Aio003373.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- clz9
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000003.1:18433698-18434822[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-12 2.2e-09 37.6 0.0 2 40 13 51 12 56 0.86
Sequence Information
- Coding Sequence
- atGCCTGGAACCAAagcaaattttttaaattatgacgaGAATGCAATGAAAAACGCAGTTCAGGATGTGCGCCAACACAACATCTCAATAAGAAAAGCAGCTAAAAAATTTGGGGTACCTCGACAAACTTTATCAAATAAAGTAAAAGGGAAATCCCCAATGGAAAGGAAAATGGGGCCTGCTCCTACGCTAACTAAGGATGAGGAACAACGCATATGCCAGTGGGTGTACGACTCCGCTGAGGCTGGTTTCCCCATTACGACAGACCAATTGCTCTTTAGCATTCAACGGTACCTCAAGGACATTAAGCGAGAATGCAAGTTTTTAAACGATGAAAACAAGCCAGGAAAAACTTTTCTTAGACTCTTcatgaaaagaaataaagatGTAGCAACAAGGACATCCCAAAATCTCACGTCTTCAAGAGCGTCTGTGACAACCGCTGATATAAGAGAATGGTTTAATAAAGTAACGAGTAAATTAGAGGAAAAGGGTTGGGTGGACATTTTGGCCGACCCAAATCGTGTTTTTAACTGCAACGAAACGGCTTTCATGTTGGCACCAAAGACCCCAAAAGTTCTGGCTAAAAGGGGAGAAAAGAACGTCTATCAACAGGTTAACGCCGATGATAAGGAGTGCCTCACAGTTCTCGTCACTGGAAATGCGGCTGGTACCCTTGCCCCCACAACAGTATTATACCCATATAAACGAGTTCCTGCAGAAATTTCGGACAATTTTCCAGCCCAAAGGGGATTAGGGAAAACAGATTCGGGATGGATGACGTGTGAAGCGTTCTATGAATTTATAGCTGACATTTTTTACCCATGGGTTTGTTCTCAACAGGTACATATGCCTGTCATTTTATTTGTGGACGGACATAAATCGCACCTCTCATATCAATGCAGTGAATTTTGTGATGAACATGGAATAATAATGATTCCGCTGTACCCTAATGCAACGCACATTTTGCAACCGATGGACGTTGCGGTCTTCAAGCCTCTAAAACAAGCCTGGCGAAAACGGGCCCATAGTTGGCGTATTGAAAAAATCAGTAATGGCGAAAGCCACaccctaaaaaaaaagattttgccAAACTTCTGCAAGAAGTTATGGAAAGTACCGTGA
- Protein Sequence
- MPGTKANFLNYDENAMKNAVQDVRQHNISIRKAAKKFGVPRQTLSNKVKGKSPMERKMGPAPTLTKDEEQRICQWVYDSAEAGFPITTDQLLFSIQRYLKDIKRECKFLNDENKPGKTFLRLFMKRNKDVATRTSQNLTSSRASVTTADIREWFNKVTSKLEEKGWVDILADPNRVFNCNETAFMLAPKTPKVLAKRGEKNVYQQVNADDKECLTVLVTGNAAGTLAPTTVLYPYKRVPAEISDNFPAQRGLGKTDSGWMTCEAFYEFIADIFYPWVCSQQVHMPVILFVDGHKSHLSYQCSEFCDEHGIIMIPLYPNATHILQPMDVAVFKPLKQAWRKRAHSWRIEKISNGESHTLKKKILPNFCKKLWKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -