Aio015628.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- retn
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000016.1:5277658-5288486[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-18 2.3e-15 57.4 0.0 19 89 30 98 22 98 0.93 2 2 2.1 4.8e+03 -1.3 0.2 15 15 216 216 190 261 0.58
Sequence Information
- Coding Sequence
- ATGAGCTATACTGGTACAAATGAATGTTTTACTAAACGGGACCGACCCGTGACTCCAATACGGGCACAAGCGGTGACAGCTTGTGCGCCCATAAACCGGTTACCGATTATGGCCAAGTCGGTGCTGGATTTATATGAATTGTATAACCTGGTGATAGCAAGGGGCGGCCTAGTTGAAGTTATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGTCTCCGCCTACCGTCCTCCATCACGTCCGCCGCCTTTACATTACGCACACAatACATGAAGTATTTGTATGATTACGAGTGTGATAAACTTAACTTGTCTACTCGCGTCGAACTGGAAGCTGCTATCGAAGGCAACAGACGGGAGGGAAGGCGCGCCTCAGGACAATATGACGCACAGTCATCACTTGTTATGCCGCCTCTGAACCGCAACGTGCAAGCAACTCTGTCACCGCTGGGGCAGCAGCAGTTGGCGCTGTCTATAACTACCGCCATGAACTCGTTTCCTCGTATGCAGCATTTGCCAATAATATCACCGCACGTGCAACAATTTATCCCGCCAGATTTAGAAATACGCATGAGAGAAGTATACGCGAAGATGATGCAGCAGCAGGAGCAACAGCAGCGGCAGCAACAGCAGCAGCAGCACGTGAGAAATGGATCGCAATCTCCGCCAGCTCTGAACGGACAGCCAGCGGTGAACCAGCGCGAGGCGCCCGCATTTAACCCCATCGACATGTCCCGTTTCAACTTATGGTCTCTGTGCCACGCTAACGGCAATAATCAACTCATAGACCTCGAGCCGCAACGCGAAGCTTTAAATTTGAGCGATAGTCCAGTCCCTGGGCCATCTGGCGTCAAGCGTCATTCGTCAGAATCCTCAACCTCGCCTCCCGAAGCCAAGCGTACCGCTCCCAACCGGACACCATCACACCCGCCATCCCCGCAAGCGCTATCCCCGCAAGCGCTATCCCCGCAAGCGCTGTCCCCGCAAGCGCAAGCCCCTCAGGGATTGGTTCCCGAAGCATCACCGCAGCCACATTCATCTAACGCAAATGATGCTCCCAATGGCGGGAATGGAACAACATTTAAAATCGTTACTAGAGttaatGAAGAGACAGGAGAACACCAGCTGCTGGTTACCATAGAATTCAACGGAATCATATACGAAGGAGTGCTCTCCGCATCACAAAATAACAGCGGAAACAATGGCCGCAGACATATTTTTCCgtcctaa
- Protein Sequence
- MSYTGTNECFTKRDRPVTPIRAQAVTACAPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKLNLSTRVELEAAIEGNRREGRRASGQYDAQSSLVMPPLNRNVQATLSPLGQQQLALSITTAMNSFPRMQHLPIISPHVQQFIPPDLEIRMREVYAKMMQQQEQQQRQQQQQQHVRNGSQSPPALNGQPAVNQREAPAFNPIDMSRFNLWSLCHANGNNQLIDLEPQREALNLSDSPVPGPSGVKRHSSESSTSPPEAKRTAPNRTPSHPPSPQALSPQALSPQALSPQAQAPQGLVPEASPQPHSSNANDAPNGGNGTTFKIVTRVNEETGEHQLLVTIEFNGIIYEGVLSASQNNSGNNGRRHIFPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -