Basic Information

Insect
Automeris io
Gene Symbol
-
Assembly
GCA_036320925.1
Location
JAUDJH010000020.1:5376671-5377018[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-09 1.5e-06 28.5 0.0 9 37 25 53 19 60 0.86

Sequence Information

Coding Sequence
ATGTCAAACGCTGAAATTGATGgcaagaaaaagaagaagggcACCTGGTGTTCTGCGAAAATGCGTAAAGTCGTAGAAAAGATCCTAAATAACGAAATGAGCGCACGCCAAGCCGCAGATCGCTATAAGGTGCCACGAACTACATTAAATGACAGATTTAGTGCTATCAAACATGATAAAGAGATGTCCATTGAGCTTATGGGTCATTTTCACAATACCTTTTCGCCTGAACACGAAATTTTTTTGGCAGAACACGTCAAAGACTTGGCTAATAGGCTAACATCTTTAAACAGAAAAGAAAGATTGAAATTCgccaatttaataaagaaaaagaatctgCGGGAATGA
Protein Sequence
MSNAEIDGKKKKKGTWCSAKMRKVVEKILNNEMSARQAADRYKVPRTTLNDRFSAIKHDKEMSIELMGHFHNTFSPEHEIFLAEHVKDLANRLTSLNRKERLKFANLIKKKNLRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-