAATTGCTGGAGGTGTGACAGACCATTCGAGTTTCATGTAATGAAAGACACAGATCGTGGTTACAAATGCGTGGGCTGTAAAAAAACGTATCACACGTGCAGCAGATTAGCGGAGCACGAGAAAACATGTTTAGAAATGCGGGAACCGGAATCTGATCTTGTGTGTAGTATTTGTAAACGCACATTTAAGCTTCGTAAGGACTTAAACCGTCATCGTATTTTAAGCCATACAGTTAGATCGGACCTGCCAATCATCCCTACATATAAAATTTGCAATGGATGTTACAAGAAATACCATTTTCGCGTCTGGCATCATTGCCCAAAGTTTGGATACTTTCGATATATTTGCAAAACATGCTTAACAGGTTTTCCAGTCAGGTCTTTGTATAACAGTCACATATCAAAGGCTCAGCATAAAGTGAAATGTAAATTGTGCAATACTAAGATAAAGCAACATTGTCAGGAGATACCTCATTATGTGAGTCACTCGAAAGATATCGTATCGGCTCATAAATGTACAAAATGTACGGAAGTGTTTTTAGTTTTTACGAAAGAGTCTATGCAACGGCATATGATGCTTTGGCATAAACAGAAGtacaatgtaaaaaaacataGTTTTGAATTGgTATTGCTTCCCGTAAAATGTATGAAGTTTCTCAAGAAAATTGATGTCAAGCTTATTGATTTGGggTCCCCGGAGAGTAATGAAGATGATTgtaaagaaaattgtaaaaagaaaGAGCTGACAAATGAAGTTACAagtttcaaaaacgataaaatattgGAGGAAGCCGTTATGGATACCACTGAGATAAAAATAGAAGTGGACGAAAGTTTTGACGATTTAAGGAATCAATCGGAACGTATGAATCTCTCTGAAGAAAATATGGCAGTTTATAATAGGTTCTTGGCAAATATTTTAGGGGAACCATCGGAATCCGGCAGccaaataaacttcaagattaCAGCAGAAGTGCAGGATCACAATGATGATGTCAAATTGTCACCAAATGACTGCAGTGACGATGATGACAGGCTTGTAATCGACACGCAAGAACAACAGAGTGATGATGAAGGAAACTCTATGGAGCCGGAGGTGATTCTAAAGCCAAGTGCGCGATTTCCAAGGATCTACAAGTGCAATAAGTGTGATTACGAGGGAGTTCACAGGGAGTATCGGGAACACAGGTCGTTCTTCTGCAGCATGATGAACAATCTCAAAGGACGGGAAGTTCCAAAAACGGTCACATGCAACGATTGCACACACTCGTTCTCGTCGAACAAGGCTTTTATACTACACTTACGGAAACACGGGTACGAGCAGTTCCAATGTCCGCTGTGCCTCTTAAACTTCGATCGACTGCAAAAGCTGATGGGGCATATGAACCATCACATTGTTAGGGGATACCTCAAATTCAAGACAATAAATAGCCACAATGCATCAAAGAAAATTGGTGTAAAATTGAAATGCAAAGAATGTCAGAAAACGGTGCCCGAATGTGAGATGTTTAGCCACTGGGTACTACATTTCAAGGTGAGGGGACCCAAGTATGAAGAGAAGAATAAAATCAAAATGAATAATGCAGTTGACCGCTCGTCTCTCGTCCCTGGAAGGCTCCTGAAGGACAACACAAGAGATGAACTTATATGCAGGTTGATGTGGATAGGTCCGCACCAAGCCGACCAGAAGACATGCATCGTGTGCAACCGAGCCTTTGGTAGACTCAGCGATAGCAAAAGACACCTCATAGAACATTTGCTCGTGGACGCTTTCGCTACAAAGGTGTGCTACAATGGTCTAAGATGCCAAATATGCGGCGAGCTGTTGCCGAAAGTGGAGAAGTACAAGCGACATATGCGGGAGCACGCCTCGCTACCGATCTACAAGTGCGAGCTCTGCGACAAGACGTTCAGCGACTCGAGCAACTTCGTTAAGCACAAGAAGGTGCACAACCTCGAAGCTGTCGTCTGTGACATCTGCAAGAAGAAGTTCCAGATGAAGTCTTCGCTGGAGAAGCACATCCAGATGCACGCCGAGACGGAACCGATCCCGTGCAAATTATGCAAGAAGACCTTCTTCACGGAGTCAGCATACAAAAAGCACCACAAGAGCAAGCACGAGAAGCGCACATCGCAGTTCCGCTGCCAGATATGCGGCCTGTACTTCGTCAAGCTGAAGGACAAGTGGGACCACCTCTGGCTTGTCCACAACGAGCGCAGGCAGAAGGCCGACTGCCCGGTCTGCACGCAGAAGTTCAGGAAGATGCACGACTTGAAGAGTCACCTGCGAGAGGAGCACGACCCGCTGGAGCTGAAGCAGTGGCAGCTCACCTCCCGGGACGGTGGAGATGTGTACGAGTTCATCAAGAAGAACTCTGGTTCGACCTTGGGCGAGAGCAAGGAATTCCGTCTCAACGCTCTGTGA
Protein Sequence: MSQSSKPRSRKSKLIPRRSLDSEDENIYELQNDIDMEIRRMKTEILDVEYEQEFNVKIEPNFSENICDTEFTIEPELNLSENVYDNEFTIEPQLNSPSSVELIDDKDFTVESPYLSRDVDDKEFDNQPPSNLSDSIYDQQSTVEPQLKFSIKVEVEEFDDYRVKIENENEEVRVNKQLIEENSSIEPHDSDTHEELKEIEDNQSEISVDDVIVTFDDDALYTFLGDATDISSEADRIFKNGNYGDKFLAMEMKNRCGMLGKAQESTIFNQDLCAIFKQWKVWNASRNYSQEPLFYKCYICSLSWWYLGPFVEHAKEHDTAKNVMYLEKCSFRCSIVLANFRGEAEKFIDTPGNCWRCDRPFEFHVMKDTDRGYKCVGCKKTYHTCSRLAEHEKTCLEMREPESDLVCSICKRTFKLRKDLNRHRILSHTVRSDLPIIPTYKICNGCYKKYHFRVWHHCPKFGYFRYICKTCLTGFPVRSLYNSHISKAQHKVKCKLCNTKIKQHCQEIPHYVSHSKDIVSAHKCTKCTEVFLVFTKESMQRHMMLWHKQKYNVKKHSFELVLLPVKCMKFLKKIDVKLIDLGSPESNEDDCKENCKKKELTNEVTSFKNDKILEEAVMDTTEIKIEVDESFDDLRNQSERMNLSEENMAVYNRFLANILGEPSESGSQINFKITAEVQDHNDDVKLSPNDCSDDDDRLVIDTQEQQSDDEGNSMEPEVILKPSARFPRIYKCNKCDYEGVHREYREHRSFFCSMMNNLKGREVPKTVTCNDCTHSFSSNKAFILHLRKHGYEQFQCPLCLLNFDRLQKLMGHMNHHIVRGYLKFKTINSHNASKKIGVKLKCKECQKTVPECEMFSHWVLHFKVRGPKYEEKNKIKMNNAVDRSSLVPGRLLKDNTRDELICRLMWIGPHQADQKTCIVCNRAFGRLSDSKRHLIEHLLVDAFATKVCYNGLRCQICGELLPKVEKYKRHMREHASLPIYKCELCDKTFSDSSNFVKHKKVHNLEAVVCDICKKKFQMKSSLEKHIQMHAETEPIPCKLCKKTFFTESAYKKHHKSKHEKRTSQFRCQICGLYFVKLKDKWDHLWLVHNERRQKADCPVCTQKFRKMHDLKSHLREEHDPLELKQWQLTSRDGGDVYEFIKKNSGSTLGESKEFRLNAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00187602;
90% Identity: iTF_00187602;
80% Identity: -