Basic Information

Insect: Automeris io
Gene Symbol: -
Assembly: GCA_036320925.1
Location: JAUDJH010000011.1:14101703-14108643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.8e-06 0.00029 21.8 1.7 1 23 212 234 212 234 0.98

2 9 3.6e-08 2.7e-06 28.2 1.6 3 23 242 262 240 262 0.98

3 9 0.00012 0.0093 17.1 0.3 1 23 268 290 268 290 0.98

4 9 1.3e-05 0.001 20.1 1.7 1 23 296 318 296 318 0.99

5 9 2.7e-05 0.0021 19.1 1.7 2 23 494 515 493 515 0.96

6 9 3.5e-09 2.7e-07 31.4 1.6 1 23 521 543 521 543 0.98

7 9 0.003 0.23 12.7 0.6 3 23 551 571 549 571 0.97

8 9 7.6e-05 0.0058 17.7 1.5 1 23 577 599 577 599 0.99

9 9 0.023 1.8 9.9 0.8 1 23 605 629 605 629 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.8e-06	0.00029	21.8	1.7	1	23	212	234	212	234	0.98
2	9	3.6e-08	2.7e-06	28.2	1.6	3	23	242	262	240	262	0.98
3	9	0.00012	0.0093	17.1	0.3	1	23	268	290	268	290	0.98
4	9	1.3e-05	0.001	20.1	1.7	1	23	296	318	296	318	0.99
5	9	2.7e-05	0.0021	19.1	1.7	2	23	494	515	493	515	0.96
6	9	3.5e-09	2.7e-07	31.4	1.6	1	23	521	543	521	543	0.98
7	9	0.003	0.23	12.7	0.6	3	23	551	571	549	571	0.97
8	9	7.6e-05	0.0058	17.7	1.5	1	23	577	599	577	599	0.99
9	9	0.023	1.8	9.9	0.8	1	23	605	629	605	629	0.95

Sequence Information

Coding Sequence: ATGCATACGTTTACATTGTTTTCAGATACGACAGCACCGTATGTCCTCTACAAAGATGGCGTGGAGCGCGCCCCGCCCGGCACGCAGTGGGGCGGTGGGATGTTGGACGGCGGGTACCAGCCAGCCGGCATGCAGCACCAGAGCCCTGGAGGACCCTCGCCCCAGCCGGAGCCGCAACTCGCCTCCCCTGCTCCCTCCCCCTACCCGCCCGCGCCGCCGCCTCCCGACCAGACAGGCGCGGTCGACGACGCTCAGCAACTCGCACAACAGCAAGCTCAACAACAACAACAGCAGCAACAACAAACATCACCAGAGCACATGCAAGTCGAGCAGCAACTCCAAACGCAACCGCAACCACCTCCACAAGACCACCTGGACCGAACGCCGTGCTTCGTACCTCAGCCCGACCTACAGCAGCAGTACACTCCTTACTTCAAAGAGACGCGTCCGACAAGCCACATGCTCGGCACTGGCGGATTCCCACTCCACTATCTAAAGCAGAACGGAGGCGTTCTTTCCCTGGAAGGCCCGCTAGATCAGTATGGAGCGCCCGACCTAAGGCATCTCCCGGACATCGTCCAGCCGGAGCCACCCAAACCGCGCAAACACAACCCCAACGCTGAGCTGCGTCTGTTCAAGTGCCTGACTTGCGGCAAGGACTTCAAACAGAAGTCGACTCTGCTGCAGCACGAGCGGATCCACACAGACTCGCGGCCATACGGGTGCCCGGAGTGCGGCAAGCGGTTTCGGCAGCAGTCACACCTGACCCAGCACCTGCGCATCCACGCGAACGAGAAGCCCTACGCGTGTGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCATCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCTCCTTCCAAGTCCCGCGTGCGCCGCCCGCATTGGCCAGCCCACTGCCGGCGTCGCCCGCGCTCCTGCCGCCCCGCACGTTCGTTTCGGTCTCGCATCCATTGGCCATCCTGTCAATCAAATTCTCGGTCCCTCGTCGCCGCCAGCCGCCTGGTAGTGCCGCCGCGAGACGCGCAACCGACCGCCGGACGATCCTATGTTTCGCCCCACCTGATCTTCAAGAACGGCACGACACCGACTCTTTGGCCGCAAGACGTGCCTTTTCCGCCCGATGAGAACAAAGAAGAGGTGCAATCCAGTTTCGGGGATGGAGATGGCCAGAATGGCGACCCACGCGGCTCATGCTTCTCGCCAGGAGACACTGCGCAGTATCCTGCGTACTTTAAAGATACAAAAGGCCTCAGTCACACTGTTTTCGGGTCTGGTATTTCACTACAATATCTTAAAGGGGGCAAATTGCCAGATGTTTTAGGAGGCAGAGCCATGCCGCTGTACGTGCGGTGTCCGATCTGCCAAAAAGAGTTCAAGCAAAAGTCGACGCTGCTTCAACATGGATGCATCCACATAGAGTCACGCCCATACCCTTGCCCAGAATGCGGTAAACGTTTCCGGCAACAGTCGCATCTAACGCAACATCTCCGCATACACACTAATGAGAAACCATATGGTTGCGTATACTGCCCTCGTTTCTTCCGTCAACGAACCATTCTCAATCAGCATTTGCGTATACACACCGGAGAGAAGCCATACAAATGCACGCAATGCGGTAAAGACTTCAGGCAAAAAGCCATCTTGGATCAGCACACGCGGACGCATCAAGGTGACCGGCCTTTCTGTTGTCCGATGCCGAACTGTCGGCGGCGGTTCGCAACCGAGCCAGAAGTAAAGAAGCACATCGATAATCACATGAACCCGCACGCGGCCAAGAGGCGTGTGGACGCTGCAAAAACACCTAGGCCGTTGCCGCCGGCCTCAGCAGTTGTGAAGCCAGAGTTGTACTTCCCGCAATGCTACGCACCGCCGTTCCAGCAGTATGGGGCGACGGGAGGAGCGGAATTCAAGCCCACAGTGGGACCGGCGGGAGGCGTGACTTGCCTGCCGGCGCAGTGA
Protein Sequence: MHTFTLFSDTTAPYVLYKDGVERAPPGTQWGGGMLDGGYQPAGMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQTGAVDDAQQLAQQQAQQQQQQQQQTSPEHMQVEQQLQTQPQPPPQDHLDRTPCFVPQPDLQQQYTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYGAPDLRHLPDIVQPEPPKPRKHNPNAELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPSKSRVRRPHWPAHCRRRPRSCRPARSFRSRIHWPSCQSNSRSLVAASRLVVPPRDAQPTAGRSYVSPHLIFKNGTTPTLWPQDVPFPPDENKEEVQSSFGDGDGQNGDPRGSCFSPGDTAQYPAYFKDTKGLSHTVFGSGISLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKRRVDAAKTPRPLPPASAVVKPELYFPQCYAPPFQQYGATGGAEFKPTVGPAGGVTCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428362;
90% Identity: -
80% Identity: -