Basic Information

Insect: Autographa gamma
Gene Symbol: -
Assembly: GCA_905146925.1
Location: LR989853.1:7464180-7467539[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.4e-06 0.00031 21.6 0.3 1 23 359 381 359 381 0.97

2 7 0.0003 0.028 15.4 0.3 1 23 387 409 387 409 0.95

3 7 0.00012 0.011 16.7 3.0 1 23 415 437 415 437 0.98

4 7 0.00019 0.018 16.0 4.1 1 23 443 465 443 465 0.99

5 7 6.1 5.5e+02 1.9 0.1 14 23 476 485 472 485 0.84

6 7 0.00018 0.016 16.2 6.5 1 23 491 513 491 513 0.97

7 7 1.8e-05 0.0016 19.3 0.3 1 23 519 542 519 542 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.4e-06	0.00031	21.6	0.3	1	23	359	381	359	381	0.97
2	7	0.0003	0.028	15.4	0.3	1	23	387	409	387	409	0.95
3	7	0.00012	0.011	16.7	3.0	1	23	415	437	415	437	0.98
4	7	0.00019	0.018	16.0	4.1	1	23	443	465	443	465	0.99
5	7	6.1	5.5e+02	1.9	0.1	14	23	476	485	472	485	0.84
6	7	0.00018	0.016	16.2	6.5	1	23	491	513	491	513	0.97
7	7	1.8e-05	0.0016	19.3	0.3	1	23	519	542	519	542	0.96

Sequence Information

Coding Sequence: ATGCTAGACCCGATTGATACTATCGACATGAAATCATGTCGTATATGTTTGACAAACAAAAAACCATTATGTCCACTTTTCAGATATAAATTGTCTGGTAATTACGCTGAAATGCTTACAGCGATTGCCGACGTAAAGGTGTCATCAAATGATGGCTTGCCAGAGAAGATTTGCCTCAAATGCTGCACAACTTTGGAAAAGGCATACCTTCTTAAAACAGTGGCTGAAAGGTCGGATAAAAAACTAAGAAAAATATTGGCTAAAGAAAGAGAGAAGGTGCCAACCAAGAAAATTGCATTTGATTCATTCACTGACATCAAAAGTGAAATTGGACCTCTAACAATTAAGTCTGAACCAAAATGGGAAATGGAAATAGAGGTACCAGAAGGCAGTAGGCCCGTTGAGACCATGGATGGGAAAGATATTGTGATTGCTAACACAGTCATAAGAAAAGTAGATCCTAATGCTGAAGAGATTAAATATGACTGTTCTGATGATGTCCAACTAACTTGGAAAACAACAAGGACTAGTATTGATACTAAGCAAGATGCTAATATTGAATACTTAGATGATGATGTATTTCAAGAGGAAGATGCATTTCAAGATGATGATGACGATGATTATATTCCACCAGTTGAAAAACCTAAAACTAAATTTAAAAAACCAAAACTGTCTGACATCAAAGTGTTCAAAGGAAAAACTGTTGTACGGACTGTGAAATTAGTAAAGAAATTGAAGGAAGACTTTGATGGTGATTCAGGCAGATCCAGAGATGAAAATAAATCAAGATCCACTACAATAACCTGCTATCCAATTATGAAGAATGGTACTAGAGGTTCGCCTATTCTTTTGAAGCGACCAAAAGATGCAACTGTGCTAAAGGTTCATACTGGATATAAATCCAAAACACCAGGGTCATCATCTGAAAGTAATAAAGTTATGCGAAGAGAAAAGCCTGTGAGAATGGTGAGGACCGCAGTCAGTAAGCAGAGAGAGAAACTTGTTTGTCCTGTGTGTGGTATCCTAACTTACACCCTGGGCAATCATATAGCTACTCATCAAGAGAAAAAGAGATACACTTGTGCACAATGTCCAAGATCATTTGCACAGAAGAGTAATTTATTAGTTCATGCTAAGCAACATACAGGGATCAAAGATCACATTTGTGAAATATGTGGGGCTGGTTTTTACAGCCAGAAATCCTTGGTTAGACATAATTTAATTCACAAAGGAGACAGACCATTTTCCTGCAATTTGTGTACAAAGAGATTTATTGCTCGTTGTGATCTGAATCGGCACCTGCGCATACACTCGGGGTACAAACCATTCAAATGTAACACTTGCACAATGTCATTCAACGCGAAACATCAGTTGCAAAACCACGAGAGAATGCACACCGGGGAGCGGCCGTACACATGCCAGATGGCTGGACTGCGCCGCCATATGGCGATACATACTGGCGACAAAAGGTTCAACTGTGAATTCTGCTATAAAAAATTCACGCAAAGCCACCATCTGCAGAACCATTTGCTTATCCACACTGGCGATAGACCCTATACTTGCGAGGTATGTAATGTGGCGTTTAGTTACAAAGTGAACCTTAATAACCATGTGTCTAAAGTCCATGGTATCAACCTTAAATTCAAGTCAATACATACCGTAACGGAAGATGTTTTACGGCGGGAAATGGGAATGGTGAACGAGACGAGAGTTGCCATATCGCATATTATGCCGCAGTTGGGAGAAGTACCGACGCCAGCCGCTCATGAAACTGTACTATCGTTGTCCTGA
Protein Sequence: MLDPIDTIDMKSCRICLTNKKPLCPLFRYKLSGNYAEMLTAIADVKVSSNDGLPEKICLKCCTTLEKAYLLKTVAERSDKKLRKILAKEREKVPTKKIAFDSFTDIKSEIGPLTIKSEPKWEMEIEVPEGSRPVETMDGKDIVIANTVIRKVDPNAEEIKYDCSDDVQLTWKTTRTSIDTKQDANIEYLDDDVFQEEDAFQDDDDDDYIPPVEKPKTKFKKPKLSDIKVFKGKTVVRTVKLVKKLKEDFDGDSGRSRDENKSRSTTITCYPIMKNGTRGSPILLKRPKDATVLKVHTGYKSKTPGSSSESNKVMRREKPVRMVRTAVSKQREKLVCPVCGILTYTLGNHIATHQEKKRYTCAQCPRSFAQKSNLLVHAKQHTGIKDHICEICGAGFYSQKSLVRHNLIHKGDRPFSCNLCTKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQMAGLRRHMAIHTGDKRFNCEFCYKKFTQSHHLQNHLLIHTGDRPYTCEVCNVAFSYKVNLNNHVSKVHGINLKFKSIHTVTEDVLRREMGMVNETRVAISHIMPQLGEVPTPAAHETVLSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707349;
90% Identity: iTF_01342561;
80% Identity: -