Basic Information

Insect: Automeris io
Gene Symbol: -
Assembly: GCA_036320925.1
Location: JAUDJH010000032.1:4924263-4933601[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.9 4.5e+02 2.3 0.0 3 23 117 137 115 137 0.94

2 17 0.27 20 6.5 0.1 2 23 141 163 140 163 0.94

3 17 0.004 0.3 12.3 0.2 1 20 433 452 433 454 0.95

4 17 2.2 1.7e+02 3.6 0.4 1 22 501 522 501 524 0.73

5 17 0.2 15 7.0 4.8 1 23 533 556 533 556 0.96

6 17 4.9 3.7e+02 2.6 0.3 8 23 607 623 604 623 0.89

7 17 0.093 7.1 8.0 0.1 2 23 634 656 633 656 0.93

8 17 0.13 9.9 7.5 0.5 1 23 661 684 661 684 0.95

9 17 5.6e-05 0.0043 18.1 1.7 1 23 690 712 690 712 0.96

10 17 2.4e-05 0.0018 19.3 1.9 1 23 719 741 719 741 0.98

11 17 0.0001 0.0079 17.3 2.3 1 23 746 768 746 768 0.96

12 17 0.0016 0.12 13.6 1.4 1 23 774 796 774 796 0.98

13 17 2.5e-06 0.00019 22.4 1.5 1 23 802 824 802 824 0.98

14 17 0.00066 0.051 14.7 2.5 2 23 831 852 831 852 0.98

15 17 0.001 0.078 14.2 0.7 2 23 860 882 859 882 0.97

16 17 6.8e-05 0.0052 17.8 0.3 1 23 887 909 887 909 0.98

17 17 0.00043 0.032 15.3 1.0 1 23 915 938 915 938 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.9	4.5e+02	2.3	0.0	3	23	117	137	115	137	0.94
2	17	0.27	20	6.5	0.1	2	23	141	163	140	163	0.94
3	17	0.004	0.3	12.3	0.2	1	20	433	452	433	454	0.95
4	17	2.2	1.7e+02	3.6	0.4	1	22	501	522	501	524	0.73
5	17	0.2	15	7.0	4.8	1	23	533	556	533	556	0.96
6	17	4.9	3.7e+02	2.6	0.3	8	23	607	623	604	623	0.89
7	17	0.093	7.1	8.0	0.1	2	23	634	656	633	656	0.93
8	17	0.13	9.9	7.5	0.5	1	23	661	684	661	684	0.95
9	17	5.6e-05	0.0043	18.1	1.7	1	23	690	712	690	712	0.96
10	17	2.4e-05	0.0018	19.3	1.9	1	23	719	741	719	741	0.98
11	17	0.0001	0.0079	17.3	2.3	1	23	746	768	746	768	0.96
12	17	0.0016	0.12	13.6	1.4	1	23	774	796	774	796	0.98
13	17	2.5e-06	0.00019	22.4	1.5	1	23	802	824	802	824	0.98
14	17	0.00066	0.051	14.7	2.5	2	23	831	852	831	852	0.98
15	17	0.001	0.078	14.2	0.7	2	23	860	882	859	882	0.97
16	17	6.8e-05	0.0052	17.8	0.3	1	23	887	909	887	909	0.98
17	17	0.00043	0.032	15.3	1.0	1	23	915	938	915	938	0.97

Sequence Information

Coding Sequence: ATGTCTTCAGAAGAATCGGACGATGAACCTTTGTCAGTTTTAGCcgctaacaaaaaattaaatcccGAAAAGTTTCCCGATATTATATTGCCCAGTGAAATTgttttagaaacaaaaaaaaagaaaaagaaatttaagCCACTTAAAAATACACCATTAACCATtcaattgcacaaaaaattagcCAACGTTTTGGCCCCGCCTGTTATCGAGCGTCCGACAGATGTCTGGCTATATCTGAAAGACTTAAATCCGAATGGACCATACAGCTGTTTGCTATGCCCAGACTGGTTTATAAACCGATCAAAGATTATAATACACTATGTGCTGAATCATAAAAAGGATTTTTGTGGGATTTGCAGatattttgTACCTGATAGGCAGGCATGGTGGGCACATGTACAGTTCCACACCCCTTGGCCATGTTCTCAATGTATTGAAAATTTTGTAACTGAGAATGCTCTACGGCAACATCTTAGTAGTGCTCATAATCTAGTGCACTGTCGTCTATGCCACTTTCGTGTATCAGCTGATGACCAGTACAACACCCATTTGTATCAAAAGCATAATGTATCCAATGTGTCTAGTAAGGATGATGAAGTACTCTGGCAATTAGATTCTCAGGATGACACTAAGTTCACATGCTTATTGTGTTTAAGATCAAGTAATATGACCCGTTTGTTCTTTAATCACTATATGGGCTACCATCACTTCACCCTTAAATGTTTTACTAGAATTATTTCTGGAAGAGATCCCCCCTTTTTGGTATATGGTGCAGATGTAAGCTCAGAATTTGTTGAGAGTCAGCTCAAAATAAGAACAAAACATGGTTACTTAGATTTAGAGAAGTCATCAGTGGAATGCAATGACACAGTTCCAACAACTCATTTTGAAACAGAAACTATAATTGAAGTTAAAGAAGAAGTGTTTACTGACTCAGAAGAAGCACAATGTAATGGTAATGTTTATAAAGTGGAATTTAGAAATACAGAACTTAACACTAATAATCATAATGGGGACAATGAACTTACAAAAACTTACAAAGGGGAGGAAGATTTTGATGTAACATTGATggaaataataatgtttcaCAAAGGATATCTAgattatgttaataaaattcTGAATGATATAAAATTGAGCTTAATGCCTAAAATTTCTTATGTTGATTATGAAAAGTTTCCCATAGATGTTATATCTGACATTTATTGCTCACTGTGTAAAACTAAACATAGTACTACTAATGAATATTCACATCATATGACGAAAATGCATTCCGTAAAGTGTTTGCCAAGTTTTTCTTGCAGGGTTTGTTCACTGTCTTTCGAATCTCAAACTGAACTCGAAAGCCATATTTCACAAGAGCTCAGTGATTTCGATGACCTTTGGCTATGTCAGTTTTGCGACAAGGAATTTCTCAACCGTGAAGTGTCAAGGTTGCATTTAACAGAACACTGGGATTTAATTGAATATGACAATTGTTTTAGCCCACATTTaggttttaaatgtaaatattgccCAACACTGTTTTGGAATGAACCTGATAGAGAATCTCACCAAGttagaatacattttaataaatataaagaagaatATTACAAGTGTGATAGTTGTAATGAATTTTATAGTGACAAGATGTGGTTTGTTCACCATCATGTTACAAAACATCAGAATATAGAGGAAGACCTTCCGTTGTATCTATTGAAATGTTGTTTGTGCTTCTTTGTCCTTTCTAATGTGGAAGAGATGAGGAGCCACTTTCAAACGAGTCATCCTGAAGCAAAGAAAGTATTTTGTTCATTGAATCCATGCAAGTACAAACCATTAAGTCAGCGGAAGTCATTCAAGATCCATCTAAAGACAATTCACAATCGGATAGCCAAACCGTCACGGGTCATTACATGTACTCTATGTAGTCGAGAATTCTCCAGCGTGAGGGCTATAAGCGCGCACATGGGCAAAGTGCATGGTCCCGGGAAATTTAAATGCAAGATTTGTAAGGAGGCACTGCAGACTGCGGATGAAAGAAAACTCCACTACCTAATTCGGCATCCTGGACAACATCCCTTTGAGTGCAATGTTTGCGGCAAATCATTTCAGTACAAATCATCACTGTACATGCACAAACAAGACCATGTACCGAATAAGAAAAGTTTCACTTGCAGTTATTGTAAGAAAGTATTTGTGAAGAAGGATTCGTTCCGCGAGCACGTGCAGATCCACGAGGGTCCGCGGCACGCGTGCTCCTACTGCCCTATGAGGTTTGTGCAGCGCAGCAACATGCTGCGGCATGAGCGGCGGCACACCGGCGAGCGGCCCTACGCCTGCTCCCAGTGCCCGCGCACCTTCGCCGACAAGGGCGCCTGTAACTCGCACACCAGGACCCACTCGAAGGACACATCTTATGCATGCATGTATTGCGGACAGACGTTCGTTCAGAAATCAAAACTTACATACCATATTAGAAAACATACTGGAGAGAatttggAAACTTGTTCAGTATGCTCCAAGTTGTTTACAAGCGCGTGTTCGCTACGAGAGCACATGAAAGTGCATAATGTTAACAAAAAGATGGTGAAATGTCCCCTATGTGatCGGAAGTATCAAGACGAGCGCTACATGTTACGGCATCTCCGCACATCTCACGCTCAAACTCAGTTCAATTGCCCGCTGTGCCCCAAAACCCTGACCAGCCCGGCTGGGCTAAGGCACCACGTTTTAACTCATAGTGGGCTGAAGACTTACAACtgtAAAATCTGCCCCAAAGCGTACTCTGTAAAGCGAACAATAGTGAAGCATTTGCGAAGACGGCACAACCTTAAAGGCACAGAGATAAACCTCAAAGATTTCTATATACGCTTAGACCCGAGAGATTGTAAACTAGACCTAGACGAACAAACAATGACCAGCATCTTTGGGCCCCCGAAGAAAGTATTAAAAGACGTAATTATAGGTAAATTTGTCGCTGTCAATGAAAAGGTTAAACTCAACGTAAAACCTACCAGCGAGCAGGGTGAGAGTTCCGAGAAAAATGACAAGCCTGGTGAAGTTTCGGATAAATCCTCGGAAAGTGATAAAGAATCTGAGGGTGACGCAACGCTTATACCGACGAACTTGATAAAAAAAGAGCAGGACGGCGATGGTTACGGTGATGATTTAGAACCGACAGATTTTGTCAGCGTTAAAATAGAGCCAATGGACGAGGACCGCGATGGgtattga
Protein Sequence: MSSEESDDEPLSVLAANKKLNPEKFPDIILPSEIVLETKKKKKKFKPLKNTPLTIQLHKKLANVLAPPVIERPTDVWLYLKDLNPNGPYSCLLCPDWFINRSKIIIHYVLNHKKDFCGICRYFVPDRQAWWAHVQFHTPWPCSQCIENFVTENALRQHLSSAHNLVHCRLCHFRVSADDQYNTHLYQKHNVSNVSSKDDEVLWQLDSQDDTKFTCLLCLRSSNMTRLFFNHYMGYHHFTLKCFTRIISGRDPPFLVYGADVSSEFVESQLKIRTKHGYLDLEKSSVECNDTVPTTHFETETIIEVKEEVFTDSEEAQCNGNVYKVEFRNTELNTNNHNGDNELTKTYKGEEDFDVTLMEIIMFHKGYLDYVNKILNDIKLSLMPKISYVDYEKFPIDVISDIYCSLCKTKHSTTNEYSHHMTKMHSVKCLPSFSCRVCSLSFESQTELESHISQELSDFDDLWLCQFCDKEFLNREVSRLHLTEHWDLIEYDNCFSPHLGFKCKYCPTLFWNEPDRESHQVRIHFNKYKEEYYKCDSCNEFYSDKMWFVHHHVTKHQNIEEDLPLYLLKCCLCFFVLSNVEEMRSHFQTSHPEAKKVFCSLNPCKYKPLSQRKSFKIHLKTIHNRIAKPSRVITCTLCSREFSSVRAISAHMGKVHGPGKFKCKICKEALQTADERKLHYLIRHPGQHPFECNVCGKSFQYKSSLYMHKQDHVPNKKSFTCSYCKKVFVKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACSQCPRTFADKGACNSHTRTHSKDTSYACMYCGQTFVQKSKLTYHIRKHTGENLETCSVCSKLFTSACSLREHMKVHNVNKKMVKCPLCDRKYQDERYMLRHLRTSHAQTQFNCPLCPKTLTSPAGLRHHVLTHSGLKTYNCKICPKAYSVKRTIVKHLRRRHNLKGTEINLKDFYIRLDPRDCKLDLDEQTMTSIFGPPKKVLKDVIIGKFVAVNEKVKLNVKPTSEQGESSEKNDKPGEVSDKSSESDKESEGDATLIPTNLIKKEQDGDGYGDDLEPTDFVSVKIEPMDEDRDGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01316662;
90% Identity: iTF_00187461;
80% Identity: -