Aio006789.2
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000006.1:13536456-13545112[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0052 0.4 11.9 1.1 3 23 271 292 270 292 0.96 2 23 0.32 24 6.3 0.3 1 22 680 701 680 701 0.95 3 23 6.3 4.8e+02 2.2 0.3 1 22 742 763 742 765 0.82 4 23 0.0023 0.17 13.1 1.8 3 21 776 794 776 795 0.96 5 23 0.24 18 6.7 0.1 2 23 803 825 802 825 0.89 6 23 0.012 0.93 10.8 0.2 3 23 846 867 844 867 0.96 7 23 0.0012 0.093 13.9 2.8 1 23 873 896 873 896 0.96 8 23 0.12 9 7.7 0.0 1 23 922 945 922 945 0.90 9 23 0.0052 0.39 11.9 3.5 1 23 950 972 950 972 0.97 10 23 0.0077 0.59 11.4 0.1 1 23 978 1001 978 1001 0.95 11 23 0.00098 0.074 14.2 1.3 1 23 1014 1036 1014 1036 0.98 12 23 0.00017 0.013 16.6 1.8 1 23 1085 1108 1085 1108 0.97 13 23 0.012 0.88 10.8 2.9 1 23 1167 1190 1167 1190 0.97 14 23 0.00087 0.067 14.4 2.0 2 23 1218 1240 1217 1240 0.95 15 23 0.037 2.8 9.2 0.1 2 23 1246 1268 1245 1268 0.94 16 23 0.0093 0.71 11.1 0.2 1 21 1311 1331 1311 1332 0.95 17 23 0.001 0.076 14.2 0.8 1 23 1342 1364 1342 1364 0.93 18 23 8.3e-05 0.0063 17.6 0.3 2 23 1452 1474 1452 1474 0.93 19 23 3.1e-07 2.4e-05 25.2 1.4 3 23 1481 1501 1480 1501 0.98 20 23 0.015 1.2 10.4 0.9 1 23 1520 1542 1520 1543 0.93 21 23 0.33 25 6.3 0.0 1 23 1564 1586 1564 1586 0.97 22 23 0.012 0.88 10.8 0.9 1 23 1592 1615 1592 1615 0.95 23 23 0.00029 0.022 15.9 0.7 1 23 1623 1646 1623 1646 0.96
Sequence Information
- Coding Sequence
- atGGATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGCGAATTACAACCGATTTTTGCTACCACCAGTTCGGATGACACGGAACCTCCCGTCCTCGCTTCAAAAATTAAGGATTGCGTGTCCATACAAATAACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGTGTGGACAATGTCAATAACTGGCATATATTCAAGAGTGTCTGTGAAAGGGCACAAAACAAACTACAGTCTCTGATAAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATTAAAAGTGAACCATTTTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATACCCTGATAATGAGAACGCAGGCCCCAATAAAGTTCAGCCAGAAGGGCCCCCAATCTTAGCTTCTTTGGGGCTCACACCACGGAGTGATAAGACCTATGTAGACCCCAGGATGGACTGGCATCGGGTACATGCAATATTGAACATGGTACAAGATGATGAAATTATTAATTCACTTCAGCTTACGGAGGAATGTGATATACTACAATTCTCTGATCATGATTCTGAAACAGACTCTGAACTTCAACCTGATATTGATGACGCTTTTTTTGATTGCAAAAATGGTTACGGCGTTGAAAGCGAGAAGGACGAAGAAGATGATGAGGAAGAAATTAACGATGGCTCCGAAGTGTTCAATAAAGTACCAAATATGCCAGAAGTATCAATCACAGTCATGCGTCCTTCAGGAGAAACATTACATGCACGGCAAGGCATTCAACAATTAGCTTCTAAAGATTGTCTCGTTTGTGGTCGTACGTATCGTTATTCGCATAACGCCAGGCGACATGAGCTCACAGCTCATAGTTTTGATAGGTACACAAATAAAgtcacaaacaaaaaaacacacTCGCATAAGCATCTAAAACTAAGACCAAACCCTTTTAATCCGAAAGCACGACTTATGCCTAATCCTATCAATCATAAAATTCAATTTCTCCCCAAAAATATCCCAGCTAAAATAATGCAGCAAAAAATAATTACCCCACCGAAACCAATACCAATTAAGACAGTTAAAGTACCGCAAAATAATTTGCCCTATCCATTGAGGATTAAAGCACTGAAagatttacaaattaaaaagaaagaacCTCAGATTTTGAAAACATTATTAACTTCAAAGCCGGAAGTTTTAGTTTCGGAACCTGAAATTTTAAATTCTGGCCCAGAAAGTCCAGAGACACTGATATCGGAGCCAGAGATTGCATCCTTTCAAGTAGAGGCTATATTATCAGAACCTGACCCAGATGCTTATGATCACCATCAAGACTATGAACAAGATGGTGAAATGGAAAATAACCAAGGTCAGCATTATGATACAGTTGATATGGATTCAgaaaatgaaatagaaataGCTCGCCAACAAGAGCATGCATCAGAAGGCGAAGATCAAAATGAAATGGAAGAAAATATCCACCATGATGATAATATGGAAGAAGGACATAGTGACAATGAGAAGGAGCCCAATGACGAAAATAGTGAAAGCCAGGACAATATGATTGCTAATGATAATACAGAAATCAAAACCGAAGAGGAAGCCAAAGAAGAAGATGAAGGTAATGAGGAAAAGGATCACGAAAATGAAGATCAAGATATAAATCATGATGAGAATGATGATGAAGACGAAGAGCTCCCTCCAATTGGTTTAGCGCCTGTAGTTGAAATTACTGAAGATATGCAAGCTAATTCATTCATGAGTGAGCTTCAGGATGAGGACCGTGAAGATGACCCTGACGAGACAGCGGATCCTAATGAAAAtattgaagaagaagaagaagaatcaCCGGAAAAGGAACTTGACCCTGACAAATTGTATGTGACCAAAACACAGAGAGATTTCATTGCCAAGTACCGTGACATAatagaacaaataaatacaaaacgttGCTTATGTTGTGATAGAGAACATCCTCGTAGAAAAGCTGTCATTCAACATTTACAGAAAAATGGTCACAAGGTTCCAAAACACACTTGTTACAATTGTGTAGTAACATTTGGACACATTGGCGCACTACTTAGTCATATGAGATCAAATTCATGTACTGACCtttggaaaataatatataacgaAAACGGTATAACTGATGATTTGGTTCTAGAGAATGAACAAAAGGCGAAGGTCCAATACAAGGATATTTTCAATGCCAGGTCATATGCCTGTAAATTATGTCCAGcgaaatttcaattaaaacagTTTATAATGAAACATGTGTTGGATGTTCACGAAGATGGACAATCCAGGGTACCCTTAGGATGTGTGCACTGTAGAGCTAGATTCAAAGACAAGAGTTTACTAAAGAAACACATTCGTAATGGAGaatgtactgtttatatttcttGTGATTTATGCTCAGAAAAGTTTAGAAACATTCAAGATTTCAATGATCATGCGTTGGCTGTACATGCTGGTAGTTTTGATCAATCAGATACTGCCAGCAAGTGTGTTGACGGACGTCCTACAGATTGTCCTTTATGCGGAAAGAAAAATAGCAACTATCCAAATTTGgtaaaacatttgaaaattattcATAGTGAAGAAAAACCTCATTACTGTCAACATTGCGATTCTAAATTTGAGCAGGCTGCTGATcttaataaacacatttacaCAGAACATTCCGATAGAACTCTGGGTATGCAAAGCAATGAGCCTGATATGTCACTAGTTAAAGAAGAAGCAGAGGAATACCATTATTCATGCACAGAATGTAACGCTATTTTTGAAACCGTGGATGCTTGGACTGATCACCAAGTGGCCGAACATAACCAAGTCGCTCATCACTGCGACCAATGCGACAAGAAATTTTTACGTCCTTCAGAACTTGCTGAACATAAGAATACTCACTTACGTGTCAAATTTTACCCATGCAGTGTTTGTCCTAATTCATACAGCACCCCACAAAAACTGTCAGAGCATGTCCAGCAGGCACACCCGGGTGTGAGCTCGCAGGCGGCTGCAGAATCTGAATTTTACTGTGATATTTGTATCAGGTCGTTTAAAAGTCGTCAAGCTTATTCTAATCACATGCGTATTCATGCAAAAGTACCCACCACGAATAGAAAACCTGGAGATCCTAAAGGATTCGCACCGCAAATTATCGGAAAACCAGTAAAACAGTTTTCTATGGTTCAACCAGGTTTCGTTTCGTTTAAACCTAGCTATAATGTCCCTAATGCTCCATATTCTTGTGATATTTGCGGCAAAGGATTTATGCATAAGAAGAATATTTGGAAGCACAAAAAAGTCTTACACGCCGATCTCATTAGTGATCGTAATGATAGTGAAGAAAATACTATGCATGCATCTACTGAAGAGGAAGAATTTAACTTTGAAGAGAATGGGGGATTGTCAACGCCACAATTTAATAGCTTCAATTTTACTAACTTTGTTAATAGCACTCCTCAAGCTCAACCAGAGCCTATGCCATATTCTTGTGAATTGTGCTTCCAACGATTCACTCTTAGAACCAGTTTGTGGAAACATAAACGTAATAGGCATGGAATCATAAACCCTAACACTGGAGGTAGTTCTGATTCACAATCGCAAGGTGGTGGAACGGGTGACAATAGTAGCAGATCAAGCTGTACCATCTGCAAAATATCGTTTAGTGACAAGAAGTCCTACTATCGTCATAGAAAGAATGTGCATAAATCTTCTGTACAAATGTGTAAAATATGTGGCAAACCTCTTAGCTCGACACTTGAGCTGTATGAGCATTTGAAGGCTGCTCATGCAAGAGAATTGTTGGGTTTTAATGCTAACCAAGGTTCAAGCAAAACACAAGATATACCGCAAGAAGAACCCGAGTATGAAAATGATCAAGAAGCCGTGGACCCGAGCGTAGACTATCAGGCTCGGTATCCATGTGATACTTGCGGCAAACAATTTGTTGGATTGCTGGCACTTCAGAACCATCAGTGTATAAATCAATTGCCTTCACAACCTCAAACATTTAATTGTGAGATTTGTCATAAGAGTTACACGTCAATAGCAGCTTTGAAAAGTCATCGTGGATGGCACTTACGGTCCCCGGACGGCAAAGCAGCCGCTAACAATTCTGGACTTTGGATGCCTCAGCACAAAGTTACAAGCAAAGTTAGTAAACACGAGGTCGTTGAAAACATACCATCTCCACGAGTTCAACAAACGACTCCCGCTTCCGTAGCTAAAAGAAGACTTCCCCCTGAAGTAGAAGTGACTGTTGTGAATCCCAACAAGAAGTTACGATCAGACGATTCAATCGAACTGGACCAGCAAAGTGCTGGCGCTTTGGAAGACAGATATTGCAATATTTGTGACAAAGAATTCACCAAACGCGCCGCATATCAGCGGCATATGGATGAGGTGCACCAACCTAATTCCGTATTTTGCCCAGTGTGCGATAAAAGTTTCACGCGCAAGTCGACCTTGCTTGTTCATATGAAAAAGCATTATGAAAGCGGAGAAGGCAGTTCCAATGCGTTAGCCCAATTGGAAGAGGAGGTCCACGCTTGTGATCTGTGTGGAGCTCAGTATGACAACGCCAAAGCGTTACAGTCTCACCGAGCCAGACATCACGGGGAAGAGTCCGGCGAATCTGAAGATGAGGGGAATGTACCGATACAACAACCTGGGGAATTTACATGCGCGCAATGCGGTGATGGTGTTGCGACTCCCCGTGATTTGATAGCCCATCGCGTCATGCACGCGACGCCTACAAAATTCTTCTGTAACATTTGCAAAGTGTATTTTTCGAGAGCTCTGGACTTGTCATCGCACACTAGAGCGAGACATGCTGACAACGAGAAAGTATTTTTCCCATGTGCCATGTGCGATCGTTTCTATATGAACAAAAAGAGCTTGCAAAGACACATCGAGATGTCCCACTGA
- Protein Sequence
- MDVNYDRVCRLCLSSRSELQPIFATTSSDDTEPPVLASKIKDCVSIQITENDDLPTNVCRKCVDNVNNWHIFKSVCERAQNKLQSLINKDGSQLEEVKIKSEPFSDEAYDDGVVIDGSYPDNENAGPNKVQPEGPPILASLGLTPRSDKTYVDPRMDWHRVHAILNMVQDDEIINSLQLTEECDILQFSDHDSETDSELQPDIDDAFFDCKNGYGVESEKDEEDDEEEINDGSEVFNKVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKVTNKKTHSHKHLKLRPNPFNPKARLMPNPINHKIQFLPKNIPAKIMQQKIITPPKPIPIKTVKVPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDPDAYDHHQDYEQDGEMENNQGQHYDTVDMDSENEIEIARQQEHASEGEDQNEMEENIHHDDNMEEGHSDNEKEPNDENSESQDNMIANDNTEIKTEEEAKEEDEGNEEKDHENEDQDINHDENDDEDEELPPIGLAPVVEITEDMQANSFMSELQDEDREDDPDETADPNENIEEEEEESPEKELDPDKLYVTKTQRDFIAKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLENEQKAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLGCVHCRARFKDKSLLKKHIRNGECTVYISCDLCSEKFRNIQDFNDHALAVHAGSFDQSDTASKCVDGRPTDCPLCGKKNSNYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYTEHSDRTLGMQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQAHPGVSSQAAAESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPVKQFSMVQPGFVSFKPSYNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLISDRNDSEENTMHASTEEEEFNFEENGGLSTPQFNSFNFTNFVNSTPQAQPEPMPYSCELCFQRFTLRTSLWKHKRNRHGIINPNTGGSSDSQSQGGGTGDNSSRSSCTICKISFSDKKSYYRHRKNVHKSSVQMCKICGKPLSSTLELYEHLKAAHARELLGFNANQGSSKTQDIPQEEPEYENDQEAVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFNCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVENIPSPRVQQTTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIELDQQSAGALEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSNALAQLEEEVHACDLCGAQYDNAKALQSHRARHHGEESGESEDEGNVPIQQPGEFTCAQCGDGVATPRDLIAHRVMHATPTKFFCNICKVYFSRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -