Aio005185.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000005.1:3690139-3691319[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8 4.6e+03 -1.9 0.0 9 21 42 54 42 56 0.70 2 2 1.3e-09 8.5e-07 29.3 0.1 4 39 66 101 63 106 0.93
Sequence Information
- Coding Sequence
- ATGGCGAATTTTTCTACGCTGTTGGCTCCGCGAGCGCCCCGTGCAGCGAACGTGTTGAAACTTGCAGTCGTAAATACTAGCGACGTGAAGCACAcgcttatttttattaaattcctaCAAAGAATACATTACGTCATGGAAGACGGTACAACAGTTTCAACTGCAAAGAAAAAAAGGGCTCAATGGACTTCTCAGCAGATGGAAAACGCTGTCAAGATGGTGGAAAGGGGTATTTTATCCCAATATGCTGCTGCAGCCAGGTACAATATTCCAAGAAGGACTTTACGTAATCATTTGCGGAATGGTTCTACAATACGTAAGTTAGGTCGCTCCACTATTCTTACTACAGAACAGGAAGCTGATCTTGTCAGACGGATTATACGTTTAGCTGATGTTGGGATGCCGTTGACTGCAAAGATGTTGCGTGTACAGGCATTCTTTTTctgtaaaatgaaaaacataCCAAACAGTTTCAACGAACTCAAAAGTGTCGCGGGAAAGAAATGGCTGAGGCTATTTCCGACAAACGACATCCGGAACTAA
- Protein Sequence
- MANFSTLLAPRAPRAANVLKLAVVNTSDVKHTLIFIKFLQRIHYVMEDGTTVSTAKKKRAQWTSQQMENAVKMVERGILSQYAAAARYNIPRRTLRNHLRNGSTIRKLGRSTILTTEQEADLVRRIIRLADVGMPLTAKMLRVQAFFFCKMKNIPNSFNELKSVAGKKWLRLFPTNDIRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -