Apul000089.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Autographa pulchrina
Gene Symbol
nfxl1
Assembly
GCA_905475315.1
Location
FR997785.1:1143297-1145768[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.014 2.2e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 17 3.1e-07 0.0049 17.6 15.5 3 19 186 202 185 202 0.95
4 17 1.6 2.4e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 17 4.4e-08 0.00068 20.4 12.7 3 19 239 255 237 255 0.92
6 17 2 3.1e+04 -4.2 1.7 6 10 280 284 279 284 0.85
7 17 4.6e-08 0.00071 20.3 10.4 1 19 290 308 290 308 0.99
8 17 6.1e-06 0.095 13.5 18.6 3 19 345 361 337 361 0.86
9 17 0.00012 1.9 9.4 20.2 1 18 395 412 395 413 0.97
10 17 3.2e-10 5e-06 27.2 13.9 1 19 422 440 422 440 0.99
11 17 0.0002 3.2 8.6 6.4 9 19 488 498 486 498 0.89
12 17 0.0043 67 4.4 6.9 1 12 508 518 508 518 0.90
13 17 0.35 5.4e+03 -1.7 3.6 14 18 547 551 547 552 0.87
14 17 3.1e-05 0.48 11.3 5.1 1 11 588 598 588 599 0.97
15 17 4e-05 0.63 10.9 13.9 4 18 630 645 628 646 0.87
16 17 1.4e-05 0.21 12.4 11.1 1 18 687 705 687 706 0.86
17 17 2 3.1e+04 -4.1 1.3 6 10 736 740 735 740 0.85

Sequence Information

Coding Sequence
ATGGCACGTAGATATAGAGACGCCGCTGCGAAACTGCAGCAAAATGTTCAAAAACATTTACAAGGGATGAAGGAGCTATCATCGTCTGAAGATGAAGAACCATGCGAGTCCAGCGTCCTGGAGGGAGTCTTCCAGAGCTACTGGCGCGGCGGTGGAGACACTCACATGCTGAACAGGACTAAAAACCTACTAGAGGAAGCAATAAGCGGCCGCAGCGTAACTTGTCTCATATGCATAGGATCAATCAAAAGAACGAACGCTATATGGACTTGTGACCATTGTTTCTCCTATTTTCATCTGTCCTGTATTCAAAAATGGTCAAATGACAGCATAAGCTTACGTAGTGAAGAAAGCCAGGGACCAATAACTGTTTATAAACAACAGAAAATTGAATGGTGCTGCCCTAAATGCCGGCAATCGTATTCTAAAGAAGAAATACCGCGGAAATATCGATGTTTTTGTGGAAAAACTGATGATCCACAATACCACCCATGGTTAATTCCACATACTTGTGGTGAAGTTTGTGAAAAAAGACTGTCAACTAGTGAGAACTGTAAACATAGATGTTTGCTCTTATGCCATCCCGGTCCCTGCCCACCTTGCCCTCAGACTGTTAATGGAATATGTTTTTGTGAAAAGGAACGCAAGAGAGTAAGATGCAGTGCTGCTAAATGGTCTTGTGGGCAAGTTTGTAAGAAAACACTCTTGTGTAAGACCCACAAATGTGAAAATGTGTGTCATGAAGGTGATTGCCCAGAATGCAGCTACACCAGCATCCAGCCATGTCAGTGTGGCGCTGAGAAAGCTAAAAGACCCTGCAGTGATCTGTTTTGGCAGTGCCAGAAAGCATGTGGTAAACAATTTGCATGTGGTTACCATAAATGTGAGAGAATATGTCATTCTAGTGATTGTGGAGCCTGTCCTAACTCTGGCATGACATCATGTCCTTGTGGGGCTAACCAACGCTATGTCCAATGCCCAGATGTGATGGAAACCTGCTTAGGTACATGTGGTAAACTGCATGAAGATTGTGAGCATAACTGTCCAGAAAAATGCCATAAAGGAAAATGTCCTCCATGCCAAGTCTTGATACAGAAACAATGCCAATGCTCAACACATACAAGATCTCTACCATGTAGTAAAGAGTATAAATGTGATACAAAATGTAGAGGTATAAGACTGTGTGGTAAGCATGGATGCGGTAGAAAATGTTGCAATGGAAGCTGTCCTCCATGTGAGAAAATATGTGATAAAGGCCTCCAATGTGGTAGACATAAATGCACCAGTATTTGCCACCGCGGGCCCTGCTATCCCTGTCCTAGAGAATCAAAGGTGACCTGCAGATGCAAAGAAACATACGTAACAGTTCCTTGTGGCAGGGAGAGACAGACTAAGCCTCCAAAATGTAACTTACCTTGCAAAATTAAATACAAATGTGGGCACATTGAAGAAAATAAGCATTCCTGCCATTTTGGTGACTGTCCACCATGCAAAGCCATATGTTACAAGTCATATCCTAAGTGTAGTCACCAATGTAAAGCAGTGTGTCATGAATATGTAGCAGTACTCTTCAAACAGGTAGAAAAGCCGGCTACTCCTTGGGAAGTGCAACCACCGAAGACTAAAATCATGACCTTAGATTGTCCACCTTGTGACACACCCATACCGATTGTCTGCTTTGGTGAACATGAGACTGACAACCAGCCTTGCAGCTCGGCGGCGCGCAGGCCTTGTGGCAGAGAATGTGGACAACCATTGTCCTGCGGGAATCACAAGTGCACTTTAATGTGCCACCTCTACAGTCCTCACCCTGAGTATCAGAATGTGCCTTCTCGTTGCAGGCAGTGCGACAGAGAATGTTTAGTACCTCGTCCTGAAAAATGTGTGCATAAATGTTCTATCAGAGCCTGTCATCCTGGTCCCTGCCCACCGTGTGAGATACTCGAAAGATTAGCCTGTCACTGTGGCATTACTGAGATTTACTTGCGGTGCCGGGAAATATCTGGCGCTACTACAGAGGTGCTGTCATGTAAGCAACAATGCCCTAAGAACCTGGAATGTGGTCACCGTTGCCGCAACACATGCCACCAGGGAGCCTGCAACAACCAAGTGTGCACTAAGAAGACTAAAGTACACTGTCCTTGCGGTAACTTAAAGAAGGAAGCTCCTTGCAATGCTGTGCGTCAGGGGGATGCTAAAATACAGTGTGACGAAACCTGTGAAGCTAAAAAGATTTCTATGAAGATACAAAGTGAGAAAGAGAAGCAGAGATTGAAGGAGTTGGAGGAAGAGAAGAATCGCAAAGAGCTGGCTGAGTATGAGTGGAAACTGAGCGGGAAGAAGAAGAAATACAAGGAGAAAAAATCGGTTGTCAATAAAGATGACAGAGGGTTCTTGAGAAAATATTGGGTACCAATTATGTCATTCCTAGTAATGTTGCTAGCAGCTTTTTATTATATTATTTATGTGTGA
Protein Sequence
MARRYRDAAAKLQQNVQKHLQGMKELSSSEDEEPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEAISGRSVTCLICIGSIKRTNAIWTCDHCFSYFHLSCIQKWSNDSISLRSEESQGPITVYKQQKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPQYHPWLIPHTCGEVCEKRLSTSENCKHRCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQVCKKTLLCKTHKCENVCHEGDCPECSYTSIQPCQCGAEKAKRPCSDLFWQCQKACGKQFACGYHKCERICHSSDCGACPNSGMTSCPCGANQRYVQCPDVMETCLGTCGKLHEDCEHNCPEKCHKGKCPPCQVLIQKQCQCSTHTRSLPCSKEYKCDTKCRGIRLCGKHGCGRKCCNGSCPPCEKICDKGLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETYVTVPCGRERQTKPPKCNLPCKIKYKCGHIEENKHSCHFGDCPPCKAICYKSYPKCSHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPIPIVCFGEHETDNQPCSSAARRPCGRECGQPLSCGNHKCTLMCHLYSPHPEYQNVPSRCRQCDRECLVPRPEKCVHKCSIRACHPGPCPPCEILERLACHCGITEIYLRCREISGATTEVLSCKQQCPKNLECGHRCRNTCHQGACNNQVCTKKTKVHCPCGNLKKEAPCNAVRQGDAKIQCDETCEAKKISMKIQSEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKSVVNKDDRGFLRKYWVPIMSFLVMLLAAFYYIIYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00185823;
80% Identity
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