Aio011053.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000011.1:857392-869830[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-10 2.8e-07 30.8 0.0 4 39 148 184 145 188 0.89 2 4 4.8e-11 3.2e-08 33.8 0.3 2 39 200 237 199 241 0.92 3 4 3.7e-14 2.5e-11 43.8 0.0 4 45 257 299 254 299 0.95 4 4 1.4e-16 9.4e-14 51.5 0.0 2 39 307 345 306 350 0.92
Sequence Information
- Coding Sequence
- ATGACTGATCACGAGCTGACTCTAGTGAAATGCGAGCCCCCTTCTGAAAATGATGACAGCAATTCGGCGTACACACACGATTGCTTCTCGCAGCAGGATTCCGGCACATTGGAGGAGTTGCCGCCGCTGGCTCCGGCTGGGCCGGCCGCCACCCCGGTCTGCGTGAAGCAAGAACCCGCTGACTCTCTGCCAGCATTCACTCTGGAGACACTCGAGCCAGCGCCTCACAATAATGCGGGTTCTGCGCTTCTGAGCAGACACATGACATTGCAATCGCAGGAAGGTGCTAACGTCCCTGACTTTATATCCCTGATGTCGGTCAAAGACGAACCTTTATCTGAAGGAGAGCAGCAGCATTGCAGCGGCGACGACACGAGCGACTCGACCGGCACGCAGCCAGAAGTGTCCACTCGCAGCAGTCCCAAGAGCTGGAGCCAGCAAGACATGAACAACGCGCTCGATGCCTTGCGCCAGCACAATATGAGTCTCACTAAGGCTTCGGCAACTTATGGGATACCCTCAACGACTTTGTGGCAGCGAGCACATAGACTTGGCATCGATACACCCAAGAAAGAGGGGGCGGCGAAATCTTGGAGCGAGGCAGATTTGAAAGGTGCTCTACAGGCATTGCGAGCGGGGGCTATTTCAGCCAACAAAGCCAGCAAGGCGTATGGTATACCCAGCAGCACGTTGTACAAGATAGCGCGCCGCGAGGGAATCCGTCTGTCGGCGCCGTTCAACGCGGCCCCCACAGCTTGGAGACGCTCGGACCTGCATCTCGCGCTCGCGTCCATCCGCTGCGGAGCGTGCTCGGTGCAGCGCGCTGCCTCGCAGTACGGGATACCCACTGGGACGCTGTACGGCCGGTGCAAGCGCGAAGGGATCGAGTTGTCGAGAGCCAACCCCACGCCCTGGTCTGAAAACGCCATGGTTGAAGCGCTGGAGGCTGTCAGAGTCGGGCAGATGTCAATAAACCAAGCCGCAATACACTTTAACCTGCCGTACTCTTCGCTCTATGGAAGATTCAAAAGATGCAAGTTTCAAAATCAGGTAATGCAAACAAATGAACAACAAGATACACCGATATCTCAAGAAATGAAGCAACACATCGCAGAAGTACCTTACAACCAACACGTACAAACTCACATGCATAGTACACAAAGTCTCATACACGCCTCTTCATACACGCAACAGTATGCAGAAGACGTGTCGAGCATGCAGGATTATGGACAGACAATGTTTTATAGTCAAAACTTTAACAGTATCCTGACGAGTTGA
- Protein Sequence
- MTDHELTLVKCEPPSENDDSNSAYTHDCFSQQDSGTLEELPPLAPAGPAATPVCVKQEPADSLPAFTLETLEPAPHNNAGSALLSRHMTLQSQEGANVPDFISLMSVKDEPLSEGEQQHCSGDDTSDSTGTQPEVSTRSSPKSWSQQDMNNALDALRQHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLKGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRSDLHLALASIRCGACSVQRAASQYGIPTGTLYGRCKREGIELSRANPTPWSENAMVEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKFQNQVMQTNEQQDTPISQEMKQHIAEVPYNQHVQTHMHSTQSLIHASSYTQQYAEDVSSMQDYGQTMFYSQNFNSILTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -