Basic Information

Insect: Automeris io
Gene Symbol: -
Assembly: GCA_036320925.1
Location: JAUDJH010000023.1:9652070-9655984[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0076 0.58 11.4 1.3 1 23 338 361 338 361 0.95

2 18 2e-05 0.0015 19.5 3.1 1 23 366 388 366 388 0.99

3 18 1.5 1.1e+02 4.2 0.4 2 23 392 413 391 413 0.94

4 18 0.013 1 10.7 0.4 1 23 418 441 418 441 0.96

5 18 1.1 83 4.6 2.2 5 23 505 524 502 524 0.92

6 18 5.6e-05 0.0043 18.1 1.0 1 23 530 553 530 553 0.94

7 18 0.14 10 7.5 0.3 2 21 557 576 557 577 0.90

8 18 0.6 46 5.4 1.1 1 20 585 604 585 608 0.88

9 18 0.0033 0.26 12.5 0.6 1 23 613 636 613 636 0.96

10 18 0.033 2.5 9.4 0.2 2 23 649 670 648 670 0.96

11 18 0.00014 0.011 16.8 2.1 1 23 676 698 676 698 0.97

12 18 9.5e-05 0.0072 17.4 1.2 3 23 735 755 733 755 0.97

13 18 0.024 1.8 9.8 2.2 2 23 759 779 758 779 0.97

14 18 0.01 0.77 11.0 0.6 2 23 797 819 796 819 0.96

15 18 0.00046 0.035 15.3 3.9 1 23 825 847 825 847 0.98

16 18 3.1e-05 0.0023 18.9 5.0 2 23 854 875 853 875 0.96

17 18 0.004 0.31 12.3 2.1 1 23 881 904 881 904 0.96

18 18 2.8 2.2e+02 3.3 1.9 3 23 911 932 910 932 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0076	0.58	11.4	1.3	1	23	338	361	338	361	0.95
2	18	2e-05	0.0015	19.5	3.1	1	23	366	388	366	388	0.99
3	18	1.5	1.1e+02	4.2	0.4	2	23	392	413	391	413	0.94
4	18	0.013	1	10.7	0.4	1	23	418	441	418	441	0.96
5	18	1.1	83	4.6	2.2	5	23	505	524	502	524	0.92
6	18	5.6e-05	0.0043	18.1	1.0	1	23	530	553	530	553	0.94
7	18	0.14	10	7.5	0.3	2	21	557	576	557	577	0.90
8	18	0.6	46	5.4	1.1	1	20	585	604	585	608	0.88
9	18	0.0033	0.26	12.5	0.6	1	23	613	636	613	636	0.96
10	18	0.033	2.5	9.4	0.2	2	23	649	670	648	670	0.96
11	18	0.00014	0.011	16.8	2.1	1	23	676	698	676	698	0.97
12	18	9.5e-05	0.0072	17.4	1.2	3	23	735	755	733	755	0.97
13	18	0.024	1.8	9.8	2.2	2	23	759	779	758	779	0.97
14	18	0.01	0.77	11.0	0.6	2	23	797	819	796	819	0.96
15	18	0.00046	0.035	15.3	3.9	1	23	825	847	825	847	0.98
16	18	3.1e-05	0.0023	18.9	5.0	2	23	854	875	853	875	0.96
17	18	0.004	0.31	12.3	2.1	1	23	881	904	881	904	0.96
18	18	2.8	2.2e+02	3.3	1.9	3	23	911	932	910	932	0.95

Sequence Information

Coding Sequence: ATGGAAGAAACCATTGAGGATGCACAGTTAAAGTGTCAAAATATCGAATGGCTAAAGCAAAGATTGACGGCAGTTTGGAATTCAACGCGATTTTGTGGACTCTGCctgaattcttttaaaaatcttaattcAGTCCATATGGAGTTTGTTATAAGCAGACAGAAGAATTCACAATCACTTATagatattatgaattatttatttaatgataatATAGAAAATATCATGTCGAGTACATACGTTTGCGATCAGTGTACAGAAAAAGCCCTCCAATCATATATATTCATTCGTAATACTAAGCAATTATCAAAAATTATCCGCAACTGCATAATGGATatcaataataaagtaatagaCATAAGCGAGCAAGTGCTCGAATCAGTTGACTGCGAGAACTCTAATGTTATGCTGGTTTTAGAAAACGATACAGAACTATATGAAGAAATCAATGATTTAACTGCAGCCAATGAAATAATTCCAACAAATAAACCAATCGTCAATAAGTATAAATTATCGCAAGAGATTGTAGTCCCGAAATCGGAAGATAAAGTTGATTCATCgaaaagtaaacaaaacttACCGACAGACAGAAGATTCGTAAAAACGCATAGGGTAGTTAATAAACTTATTGCCAGTAAAGATCAACCATTACTAGAGAAATATCCTATAAAAATTGAAGATGTAGATCAATCTAATTTAAGCAACTCACACGTCCAGAAAATCGCCGACCCTGAGGAATGTTCTCGTCTCTTGGATGCTATTACATCTGGAGATGTTCCAGTGGTTAATACACCTAATGTACCAGTAAAGACAGAAATCGTAAACAAGAAAGAGACACCTACAGAACTTGTAACAACAAGAATTATAGAAAGCAATGTTGAAAAGAATAAGGCAAATAAAGATATATCGATAGAAGATTCGTCTCCAGTCATTAGCTTAGAAAAGgggaaaattgttataaaaccGATAAAAACTGCGTTTAACATGCCAACTGTTCCGAGTTATACCACATTTAAATGCACAGAATGCCCCGATATATTCACAACATACAGATCCCTAAAAGACCACGAGAAATTAAAGCATAGGTCACAGATATACCAATGTAAATTGTGCGATAAATCATATAACACTCAGCAATAtcttaatttacattataaaagtCATTCCAAATCGCGATGTAAAATTTGCCAAGTTATACTCAGTGAAGAAGAATTATTCACTCATTTGAGACAAAACCACGCAAATTTGGTATTTGCTTGTAAATTCTGTGAACTTGTCTACTATAACGAAGATGCTTTGGCAACGCATTTTAAAACGAGTCATTTGGTTAACGACACGTCGAAAAATTCGAAGTGTGAGATGTGCTTAAAAGAAATGAGTATGATGGTATTGAAGACTCATAGATGTAAATTCAGTTGTCCTGACTGTTTTGTCATGCCATGCACCCATTACGACTATTTAGTGGCCTATAGAGAGCAGATATTAAACCATGGAACCAAAGTAAATTGTATAGATTGTGACTATGTGACCCATAGAAAGGAGTGTCTTATAACCCACGTCAACAGAGAACATTTAGACCACCATCCTTTCACATGCAATGACTGCGGGATGCAGTTTTACACGAAAATCAGTCTGAGGAACCATATTGATCAGTATCACATCAATAACGTATGTGAATACTGTGATGAAGAATTTAAGAAACGGAAAATTCTGTCTCAACACAGGAAAGTCTGTAAAACAACTAAAAGGGAGTTTCCTTGCTTTAATTGCAAAGCTTCGTTTGATACGGAAGAAGAATACGATAAGCATAATTATTTGAGACATTGCGATGGTGGATATGACTGTAAACTATGCCATAGAAGGTTTATAGAAGAGGCGAAACTAGAGGAGCATCAAGTTACTGCTCACAGTCGAGTACAGTTCAAGAAACGAAGAAAGAATATTGAATGTTCGCTCTGCGAAATCAAATTCAACAATGTTAAAGAGTTATCTTCACACGAAGACACCCACGAACCAGGCACAATGTTCCCATGTAAAAAGTGTAATAAGAAATTCGTTAATCTGAAAAAGCTGTACGTGCACCAGGCAAGACATTATGACAGGATCACGTGCCCGGGATGCAAAAAGAGGATTGTTTCCGTATTTTACCCCCAACATGCAGTTCGCTGCGTTTATATGAGGGAACCGGGAAATTTGCAAATATGTGAAGTTTGCGGTAAAACGTTCCATTTGGAATCTCTCCTCCAACTCCATCAGAAAACCCACAATAGAGTAAAATGTCAAGAATGTGGGAAATCTGTTAAGGCTTCCTCCATACATCACCACATGAGGGCACACGGGGGGAACAAGTACGCTGGAGAGAAAAATTTGAGAACAGTACCGAAGATCGAATGTAAAATTTGTGGGCATTTGTTGAGGAAGAAAGTCGACCTTGATGCACACATGAACAGATACCATTTGAAGGTCAAACCATACATGTGTCATGTATGTAACAAATCATTTTGTGGGAAGCCTCGACTCAATGAACATTTGCTGACACATACAGATAACAACTCTTGTTTTTGCTCCATATGTGGCAAGAAATTTGCCAACAAAGTGTGCCTGAAAATGCACATGAGAATCCACACTGGAGAATCTCCATATACCTGTGACTTGTGTGGCCAAAAATTCAGATCATCAAGTATTATGAAAACGCATAGGCTAAAAAAGCATTTGGAGAAAAATGTCGCTTGCCCAGGCTGTGATAACATGTTCCATATCGTTCGTGAAATGCGGCACCATTTTAAGACTGTTCACTGGAAAGATAAACATAGACCTTTTAATTATAAAGAGGCGGTTGATCCTAAATATTATCACCTCTTTGAGGATAGAAGATTGGCATATACGGAGTCAGATGTTATTATAGAAACGGCGTGA
Protein Sequence: MEETIEDAQLKCQNIEWLKQRLTAVWNSTRFCGLCLNSFKNLNSVHMEFVISRQKNSQSLIDIMNYLFNDNIENIMSSTYVCDQCTEKALQSYIFIRNTKQLSKIIRNCIMDINNKVIDISEQVLESVDCENSNVMLVLENDTELYEEINDLTAANEIIPTNKPIVNKYKLSQEIVVPKSEDKVDSSKSKQNLPTDRRFVKTHRVVNKLIASKDQPLLEKYPIKIEDVDQSNLSNSHVQKIADPEECSRLLDAITSGDVPVVNTPNVPVKTEIVNKKETPTELVTTRIIESNVEKNKANKDISIEDSSPVISLEKGKIVIKPIKTAFNMPTVPSYTTFKCTECPDIFTTYRSLKDHEKLKHRSQIYQCKLCDKSYNTQQYLNLHYKSHSKSRCKICQVILSEEELFTHLRQNHANLVFACKFCELVYYNEDALATHFKTSHLVNDTSKNSKCEMCLKEMSMMVLKTHRCKFSCPDCFVMPCTHYDYLVAYREQILNHGTKVNCIDCDYVTHRKECLITHVNREHLDHHPFTCNDCGMQFYTKISLRNHIDQYHINNVCEYCDEEFKKRKILSQHRKVCKTTKREFPCFNCKASFDTEEEYDKHNYLRHCDGGYDCKLCHRRFIEEAKLEEHQVTAHSRVQFKKRRKNIECSLCEIKFNNVKELSSHEDTHEPGTMFPCKKCNKKFVNLKKLYVHQARHYDRITCPGCKKRIVSVFYPQHAVRCVYMREPGNLQICEVCGKTFHLESLLQLHQKTHNRVKCQECGKSVKASSIHHHMRAHGGNKYAGEKNLRTVPKIECKICGHLLRKKVDLDAHMNRYHLKVKPYMCHVCNKSFCGKPRLNEHLLTHTDNNSCFCSICGKKFANKVCLKMHMRIHTGESPYTCDLCGQKFRSSSIMKTHRLKKHLEKNVACPGCDNMFHIVREMRHHFKTVHWKDKHRPFNYKEAVDPKYYHLFEDRRLAYTESDVIIETA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -