Basic Information

Insect: Autographa pulchrina
Gene Symbol: -
Assembly: GCA_905475315.1
Location: FR997777.1:8511289-8516857[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.012 1.3 10.4 1.4 2 23 495 517 494 517 0.93

2 7 8.8e-05 0.0091 17.2 0.3 3 21 534 552 533 553 0.95

3 7 0.0021 0.22 12.8 0.1 2 23 562 583 561 583 0.97

4 7 0.00049 0.051 14.8 0.1 1 23 596 618 596 618 0.98

5 7 1.9e-07 2e-05 25.5 0.5 2 23 625 646 624 646 0.98

6 7 0.0001 0.011 16.9 0.1 3 23 654 674 652 674 0.92

7 7 0.00013 0.013 16.6 1.6 1 21 680 700 680 701 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.012	1.3	10.4	1.4	2	23	495	517	494	517	0.93
2	7	8.8e-05	0.0091	17.2	0.3	3	21	534	552	533	553	0.95
3	7	0.0021	0.22	12.8	0.1	2	23	562	583	561	583	0.97
4	7	0.00049	0.051	14.8	0.1	1	23	596	618	596	618	0.98
5	7	1.9e-07	2e-05	25.5	0.5	2	23	625	646	624	646	0.98
6	7	0.0001	0.011	16.9	0.1	3	23	654	674	652	674	0.92
7	7	0.00013	0.013	16.6	1.6	1	21	680	700	680	701	0.95

Sequence Information

Coding Sequence: ATGGAGGGATTTTGCAGAGGTTGTCTGATAAAATACAACGAACCGATGGAACTGCTACAATACACCGAAAAGAATAGAAGACTGTTTGTTTACTGCACTGGTTTACAAGTAAAAAGAAATGATACTTTCACATTCCAATTATGTAAAGACTGTTTCCTCAATATGAAGCTGGCATGCAAGTTCAAAAAGCTTTGTCGGACATCAGATAAAAGATTCAAAAACTATATGGCTTTAAAAGATACAAGTGATATGGTTGACTTCTGTACATTCCTCAAAAATACTGAAGATGCATTGACTTTACGTCTGCCCATGAGTGGAAACAGTACACCGGCTAACCAAAAATGTAGAGATGATGACAATGACTCAACATGCACAAGTATCCGTAACTTCATGACTGACATCCTGCAAGGTGAAGAGGTGCCGGACACAGAGGCTCGTATCATCAGGGAAGTTATACAAGAGGAGGCGGATGTGTTGGATGAGTCTCTGGACTCCCATTGGCTGCAAGATGACGCTTCTATTGATGCTGACTTTAGATTGGATTTTAGTTTCAGCCCCTTCTCAACTCCACGCGCGGTTACTAACGATCGCTGTTACACACCCAAGAAACAGACAAACCAAAAAGAGAGCCAAATCAATATAGACATAATAAACAGCAAGAAAGTAAACACTATAGAAAATACCTTTATACACGCATTTAAAAACGAAAAATCCAAAGACTTATGTGCTTTAGATGTAGATGAAATTGACGGTATTATGAAAACAGATAGTAATTTCAGTCTATCAGTGTTAGATGATTTAGATAAAAGTCAATTAAATATGCAGAATTATTATGTGCCGGAGCTCCAAGTTAATTCTTTGCAGTCTGGTAAAGTAACTGCTGTAATAAATGCTGATAGTGTAGAAATAGAAGTTTTTAAAGATACTAAAGATACTATTGATAAGAATTTAGAAAGGGCTCTGAAGAATGCTGATAATAAAGAGTTCTCTTTGGATGATATACTTGTGTCACCTCCAGGCTTCCAAATGTCATCAGCAGCATTAACACCCACAATATCAAACATACTATTTGGTGAAAAACTAGAAATACCAAACAAACCAGTAAATATAGGACAACAAATAGAACCATTCACAGAAATAGGAAACGGTGAAAATGATAACGAAATATTTGAGGATTTTTTTAATCCAAAAGACTATGATATAGCAAGTGCTAAAACTAGTATTAAAGAAAATATAGACATCAATATTGGAGATATCAAAGAACCTATGAGCCTTGATAATATTGAAATTGATGATATTAATAAAACCATTGATAAAAAGGATATGGAAAACATTTTAAAAGAGGATAGTGATAAAAAAGTTCCAACTACTGAAAAAGATAGCAATGTTAATAATATGGATGTGTCTACAGAAAAAGATGAACAGAAAGAGATAAAAATAACAACAGCTACTAGTAATGATCAATTTGATTTAGAGAAATCCTATTGCTATTTGTGTAGCAAACAGTTTACAAATTCTAGAGCCCTTAGTATACATTTTTCGAAAATGCATCAAATTAAAATTATTAGACCTAGGTCGTATGCACATAAAAAGAAATTATGCCAAGAATGTGGAAAAGAATTTTCTCAGAATGCCAACTTTTATAGACATGTGAAAAATTGTTCGAAACCTGCCATAACCATTAAATGTAAGATTTGTGCGCTAGAAGTTACTTCAGAAGCAAAGCTAGAAAGGCATATGAGCACACACACCGGGAAATACTTAAAAAAAGAAACTGGAAAGGAATTCGTTTGTAGTGTTTGCGGCGCCATTTTTAATAAGGTAGGCAACTACGCCCTACATCTGAGAAGACATTCGAAGAAGTACACACAGACTTGCACTGAATGTGGAAAGGGATTCTACAGAGTATCAGACTTGACGGTTCATATGAGGACGCATACGGGTGAACGACCGCTATCATGCATATATTGCCCAAAAACGTATGCCCGACAAGATGCTCTTGCCAAACATATGAAAGGACATAGAGATGAGAGACTATTCCAGTGCGACTATTGTGACTCCAAGTTTAAGGTAAAGTTCGAACTAAAAAGACATATACAAAAATCGCAATTATGCTTAAGAATGCGTGGTTTATTACCGGATGTAGAAATTGTGAAAAAGAAAGACAAAAAGAAAAGTAATAAAAATATTCAAGTAGCAGTTACATATACACAATGTGATAATAATACTATAAAAGAACTCCTAGAGTTGCCAAAAGATGACAACAAAACATATGAATTGCCTTTTATAGAAACTGAAATGAGCAATTAA
Protein Sequence: MEGFCRGCLIKYNEPMELLQYTEKNRRLFVYCTGLQVKRNDTFTFQLCKDCFLNMKLACKFKKLCRTSDKRFKNYMALKDTSDMVDFCTFLKNTEDALTLRLPMSGNSTPANQKCRDDDNDSTCTSIRNFMTDILQGEEVPDTEARIIREVIQEEADVLDESLDSHWLQDDASIDADFRLDFSFSPFSTPRAVTNDRCYTPKKQTNQKESQINIDIINSKKVNTIENTFIHAFKNEKSKDLCALDVDEIDGIMKTDSNFSLSVLDDLDKSQLNMQNYYVPELQVNSLQSGKVTAVINADSVEIEVFKDTKDTIDKNLERALKNADNKEFSLDDILVSPPGFQMSSAALTPTISNILFGEKLEIPNKPVNIGQQIEPFTEIGNGENDNEIFEDFFNPKDYDIASAKTSIKENIDINIGDIKEPMSLDNIEIDDINKTIDKKDMENILKEDSDKKVPTTEKDSNVNNMDVSTEKDEQKEIKITTATSNDQFDLEKSYCYLCSKQFTNSRALSIHFSKMHQIKIIRPRSYAHKKKLCQECGKEFSQNANFYRHVKNCSKPAITIKCKICALEVTSEAKLERHMSTHTGKYLKKETGKEFVCSVCGAIFNKVGNYALHLRRHSKKYTQTCTECGKGFYRVSDLTVHMRTHTGERPLSCIYCPKTYARQDALAKHMKGHRDERLFQCDYCDSKFKVKFELKRHIQKSQLCLRMRGLLPDVEIVKKKDKKKSNKNIQVAVTYTQCDNNTIKELLELPKDDNKTYELPFIETEMSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01221879;
90% Identity: iTF_00185605;
80% Identity: -