Apul004306.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Autographa pulchrina
Gene Symbol
Jarid2
Assembly
GCA_905475315.1
Location
FR997762.1:4085218-4098091[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1 8.3e+03 -2.0 0.1 6 38 216 247 212 255 0.78
2 2 1.7e-20 6.4e-17 62.5 0.0 6 88 1735 1814 1731 1815 0.93

Sequence Information

Coding Sequence
ATGTCTAGACCAAAATGGCTGCCGAGGGCTTTAAAATCAATAACTCATAGCGTCCTGTCTGACCACCCCCCTCCCATCCTCCCCTCCCCTGCACCATGGCTACCTTTGATTGGCTTATGTACAACGCTGAATCACCCCTTTGTCTGTGCACGGTCTCGTCGCGTTCTCGCCCAGCGCAAGTTCGCGCAGGGCGCCTACGTGCCTCCGAGCGCTGCGCCCGCGCCGCCTACCAACGGCGACCGCCGAGATAACAACCCCTCGGCTAGAAACTTTATTATTCAACACCAAGTCGGCCCATCCGTCTTCGTTGACTACATATCTTACCAAGCATTGGAATTACATCACAAAGGCCTACAACCATTCGTAATGGTTAAAAGGCTTGAAGTGCCGCCTAGTCAGAGAACCAGGGCTAGGAGAACTGAGCTTATGAGGAACCGAGAGCTTATTAGAAACAGGGAACTAGATAAAAATAGAGATATACATGATAAGAAAACCAGAGAAAACCTACGGACTACCACAACTAGAGAGAGTACTAGAAACAAAGAGACTAATAAAAGCAAAAATATTGCAACTAACAAAGACAAAAATAATGACAATACTACAGTAAAAGATAGTTCTAAGAAAAATAATCTTCGACAGACATCTGTAAAATCGTTAAAAGAGATGGTTAAATCCAAAGAAACTCCGACTGAAAAAGATGTGATTAAGAAGAAAGATGTAACTAAAAACAAGTTAAATAAAACTAAAGAGAAGCGTAATTTATCGACGAATAAATCAAATCGTGAGAGGCCTCCGCCTATTAAAAAGCCAAAGTCGACCAAGCCCCCCGTGCATGTGATGTCACTGCGTTCAAGGCGACAGAGCGAGCCGGAATCGAATCAAAAGGCAGTGGCGACCCGTGCCACAAAACGACTGGCAGTAGCTAGGCGTAAAGTCGCTAACGCCTTAAAGGATACAACTCCACAAGAAAAGCCAAAGCAAAAGAACAATAACGCTCTTAAAACACCAAAAGGCGGTACCCCGGCCCCCTCAGAGTTCTCAGTGGACGATAACAGACCGTTGACGTACTTCGCCAAGGGCAGCACTCCGAAGCGTGCGCCGGCAGCGCCCGTGCCGCGCGTCGCGTTAGTACCGCTCACTTCTGCTACTCCTACTACTGCTCCTACAACTTCTACAACTTCTACAACTGCCACAACTGCCCCTGAGCCAGTAGCCGGGCCGAGTGGATCTAATAAAAAGAAAGTTACGACACGTTCTCCGAAAACGAATACTAACCCTTATGTCTTGTTACCCAACATTGCCCCAACGGCACCTGCGCCCGCACAAACTTCAAACGAAACACAAACAAATACACCTGAACCGCCTTTCTATAGCACGTCGCCACATATATATGATTGGCTGCATACATCCTTTGATGATGAGCTAGGTCTTCTCAAAGTGGTAAAGAGCACGCCTGCTCCTTGGGCCACAGTTCAACCAAGTTGCCCTGCTCAACGATGGCACACCGTCAAGGAACTAAATAATGCCGACAAAGCTCAGCTGGAAGCCCGCTGCTTAAGGTGCGGCGCCTGTATGAGAATAGATAAATTAATGAAGATCTCAGAGACCCTCAAATCGCTGGTTAAGTTTGACGTATCAGGAGACGATGATGCTAGCACCGCTGAGCCCAATAAACAGGAAGATAAGGTCTCGTCAGACGGAACTATTTACATGGAGCTGTTACCAAAAATGGCTAACAAATTGATGAAAATCCGCACTCATAACGTTCATGGTAAAAAAATTTTATCTGCTTGTCTGATACCAAGAGCTCATGCGCAACAGACCAAAGATCTTTCGTTAGCAGAGCAAGAGGGTCTACTTGAACAAATAAACGCGACCGTAACAGCCAGTACGCAGGCTACTGAACGCTCAGGAAGGCCGGTTATAGAATCCAGGTCTGACACAGATAGCTCAACTGGTGAGCCTGATCCGAAAGTCCGACCCACTTTTAAAATGAAAAGACAACGGCGCCAGTCCGTGTGCGCGGACTTGGCAATGCAGCCTCAACCACAACGCAAAAGACGACAATCCGTTTCGGCTGAATTGGCATCGCAGCCGCAGGAACAACAACAAAAGAGTGATGTGGCAATGCAGCCGCGACCACAAAGACAGCGGCGAAAATCAATGTGTGCCGAATTGGCGATGAAAGAACAACAACAGCTTGAGCTAGCTATTAAAGAACAGGAAAAACAAAAGCGCGCATTAATGATAAAAGAAGAAGAACATAGGAAATATATGACTAAGCGACTACAGGAACAACGGCAACGCGAATTAGCGTTAAAAGAGTGCCAAGAACAACAAAGGCGGGAGTACGCGCAGCGGCAGCAACAAGAACATCAAAGACGAGAAAGCGAAAAGCAACAGGAACAACAGCGGCATGAGTCCGAAATGCTGCGCCAACAGGAACAACAACGGTATATGTTCCAGAAGGCGGCAGCGCAACGACCACTACAAAACCGTGACGTAGCGTACTTGACTATGGCTTTACAGGCGGGACCACATCAAGGAGTGCGTGAAACAAAGTCTGGTCAAAAACCAGAGGAAAATGTGCCGCCACAACCACAACAACAAAATGTTCCGCAGCAGCAAGAACAGCGACAACCTAAATCAGTTCCCGAGGTAAAAGTACAGCCGAAATCACAACGTCAACGACGCCAATCAGTTTCGGCAGAACTGGCGGCCAAGCAGCAGCAGCAAGAACAACGACAACCTAAATCAATTTCTGAGGTAAAAGTACATCCGCAAGCACAACGTCAACGACGTCAATCAGTTTCGGCAGAACTGGCGGCCAAGCAGCAGCAGCAAGAACAACGACAACCTAAATCAATTTCTGAGGTAAAAGTACAGCCGCAATCACAACGTCAACGACGTCAATCAGTTTCGGCAGAACTGGCGGCCAAGGAGGTGCAAGAGCAACGACAACGCGAATTAGCTTCCTCCACAACGGCTACACGGTCGCCACGACAACAACAGGGGCGTCAAACAGTATCTGCGGAATCGGTGGGCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGTCCAGAATTATCGATGCCGCAACGACGACAAAGGCGCCAATCCGTTTCGGTGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGCCCAGAATTATCGATGCCACAGCGACGTCAACGACGTCAATCAGTTTCGGCAGAACTGGCGGCCAAGGAGGTGCAAGAGCAACGACAACGCGAATTAGCTTCCTCCACAACGGCTACACGGTCGCCACGACAACAACAGGGGCGTCAAACAGTATCTGCGGAATCGGCGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGTCCAGAATTATCGATGCCGCAACGACGACAAAGGCGCCAATCCGTTTCGGTGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGCCCAGAATTATCGATGCCGCAGCGACGACAAAGGCGCCAATCCGTTTCGGTGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAACAAGTGCAGGCGCAACCACAACAGCGACAATCCGATAGTCCAGAATTATCGATGCCGCAGCGACGACAAAGGCGCCAATCCGTTTCGGTGGGCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGTCCAGAATTATCGATGCCGCAACGACGACAAAGGCGCCAATCCGTTTCGGTGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAACAAGTGCAGGCGCAACCACAACAGCGACAATCCGATAGTCCAGAATTATCGATGCCGCAGCGACGACAAAGGCGCCAATCCGTTTCGGTGGGCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGTGCAGGCGCAACCACAACAGCGACAATATAGTCCAGAATTATCGATGCCGCAACGACGACAAAGGCGCCAATCCGTTTCGGTGGCCCTGGAGCAATTACAACAACAGACTCATGAATCAGTTAGCGAAGAAAAAGTGGAGGCGCAACCACAACAGCGACAATCCGATAGTCCAGAATTATCGATGCCGCAGCGACGACAAAGGCGCCAATCCGATTTCGAATCGATTTGCGAAAAATCATCGGCGGAGGACTTGGTTGCTGAACATTCATATGCCCGACCTTCAATTGCAGAGGACATCGCATCACTCGATAGTGATAAGTTATGCGAAATGATTGACGAAGCGACGATAGGTTGGGACCCGCGTCAAATTGAACTAAGCACGCCGTATTCTATCTTAGAACACGATAGGCCAAGTGACTCAGAGAATAACGAGGAACCAATTTACAACCAGACAGGAGAACCAATGGCTGAAACCTATGAATTTCCATTGGTCAATGAAGAAACGCTTCAAGACATTAAACCTATCTTCCAGTTGGTAGGAAATTCTTCGCAACAGGAACAAGTTGCAGGAACGTCGGGTAGATATTCGCCGGGGCTGATAGGATCGGAGTCCTCCAGCTTCCATCTGAATTATGAGGATTCGGTTAATGGAGACGCGGCTTTAGAAGCCCGCATGATGGCGGAAGTCGACGAACAGGCTAGAGCCTTAGAGAAAGAAAAGGACGCGAAAGGAGATAATTGCACTGATAAAGGCCACTCCTCAGGAACAGATCCTGGTGCCAGCAGTGGGTTTCCGAACAGCGCGGACACAGCTCAAATCATTGATGCTCCCGTGTTTCATCCTACGATGGAAGAATTTGAAGATCCCATAGCCTACTTCGAAAAGATCCTGCCGATTGCTGCGAAATATGGCATTTGTAAAGTTGTGCCCCCTGACGGTTGGGAGCCTGAATGTAAGATAAATGAAGACATTCGCTTTGACGTCTCTAACCAGTACATCTCTCGTCTGTACTGTCGCTGGGGACCGGCTTCGCGCGAGCTGAGTGCTCTCAAACTTTGCCTGCAACAACAGAACGTCAATGTAACCCGCCCGCCGTTGGTTGACGGGGTGGAAGTGAACCTTCCTAAGTTGTACCACCTGGTGCAACGCCACGGTGGTCTAGAAAATGTGATCAACAAGAAGCGCTGGGGCAAGGTCGCAGATGAAATGAGGTTAAACAAGGCTCCGGTCATCGATAGAAAATTGGACCAGCTATACGTGAAGTACCTGCTTCCGTATGCCACGCTCGACCATCAGGAGCGCCAAGAAATTATGAAGAAGGTGGAAATGGCCTGGCACCACAAAAATCAGAAGCTACTTGACCGGGCCACGAACCCTTTGCACCGTCAGAAGCGCATGCTAGGAGAGTCCGAGTCTTCTGACGGCGAGACGGAAGACGAGGGCACGGCTAACGCCCTCGCCGACGCCGAGGACTGCGTCGTGCCCGGGCTGTGCATGAACTTTGCAAAGTTTAAAAAGGTCGCAACTAACGCCTACGAAAACCACATCGGCATCGAACGTCCGGACGCTGACATGCCGTCCATCGAGGTCATTGAGGACCGCTACTGGCGGCTCGTCATCGCGGGTACCGAGCACCTGTGCGTCAACACCGCGGCCATCGACACCGGCGAGGAGGGACACGGCTTCACCATAGACAAAAACGATTGCTATGGCCGGCATCCATGGAATTTGAAGATGTTTAGTAAAAATCGCGGCAATGTTCTGCGCTACTTGGGCCCAGTGCTGGGCATGACTGTGCCCACTCTACACTTGGCCATGATATTTTCAACGAGCTGCTGGCATAAGGATCCACACGCTCTGCCGTGGACCGAGTATATGCACAATGGACAGGGAAGGATCTGGTACGGAATACCAGACGACCAGTCTGATAACTTCCGGAAGGCCGTCGAGACTCTTGCTCCGACTTCATGCCAGAACAAATGCCTCTGGCTACCTTCAGACATAGCTATGATACCGCCGTCTATACTGCGCGAGCACAACGTGTCTCTCTCGCGCACGGTGCAGAACTCCAACGAGTTCGTGCTGGTCTTCCCGAAGGCGTACTCGTGCTCAATAAGCACTGGTTACACAGAGTCTGAGAGCGTGTACTTCGCTCCTCGCTCCTGGTTGGAGAACCTCGAGCAAGTCATCAAGGAAACCCGTGAGAGCTGCGAGCCCACAATGTTCTCTTTGGAAGAACTAATCATCCTGATGTGCAAAGACCCGGACGCGGATGTCGATCTACTCAAACAAGTGAAACCTGTATTGGACAAGATCGTCAGCGAAGAGATCTCCTACCGCCAGCAGTTAGAAGAGAAAGGCCTCAAATTCGTAACTGAGACTGAGACTGCTTCGAAGTCAAGTCGCAAACGCAATGCGAGCGCTTACAATGTGCGCGATCAAGATGAGTGCGAATACTGCAGGGCTACTCTGTACCTCTCAAAGGTACGCGGCATGACCGGCAAGAAGTCTTCTCTATGCCTTGAGCACGCCCTGTTGCTGCTCAACAATCCCAAATACAAGGAGGTGAACGTAGGCCAGCTTGAGGTGTTCGTGTACATGACCGTGGAGGAGCTGAACGACGTAACGGCCAGCGTCGAGGCCCGCGTCGGCCCGTCGTCTTAG
Protein Sequence
MSRPKWLPRALKSITHSVLSDHPPPILPSPAPWLPLIGLCTTLNHPFVCARSRRVLAQRKFAQGAYVPPSAAPAPPTNGDRRDNNPSARNFIIQHQVGPSVFVDYISYQALELHHKGLQPFVMVKRLEVPPSQRTRARRTELMRNRELIRNRELDKNRDIHDKKTRENLRTTTTRESTRNKETNKSKNIATNKDKNNDNTTVKDSSKKNNLRQTSVKSLKEMVKSKETPTEKDVIKKKDVTKNKLNKTKEKRNLSTNKSNRERPPPIKKPKSTKPPVHVMSLRSRRQSEPESNQKAVATRATKRLAVARRKVANALKDTTPQEKPKQKNNNALKTPKGGTPAPSEFSVDDNRPLTYFAKGSTPKRAPAAPVPRVALVPLTSATPTTAPTTSTTSTTATTAPEPVAGPSGSNKKKVTTRSPKTNTNPYVLLPNIAPTAPAPAQTSNETQTNTPEPPFYSTSPHIYDWLHTSFDDELGLLKVVKSTPAPWATVQPSCPAQRWHTVKELNNADKAQLEARCLRCGACMRIDKLMKISETLKSLVKFDVSGDDDASTAEPNKQEDKVSSDGTIYMELLPKMANKLMKIRTHNVHGKKILSACLIPRAHAQQTKDLSLAEQEGLLEQINATVTASTQATERSGRPVIESRSDTDSSTGEPDPKVRPTFKMKRQRRQSVCADLAMQPQPQRKRRQSVSAELASQPQEQQQKSDVAMQPRPQRQRRKSMCAELAMKEQQQLELAIKEQEKQKRALMIKEEEHRKYMTKRLQEQRQRELALKECQEQQRREYAQRQQQEHQRRESEKQQEQQRHESEMLRQQEQQRYMFQKAAAQRPLQNRDVAYLTMALQAGPHQGVRETKSGQKPEENVPPQPQQQNVPQQQEQRQPKSVPEVKVQPKSQRQRRQSVSAELAAKQQQQEQRQPKSISEVKVHPQAQRQRRQSVSAELAAKQQQQEQRQPKSISEVKVQPQSQRQRRQSVSAELAAKEVQEQRQRELASSTTATRSPRQQQGRQTVSAESVGLEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSVALEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSAELAAKEVQEQRQRELASSTTATRSPRQQQGRQTVSAESAALEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSVALEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSVALEQLQQQTHESVSKEQVQAQPQQRQSDSPELSMPQRRQRRQSVSVGLEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSVALEQLQQQTHESVSKEQVQAQPQQRQSDSPELSMPQRRQRRQSVSVGLEQLQQQTHESVSKEKVQAQPQQRQYSPELSMPQRRQRRQSVSVALEQLQQQTHESVSEEKVEAQPQQRQSDSPELSMPQRRQRRQSDFESICEKSSAEDLVAEHSYARPSIAEDIASLDSDKLCEMIDEATIGWDPRQIELSTPYSILEHDRPSDSENNEEPIYNQTGEPMAETYEFPLVNEETLQDIKPIFQLVGNSSQQEQVAGTSGRYSPGLIGSESSSFHLNYEDSVNGDAALEARMMAEVDEQARALEKEKDAKGDNCTDKGHSSGTDPGASSGFPNSADTAQIIDAPVFHPTMEEFEDPIAYFEKILPIAAKYGICKVVPPDGWEPECKINEDIRFDVSNQYISRLYCRWGPASRELSALKLCLQQQNVNVTRPPLVDGVEVNLPKLYHLVQRHGGLENVINKKRWGKVADEMRLNKAPVIDRKLDQLYVKYLLPYATLDHQERQEIMKKVEMAWHHKNQKLLDRATNPLHRQKRMLGESESSDGETEDEGTANALADAEDCVVPGLCMNFAKFKKVATNAYENHIGIERPDADMPSIEVIEDRYWRLVIAGTEHLCVNTAAIDTGEEGHGFTIDKNDCYGRHPWNLKMFSKNRGNVLRYLGPVLGMTVPTLHLAMIFSTSCWHKDPHALPWTEYMHNGQGRIWYGIPDDQSDNFRKAVETLAPTSCQNKCLWLPSDIAMIPPSILREHNVSLSRTVQNSNEFVLVFPKAYSCSISTGYTESESVYFAPRSWLENLEQVIKETRESCEPTMFSLEELIILMCKDPDADVDLLKQVKPVLDKIVSEEISYRQQLEEKGLKFVTETETASKSSRKRNASAYNVRDQDECEYCRATLYLSKVRGMTGKKSSLCLEHALLLLNNPKYKEVNVGQLEVFVYMTVEELNDVTASVEARVGPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-