Basic Information

Insect: Automeris io
Gene Symbol: pita
Assembly: GCA_036320925.1
Location: JAUDJH010000037.1:333114-353107[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.19 14 7.0 0.6 3 23 217 238 215 238 0.93

2 10 0.0018 0.14 13.4 2.0 3 23 245 265 244 265 0.97

3 10 0.00013 0.01 16.9 2.4 1 23 271 294 271 294 0.96

4 10 0.072 5.5 8.3 0.1 3 23 302 322 301 322 0.98

5 10 1.7e-05 0.0013 19.7 0.4 1 22 330 351 330 353 0.90

6 10 0.0083 0.63 11.3 1.1 1 23 359 381 359 381 0.99

7 10 0.00011 0.0086 17.2 8.1 1 23 387 410 387 410 0.98

8 10 0.0044 0.34 12.2 0.2 1 23 428 450 428 450 0.95

9 10 0.011 0.85 10.9 0.0 2 23 456 477 455 477 0.96

10 10 0.00018 0.013 16.6 0.2 1 23 483 506 483 506 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.19	14	7.0	0.6	3	23	217	238	215	238	0.93
2	10	0.0018	0.14	13.4	2.0	3	23	245	265	244	265	0.97
3	10	0.00013	0.01	16.9	2.4	1	23	271	294	271	294	0.96
4	10	0.072	5.5	8.3	0.1	3	23	302	322	301	322	0.98
5	10	1.7e-05	0.0013	19.7	0.4	1	22	330	351	330	353	0.90
6	10	0.0083	0.63	11.3	1.1	1	23	359	381	359	381	0.99
7	10	0.00011	0.0086	17.2	8.1	1	23	387	410	387	410	0.98
8	10	0.0044	0.34	12.2	0.2	1	23	428	450	428	450	0.95
9	10	0.011	0.85	10.9	0.0	2	23	456	477	455	477	0.96
10	10	0.00018	0.013	16.6	0.2	1	23	483	506	483	506	0.97

Sequence Information

Coding Sequence: aTGGAATCGAGAAAAGAAACATTAAGCGAGCTAAAGCAGTGTCGTTTCTGTCTATCTCAGGGTGAAAATCTAACAAGCCTATACAAGAGAAACAGAGTCATCAAAAATGCAGCATCTCTACcgttaaaaatattgtcttgTGTTTCTGTTGAGATATATCCATCAGATAAGATGCCACGATTCATATGCAGTCGGTGCAAATTTTTCAtggatatattttatgaatttaaaaacatttgtcGACAAgctgatgaaaatatattgCATTATATTGAAAATGGAAACCCTCTGGGATCAATATCATGGCCTACTTCACTCATAAAGattttccGAGCACAATCCAAGCAACCTGAAGTAGCTGTAATGAAGGCAGTAGTGGAAAGTGGTGCTACAGTTCAGGTAACCACACAAGATGTCTCGGATACTGACATGGAAGATgatgaaaatgtttataatattaagATAAGTGATGGATCTGATGATGGAACAAAAAGTGCTCGCATCAAGGTTATCACTGGGAGTGATAAAGAAGATTTGacaaaaacaaaatctaaaAGATTAAGAAAAGTGATCAGATGTAATGCAGATTCGCAAGAAAGCGACAAGTCGCCGGGCAAGACAAATGAAATTGATGAGGGATGTTGGGCCTGCGATGAATGTGACTGTACCTATCCATTGCAACAACTATTGGAGCTTCATAAGATGCAAAAACATAGATTCAGGAACGCTCATTGCAACCAGTGCGATGCtaAATTTTTCACGAAATATGACCTGGCGATACACCAGTTAAGACACTCAAGCGAAATGCTTTACCAATGTGTTATTTGTGAAAAGAGATTCAAACGGCATATAATGCTAAAGCGACACGAAAAGCTCGTACACTCAGATTTACCTCAGCGTTTATGTCTGAAATGTCCAGCAAGTTTTCTCACTTTGGAGGAACTAGAAGCACACCAACAAAAGCACGTGCGTTTTCAACCTAAACCGTATATTTGCACCATATGTGATAAAAAATTTCCAGAGAAGTCAAGCCTGCAAAGACACAAAGTTTTGGTGCACGAACAAAAATCTACATTCAAATGCGAATACTGCCCAGAACGACATGCGACAGTATCGAAATTGGCTAGACACGTCCGTTCACATGCCGGTGACCGCTCTTATCCTTGCAAATATTGCAATAAGTCGTTCATGAAATCTCATCACTATACAAGGCATTTGCGCATGAAACATCGAGAAATAGTTAGATCACGACGCGGCCCATTCGGCGAACAGGAGCAACAGTTCAGGTGCGACCAGTGCGAAGACTCATTCAGCACCCAAGACGAATTGATATACCACTCCGCTATACACGCCACTCAAAACCTCATTTGTCCACTGTGCCAGGAGAAATTCGGTGACGTCGACGCTGTTACAGCTCACATAAAATCTCACGTTAACGGAACCGAATTTATGTGTGATTATTGTGAATTGATATTTACAACGAAGGAAAAACTTGATAATCACATTATAACTGCGCACGAAGATGAGCTACGTAATGAGGAAGTGGATCTAGAATCATCAATGGATATGGATGGAGATGACGACGAGGAAGATACTGCAATCAATGttacAGAAGAAAATGGGGAAATGattgttcaaataaaaaaacctaacgAATTCacgATTTCAAATTATAAAGGGGAAGTAGGGGATAGAGCGGAGATGACAAACTCTGAAGAGAGCGAACCTGAAACTTCATACGCAGATATGATAACTGTGGAGCCAACGGATATTGTAAAGAAAGAAACAGAGTCATCCGACTTGACTATCACAAAGCTACCAACTAGCACCGTTGTGAGTAAACGGATGATTAATAATGTCAACAAATCTGAAAAGAACGAAACTCAGGCGGCGAGTATCGTTAAAAAAGTGGATGAAGTGAAACGAAAAGTTGTGGACCAAAAAGCACCTGATCCaactttaaacaaaaaagagaaATCAATGAAAACGGAAAATAATAACACTGGCGCTAGTGAGAAATCTTTACGCTTGTTAGAAAAAGAATTGCAGGATCTAAAACGGACCAATTCACGGAGTGATTTAGTGAAACCCCCGAGTAAAAACACAGACACTGTTAAAAGTCGGAGACAGCCAATTCACACTTCCACACCAAAAATAAGATCAACAGGAGGGAAGGAGATACAGCAGAATAAGCCAActacaatagaaaaaaaagcaCCTGAACGTCGTTTGATCACAAAGGAAAACAAGGAACCTAAAGACGTTAAAGAATTAAAGAACAATAGTATAAAGGATGATAAAGAGAAAGAGTCGACAGAAAAAGAAATGaACGTCATCAAAAATGGATCCGGTGACAAAAATGGAAAAGAAGAGAGAATTCGGCGATCAACACGGCCCTCTAAAATAAAGGACTATGCAAAAATGATCCGAGATAGTTCGCAAGAGTCCAGTGAAACAGACGAGGACTCCGACGAACAAGACAATGAAGATGCGGACGAGGAATTCAAAGAAATTGAAAAATTACCCGAGCCGCGTCTAAGGCAACGGAGGGCCAGTGTAAAGCAGCAACCAGCTCCGAAGCCGGCGACAGTGACCACCGTGCCCCGCAAACGTGGCAGACCAAGAAAAGATGCAAATCAACAAGTGCCAAACAAAGTGAAAAAAGAAGATAATGAGGTGAAATCTACAAAGATGGATCAAGATACCATCAATACCAAAGATTCTAATATAGCTAGTGAACAAGAAAGTGAAAACAAAGGAAGCGGCCGAGAAACTACTAATGCGGACACAAGCATGTCAACAGGTGATGGTTTAACGTCTTCAGTTCCCACTCTAAAGAAAGTACCTATCAAAGCCCTTCCTCCTGGCGTGAAACCAATGCCTTTGCCGGCTAATGCACGATTGGGGAGCGGTGAAGTATGTGAAATGCAAATTGGAAAGAAAATGGTAAAAGTGCAGAAAATTGTAATGACCAAAGCAGAAGTCGAAGCGATGGCGAAGAAGGGTCTTGTCGAATTGAAGGACGGTACGATGGTTTTGAAACAGGGTATAAGTCCCGCTGCTGTGAAATCTACTCTAGTCAGCGAAGCAGAAAGTGAAAAGGAATCTCCTATTAAGAAAACTAAAGCTACTCCCACACGGTGCGACTTAGGAGATGATGTGTGA
Protein Sequence: MESRKETLSELKQCRFCLSQGENLTSLYKRNRVIKNAASLPLKILSCVSVEIYPSDKMPRFICSRCKFFMDIFYEFKNICRQADENILHYIENGNPLGSISWPTSLIKIFRAQSKQPEVAVMKAVVESGATVQVTTQDVSDTDMEDDENVYNIKISDGSDDGTKSARIKVITGSDKEDLTKTKSKRLRKVIRCNADSQESDKSPGKTNEIDEGCWACDECDCTYPLQQLLELHKMQKHRFRNAHCNQCDAKFFTKYDLAIHQLRHSSEMLYQCVICEKRFKRHIMLKRHEKLVHSDLPQRLCLKCPASFLTLEELEAHQQKHVRFQPKPYICTICDKKFPEKSSLQRHKVLVHEQKSTFKCEYCPERHATVSKLARHVRSHAGDRSYPCKYCNKSFMKSHHYTRHLRMKHREIVRSRRGPFGEQEQQFRCDQCEDSFSTQDELIYHSAIHATQNLICPLCQEKFGDVDAVTAHIKSHVNGTEFMCDYCELIFTTKEKLDNHIITAHEDELRNEEVDLESSMDMDGDDDEEDTAINVTEENGEMIVQIKKPNEFTISNYKGEVGDRAEMTNSEESEPETSYADMITVEPTDIVKKETESSDLTITKLPTSTVVSKRMINNVNKSEKNETQAASIVKKVDEVKRKVVDQKAPDPTLNKKEKSMKTENNNTGASEKSLRLLEKELQDLKRTNSRSDLVKPPSKNTDTVKSRRQPIHTSTPKIRSTGGKEIQQNKPTTIEKKAPERRLITKENKEPKDVKELKNNSIKDDKEKESTEKEMNVIKNGSGDKNGKEERIRRSTRPSKIKDYAKMIRDSSQESSETDEDSDEQDNEDADEEFKEIEKLPEPRLRQRRASVKQQPAPKPATVTTVPRKRGRPRKDANQQVPNKVKKEDNEVKSTKMDQDTINTKDSNIASEQESENKGSGRETTNADTSMSTGDGLTSSVPTLKKVPIKALPPGVKPMPLPANARLGSGEVCEMQIGKKMVKVQKIVMTKAEVEAMAKKGLVELKDGTMVLKQGISPAAVKSTLVSEAESEKESPIKKTKATPTRCDLGDDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -