Aio004203.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000004.1:10337422-10339827[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-09 2.2e-06 27.9 0.2 5 38 17 50 15 57 0.76
Sequence Information
- Coding Sequence
- ATGGAATCTTCAGTTAAAAAACCTCGAGGACTTTGGACACTACAGCAATTAGAAGCTGCAATGACAGCAGTTAATGGAAAAATAATGTCACAACGTGCAGCTGCAGCAAGATATTCAATTCCTAGAAGAACTTTGGTAAACCATTTAAAGTCAGGAAAAATTGAGAAACAAATCGGGCGTCGTACAATTCTAACTGCTACGCAAGAAAATGATTTAGCGTCAAGAATCAAAAGGCTTGCCTCTATAGGATTTCCGTTAACTCCAAAAGTTATACGTCATCAAGCTTATATATTTTGTGAACATCACGAAATTCCAAATAGCTTTAATCAAGCAACAAAGCGGGCTGGTAAAGActggttaaaattatttttaaaaaggcaCCCCGACATATCAAAGCGTAAGGTTCAATTCTTAAACCCAGGTAGAGCGCAAAAACTAAATAAGACAATTGTTATGCAACATTTTTCAgagtataaaaagatatatgAAGAGTTACAGATTGCACATCATCCGGAACGCTTGTATAATATGGACGAAAAAGGCTGCCGTCTTACCATACACAACCAACCAACAGTATTAGCTCAAAAAGGTGCTAAAAGGGTGCATATGGTTGCACCAGAACATGCAGAGAATGTTACTGTAGCTGCATGTGTAAATGCATTAGGTAGTCCAATTCCTCCAATGATATTATTCAAAGGGAAAAGGTTGAAACGAGAATTCAATGATAATTTGCCTGCAGGATCGCTCATCAAAATGGCACAAAAAGGCAGCATGACATCATTACTGTTTATAGACTTTATACATCACTTAGGGAAATATAAATCGGCTGGAAAATGTCTTCTGGTTTTTGATGGCGCTTCATGCCACttagattataaaattgtaGATGCAGCCGACCAACATGATATAGTATTGTACTGTTTGCCATCAAATACTACACATGAGTTACAACCTCTCGATAAAAGTGTTAACAAATCGTTTGAACATCATTGGGACGATCAAaccttattatttctttatcaaAATCCTGACAAGAAATTAACTAAAGCGCGATTCAAATGCATATTTAGTGTAGTCTGGTCAAAATGTATGACTCTCGATAACATAGTGAACGGATTCAGGGCTACAGGATTGTATCCTTTTAATCCAAATGCAATACCAGAAGAAGCATATGCACCTTCTGTACTGACTGAAAAACCTGCGGGCACAATAGAAATAACGACAGAAAATAAACGATCGCAAGAATCTACTAATAATGGgcataaagttttaaattcATACACCGCTTTGCAGAGTCCAAATAACGATAGTTCAGATTCCGAGAAGacatttatagaagaagaagaaaataacCAATCTTTGGAGAAATCACTTACTCCCGGTTCTAGCGGTTTACATTTATGTCATTCTGTGCAAAGTCTTGGAGACAATAGCTTAAATTCCAACGATACATTTTTTGAAAATCGTGATCCACAATCACCATCTTTGCTGCATCAGGATAatctattattacttttttcagCTGATTCAGGAATAAAGAGACGCTTAGTCGATTACAGCTCTTCAAGTTCTGACCTTGAAAAATCAAACTTGCCAGCAGAATCAAACAAGTTTATTACCACAACAAAACGACCTATAATTTATAGCTCCGAGTCTGATGGTTCTTTTACTGAAACACTTACTGCAAGGCCAAAACATACTTCTCAATTTTCTCATAATATATACAGTTCTTCTGATGATGAAAATATGAATCCGTTAATAAGTCAAGAACGGGcacccaaaaaaaaagtagaacaTATAAACCACAATAATCTAGTTATGCAAGTATGTGAAAGGTCATCAGTAGCAAGCTATTTAGAAGACAACTTACCATTGACAGAatcaaaagcaaaaaaagaTGAGAAATCTCCTTTTCAGCAGTTAATACCGTCACCAAATTTTGATGTGGTAAAACAAAAGAAACCAAGACGGAAAGCAATCAACTATAAAGCTCAGATTGTGACAAAAAGATTATTTTCAGAAAGAGACAAAACAGAAGAATTGAGTGGGCCACAACAGTTGAGCTCTAAAGATATGCGACAATGCCCTGTGTGTCAGAGATGGTTCCACCAGGAATGTGTAGGCTTGACAAATGAGGACATTGATTTCATATGTCCTTTTTGCAATTGA
- Protein Sequence
- MESSVKKPRGLWTLQQLEAAMTAVNGKIMSQRAAAARYSIPRRTLVNHLKSGKIEKQIGRRTILTATQENDLASRIKRLASIGFPLTPKVIRHQAYIFCEHHEIPNSFNQATKRAGKDWLKLFLKRHPDISKRKVQFLNPGRAQKLNKTIVMQHFSEYKKIYEELQIAHHPERLYNMDEKGCRLTIHNQPTVLAQKGAKRVHMVAPEHAENVTVAACVNALGSPIPPMILFKGKRLKREFNDNLPAGSLIKMAQKGSMTSLLFIDFIHHLGKYKSAGKCLLVFDGASCHLDYKIVDAADQHDIVLYCLPSNTTHELQPLDKSVNKSFEHHWDDQTLLFLYQNPDKKLTKARFKCIFSVVWSKCMTLDNIVNGFRATGLYPFNPNAIPEEAYAPSVLTEKPAGTIEITTENKRSQESTNNGHKVLNSYTALQSPNNDSSDSEKTFIEEEENNQSLEKSLTPGSSGLHLCHSVQSLGDNSLNSNDTFFENRDPQSPSLLHQDNLLLLFSADSGIKRRLVDYSSSSSDLEKSNLPAESNKFITTTKRPIIYSSESDGSFTETLTARPKHTSQFSHNIYSSSDDENMNPLISQERAPKKKVEHINHNNLVMQVCERSSVASYLEDNLPLTESKAKKDEKSPFQQLIPSPNFDVVKQKKPRRKAINYKAQIVTKRLFSERDKTEELSGPQQLSSKDMRQCPVCQRWFHQECVGLTNEDIDFICPFCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187088;
- 90% Identity
- iTF_00187088;
- 80% Identity
- -