Basic Information

Insect: Autographa gamma
Gene Symbol: -
Assembly: GCA_905146925.1
Location: LR989860.1:4118825-4131357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7e-05 0.0064 17.4 2.2 1 23 428 450 428 450 0.97

2 20 0.0037 0.33 12.0 0.6 1 20 456 475 456 478 0.94

3 20 1.8e-05 0.0017 19.3 5.6 1 23 497 519 497 519 0.98

4 20 8.5e-05 0.0077 17.2 4.1 1 23 525 547 525 547 0.99

5 20 3.2e-05 0.0029 18.5 5.3 1 23 553 575 553 575 0.97

6 20 7.4e-06 0.00067 20.5 7.4 1 23 581 603 581 603 0.97

7 20 6.3e-07 5.7e-05 23.9 2.9 1 23 609 631 609 631 0.97

8 20 8.9e-05 0.0081 17.1 6.7 1 23 637 659 637 659 0.97

9 20 8.8e-05 0.008 17.1 6.5 1 23 665 687 665 687 0.97

10 20 4.3e-07 3.9e-05 24.4 1.9 1 23 693 715 693 715 0.98

11 20 4.4e-05 0.0039 18.1 7.9 1 23 721 743 721 743 0.98

12 20 3.6e-05 0.0033 18.3 6.8 1 23 749 771 749 771 0.98

13 20 8.9e-06 0.00081 20.2 4.5 1 23 777 799 777 799 0.98

14 20 3.1e-06 0.00028 21.7 6.3 1 23 805 827 805 827 0.97

15 20 1.9e-06 0.00017 22.4 5.0 1 23 833 855 833 855 0.98

16 20 2.7e-06 0.00024 21.9 6.0 1 23 861 883 861 883 0.98

17 20 2.5e-05 0.0023 18.8 7.5 1 23 889 911 889 911 0.97

18 20 2.3e-05 0.0021 19.0 7.5 1 23 917 939 917 939 0.96

19 20 0.00064 0.058 14.4 0.3 1 23 946 968 946 968 0.96

20 20 0.99 90 4.4 3.6 1 23 978 1000 978 1000 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7e-05	0.0064	17.4	2.2	1	23	428	450	428	450	0.97
2	20	0.0037	0.33	12.0	0.6	1	20	456	475	456	478	0.94
3	20	1.8e-05	0.0017	19.3	5.6	1	23	497	519	497	519	0.98
4	20	8.5e-05	0.0077	17.2	4.1	1	23	525	547	525	547	0.99
5	20	3.2e-05	0.0029	18.5	5.3	1	23	553	575	553	575	0.97
6	20	7.4e-06	0.00067	20.5	7.4	1	23	581	603	581	603	0.97
7	20	6.3e-07	5.7e-05	23.9	2.9	1	23	609	631	609	631	0.97
8	20	8.9e-05	0.0081	17.1	6.7	1	23	637	659	637	659	0.97
9	20	8.8e-05	0.008	17.1	6.5	1	23	665	687	665	687	0.97
10	20	4.3e-07	3.9e-05	24.4	1.9	1	23	693	715	693	715	0.98
11	20	4.4e-05	0.0039	18.1	7.9	1	23	721	743	721	743	0.98
12	20	3.6e-05	0.0033	18.3	6.8	1	23	749	771	749	771	0.98
13	20	8.9e-06	0.00081	20.2	4.5	1	23	777	799	777	799	0.98
14	20	3.1e-06	0.00028	21.7	6.3	1	23	805	827	805	827	0.97
15	20	1.9e-06	0.00017	22.4	5.0	1	23	833	855	833	855	0.98
16	20	2.7e-06	0.00024	21.9	6.0	1	23	861	883	861	883	0.98
17	20	2.5e-05	0.0023	18.8	7.5	1	23	889	911	889	911	0.97
18	20	2.3e-05	0.0021	19.0	7.5	1	23	917	939	917	939	0.96
19	20	0.00064	0.058	14.4	0.3	1	23	946	968	946	968	0.96
20	20	0.99	90	4.4	3.6	1	23	978	1000	978	1000	0.98

Sequence Information

Coding Sequence: ATGAATCAGGAACACCATAATATGAACACGGGTGGTGGCCAGCCTCCGGGAACTTCTGAGTCGCAGAACCAAAGAGTGCAATCAACACAGCAACAGCAGCAAAATAACTTGCCTGCCACGACATCAGCCACTGATCTGCGAGTAAACTCAGCGGCTGTGAACGTCGCTTTGTCTAGTGTTGCGAAATATTGGGTGTTTACAAATTTATTTCCCGGACCTATACCGCAAGTGTCTGTATACGGATTACCTGCCGGTGCAAGGATTGAAAATGGAAAACCTGTTCAGGATCTTGGCCAGGCTCATGCCAGTATACTAAATGGGGATCCAAATATTATACTGGGGCATCATGCAGGGCAGTCCCAGGTCACTGTATCAGCGGCAGGTGGCCAACAGATCCCTGTCTCGCAAATTATTGCTACACAGTCTGGTCAGACACATGAAGCGCTTGTGGCTCACAGTCAGCAGCAGGCCGAGATGGCGGCGGCCCAGGGCAACGGCAACAACACGCAGGTGTCAGTTAGTGCGGGCCAGCCCACTCACCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACATCATTCACAACAACACCTCATGCAGCAACAGCTAATGGCTACAGCACGGCCGGAGCACAGCAACCAGCAGATTCAGCTGACTGTGAGTGAAGATGGCATAGTGACAGTAGTGGAGCCTGCTGGCAGCAAGATGGTGGACAAGGAGGAACTGCATGACGCGATCAAGATGCCCTCCGACCATACACTCACTGTGCACCAGCTGCAACAGATTGTGGGACAACAGGTGATAGACAGCGTAGTACGCATAGAACAAGCGACTGGAGAGCCAGCCAACATACTTGTGACTCACAATCCCGACGGCACGACATCGATAGAAGCGAGTGCAGCTGACCCCCTAATCGTCAAGGACGAGAAGAGCGCCAACAAAATAGAGACAGCACAGTTCGCGATACCAGCGGAAATTAAAGATATCAAAGGGATTGACTTAAAGAGTGTGGGTGCCATGGGGATGGAAGGTGCTGTCGTGAAGATATCGGCCGGTGCTTCAGAACACGACCTCCACGCCATGTACAAGGTGAACGTCGAAGATCTGTCACAGCTCCTTGCTTACCACGAAGTGTTCGGAAAGCTCAATTCTGAAGGACAGCAACAAGCCAAGGTCATTAGCGAAGTAGAAGTGGAAGCAGGTACCAGCGCCGCCATGTCAGAAGCGGAATCCTCGCCGGGTCATCATTCTTGTGATATTTGCGGGAAAATATTCCAGTTCCGATACCAACTCATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCGTTCACGTGCCAAGTATGCGGTTCTGCGTTTGCCAATCCTGTGGAACTATCTCGACATGGAAAATGTCATCTTGCCGGCGACCCGAACGAAAGACACGCTAAAAGAATGGCTCAAGATAAGCCATATGCTTGCACCACTTGCCACAAAACCTTCTCTCGCAAAGAACATTTGGACAACCATGTTCGAAGTCATACTGGCGAGACTCCATACAGATGCGAGTTCTGCGCGAAGACTTTTACCCGCAAAGAGCACATGGTGAACCACGTGCGAAAACACACGGGCGAGACTCCTCACCGTTGTGATATATGCAAGAAGAGTTTTACTCGTAAGGAGCACTTCATGAACCACGTTATGTGGCATACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCGCATACAAACGATACCCCGTTCCGATGCGAATTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAAACCCCGCACCGCTGCGACTTCTGTTCGAAGACGTTCACCCGCAAGGAGCACCTGCTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCAGCAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCGAAGGCCTTCACTAGGAAAGATCATCTTGTAAACCACGTTCGCCAGCACACCGGGGAATCTCCTCACAAGTGCTCGTTCTGCACAAAGTCTTTCACCCGCAAGGAGCACCTGACGAACCACGTCCGACAGCACACGGGCGAGTCGCCGCACCGCTGCACCTTCTGCGCCAAGTCCTTCACTAGGAAGGAACATCTTACCAACCATATCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTTCTGTCCGCGGGCGTTTGCGCGCAAGGAGCACCTCACCAACCACATCCGCCAACACACCGGCGTCACGCCGCACTCCTGCTCCTACTGCAACAAGACCTTCACCAGGAAAGAACATCTCGTTAACCATATTCGACAACACACGGGCGAGACTCCTTTCAAGTGTACGTACTGTTCGAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCACGTCAACCTTCACACGGGAGAAACGCCCCACAAATGTCCCTTCTGCACCAAAACATTCTCCAGAAAAGAACACTTGACCAACCATGTCAGAATTCACACGGGTGAGTCGCCGCACCGCTGTGACTTCTGCCAGAAGACATTCACTCGCAAGGAGCACCTGACCAACCATATTAAACAACACACCGGCGATACTGCGCACGCCTGCAAGGTCTGCTCGAAACACTTCACTAGGAAGGAACATCTTATTACGCACATGAGGTCGCATAGTTGTGGCGAAAGGCCATTCAGTTGCGGTGAGTGTGGTAAATCGTTCCCGTTGAAAGGCAATCTACTGTTCCATGAACGTTCACACAACAAGGCCAATGCCGGTAATAGGCCCTATCGGTGTGGTGTTTGCGCCAAGGAGTTCCTTTGCAAAGGTCATTTGGTATCTCATCGACGCACTCACGCCGAAGGAGAAGAAGGTGCTGCGAGCACTGAAACTCCTGCTGAAACAGAAGATTGTACCGATTGTAATAAATGTGTAAAGGCTGAGCCAGAACGAGCAAATGAAAGAAAACTAGAAGTCAGAACTACGGCGGAAACGAGGCCAGCAGAAAGCAATGTTGCACAAACTCAACCTAACACTGCTACTGCAATGCAAATAACAAACCAGCAAGTCCGCGCGGGTGTAGCCGGCGTGGCGGGAGTGGCGGGCGTGGGCGCGGTGGGCGGCGTGGCGGCGGCGGCGGGCGCCACGTTCCCGCAGCACCACGCGGGCGCCGGCCTGGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQEHHNMNTGGGQPPGTSESQNQRVQSTQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSQQQAEMAAAQGNGNNTQVSVSAGQPTHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHLMQQQLMATARPEHSNQQIQLTVSEDGIVTVVEPAGSKMVDKEELHDAIKMPSDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVISEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFARKEHLTNHIRQHTGVTPHSCSYCNKTFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHIKQHTGDTAHACKVCSKHFTRKEHLITHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKANAGNRPYRCGVCAKEFLCKGHLVSHRRTHAEGEEGAASTETPAETEDCTDCNKCVKAEPERANERKLEVRTTAETRPAESNVAQTQPNTATAMQITNQQVRAGVAGVAGVAGVGAVGGVAAAAGATFPQHHAGAGLAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707182;
90% Identity: iTF_01030446;
80% Identity: -