Aio016501.2
Basic Information
- Insect
- Automeris io
- Gene Symbol
- ZBTB8B
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000017.1:4016438-4036095[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.065 4.9 8.5 0.2 3 23 47 67 45 67 0.88 2 13 0.0033 0.25 12.5 3.1 1 20 73 92 73 94 0.94 3 13 2.1 1.6e+02 3.7 2.7 2 17 98 112 97 117 0.72 4 13 0.0019 0.15 13.3 0.4 1 23 281 303 281 303 0.98 5 13 0.0055 0.42 11.9 0.8 1 23 310 332 310 332 0.95 6 13 0.18 14 7.1 4.0 1 23 336 359 336 359 0.94 7 13 8.3e-05 0.0063 17.6 6.0 1 23 394 416 394 416 0.97 8 13 0.00054 0.041 15.0 0.6 2 23 423 445 422 445 0.95 9 13 0.0032 0.24 12.6 1.1 1 21 450 470 450 475 0.93 10 13 5.2e-05 0.004 18.2 0.3 1 23 483 506 483 506 0.95 11 13 0.019 1.5 10.1 0.1 3 20 514 531 514 535 0.94 12 13 0.00012 0.0091 17.1 3.7 1 23 543 565 543 565 0.98 13 13 0.061 4.6 8.6 0.0 5 23 574 593 572 593 0.92
Sequence Information
- Coding Sequence
- ATGAGCAAAATAAGGCCCAACATGCTGATGATCAAAAAGGTAAATTCCAATGGAAACATCCAGGTAACGGAGACTTATAGAGAAATGGTAGATTTGAAACGCATTTACCCTATAGGACATTCTCAAGAGAAGGTTATATGCCAAATATGCCAGAAAGTATATGCAAAGAGAGATTTGAAGAAGCATGTGGAGGAAACACATAGCAAGATAGCAAAGCACCATTGTAATAACTGTTTGAGGGTTTTTAAACGTTCTTACACATTCTTGAAGCATATGGAAGATGCACTGCTTATATGTCCTATATGCCAGTATATGTTTAAGAAATTTCATAAATTTCTTCATCAGTGTAGAAGTGTTAGTGAAATGCTGAAAAATGGTATTAAATTAGAAACCAATTTCATCAGCCATTATCCTGAGCTGGTCATTACTGACCCAGTAACTCATCACCTAGGTCCAGATGTATCCGACGATGATCAAATACAAGATAGTTGCGATTTCACCacatttgatgatgatgatgaattacCATTGGTTTTGTTGAGGAATGATAATCCTGTGGAGGTTAAAGGTAGcagaagaaagaaaagaaagaagaaagatAGGgtaataaaaaatacagaagaTCTCAAGGAAGAAGTCATAGTAAAAGAAGAATATGAATTGGATCCGAGTATAGGAAGTGAGAATGGAGATGTAAAGAGACCCAGTAGTACTAGGGAAGGGTTTTCAACGCGAATGGTGCAGGAGACGAATGAATATACAGTTATTAAGTTATCCAAAGATCAAGTTTTAGAAGAGATGAGAGACAAAGCAAAAAGCGACGCGTATAACCGAGCACCGTACAAATGCGAGAAATGCGTCAAGGGATTCAATTTTGAAGATGTACTAGCGACTCACATGGTCAAACATACAACGgaaAACGGGTTATTTCTGTGTGATATATGTACTCAATACTGCCCCAGTCCAGTTTCGTTGCGGGGGCACATGAAGTCTCACACAACGAGGTACAAATGCAAGGTGTGCGGTCACATTCGGCTATCAAGGCAGCATCTTCTAGaacatcacgctatatcgcaCACCAGCGAGGCGCACGTCTACCGATGCGTTAGTTGTCTCTTCACTACTAACAAGCGAACTGTGATCCAGAAACACGTTAAAAGCCACGGTTCGTTGGAGAGGCACTCTTGCCATCACTGTGGGAAGATGTTCAAAACAGTAGAGTCGCTGCGGATACACGTTTCACGGCACGACAAGTCGCGTCGGTCCGTGTGCTCGCAGTGCGGCAAGGGGTTCCTATACCCGTCGCTCCTGCAGAAGCACGTGAGGCACGCGCACGAGCGAGACGACTACTATTGCGTCGAGTGCGACGTCAAGTTCAAATCGGCCGAAACGTTAAGACTTCACTTTAAAAAGGCGAAGAGACATCGTGATTCTACATCTTACAAGTACTGTTGCTCTGAGTGCCCTGAGCGATTCGCGAGCCCGTCGTCGCTGTCGGTGCACCGGAGCGTGGCACACGGGGCTGGCGAGCGGCAGTGGTGCTCCTCATGTGGACGCGCTTACAACAGCAGGGAGGCGCTGCGGGCGCATGTGTGGCGGGCCCACGCGCCGGCGCCGCGCCCGCGGCATGAGTGCGCGCTCTGTCACAAGACCTTTTCCCGAAACAGTATAGTTAAGGCGCACATGCGGACGCATACGGGCGAGAGGCCGTTCGTCTGCGAGTGCGGGGCGGCCTTCGCGCAGCGCGCCACGCTGAGAGCCCACGCCGCTTCTAAGCATGGACAGaaacaAGATATCCCCTCTGCCGATGTGGAAGTTGTTCAAAATGAGGACCATAGTCAAATCAAGAAAGAGGCGAATCAATACAATTTGATAAAACTGTAA
- Protein Sequence
- MSKIRPNMLMIKKVNSNGNIQVTETYREMVDLKRIYPIGHSQEKVICQICQKVYAKRDLKKHVEETHSKIAKHHCNNCLRVFKRSYTFLKHMEDALLICPICQYMFKKFHKFLHQCRSVSEMLKNGIKLETNFISHYPELVITDPVTHHLGPDVSDDDQIQDSCDFTTFDDDDELPLVLLRNDNPVEVKGSRRKKRKKKDRVIKNTEDLKEEVIVKEEYELDPSIGSENGDVKRPSSTREGFSTRMVQETNEYTVIKLSKDQVLEEMRDKAKSDAYNRAPYKCEKCVKGFNFEDVLATHMVKHTTENGLFLCDICTQYCPSPVSLRGHMKSHTTRYKCKVCGHIRLSRQHLLEHHAISHTSEAHVYRCVSCLFTTNKRTVIQKHVKSHGSLERHSCHHCGKMFKTVESLRIHVSRHDKSRRSVCSQCGKGFLYPSLLQKHVRHAHERDDYYCVECDVKFKSAETLRLHFKKAKRHRDSTSYKYCCSECPERFASPSSLSVHRSVAHGAGERQWCSSCGRAYNSREALRAHVWRAHAPAPRPRHECALCHKTFSRNSIVKAHMRTHTGERPFVCECGAAFAQRATLRAHAASKHGQKQDIPSADVEVVQNEDHSQIKKEANQYNLIKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -