Basic Information

Gene Symbol
-
Assembly
GCA_905146925.1
Location
LR989871.1:4258429-4260864[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.2 3.9e+03 -1.4 0.0 22 33 250 261 247 266 0.80
2 5 1.5e-09 2.6e-06 28.0 0.1 1 44 281 326 281 328 0.94
3 5 3.4e-08 6e-05 23.6 0.3 2 44 335 381 334 383 0.94
4 5 1.7e-08 3.1e-05 24.6 0.0 1 41 387 427 387 431 0.95
5 5 0.00043 0.75 10.5 0.0 3 46 439 484 437 484 0.94

Sequence Information

Coding Sequence
ATGGAACACATGGAAGTGGACAGTGACAGCGATGATTATGCTACTGATGAGGAGCTAGACTCTCTACAGAAACTTGCGGCGGTGTTAGAAGTAGAAAACGAGGGTGAGCCTGACCCAGAGCCAGCACCAATCGCACCACAGTTAAAAGCCGCAACCCCTCTACCCTTTGTGGTGTCGCAACATTCGACAACACAAAAGTCTCAACGAAGCTCCAAAGTGAGCACACAGTCATTAGCGACACTCAACAAAATAGAAACTGCCTTATCATTCAACAAGTTACAGGAAGAAAAACTTCGGAGACTAGAAGAAGATCTCTTAAAACGGTTAGGGGAATGTCGACGAAGACTTAGGAATGTCCAAGATACGACTCAGCCGTTGGGGGAAAGGACTGAGGTGTTCCGATATATTAACTGTGGCCGACCTTACTTCAAGGATCGCCAAAACTTCCCGGCCCCAGACAATGAGGATACTTTGCTGTCAAAAACACAGATGTATGACTTCTCCCTTGTCTTCTCAGTGCCTGGATGGACGGTCAGGGATAAATCACAGTTCAAAACAATGATCCATAAAATGTCCATAGAAGAAAGGATAGATGAATGTAAGTCAAAAATTGCAGAACTTAAACGAAGAACCAAAGGTACAACAAACAAGAAAGTAGAAGCACAAATAGCATGTTTAAGAAGAAAAATTGAAAAACTACCAAGTTTGCCTTTAGCTGAAGTAGCACTTCCATTAGACAAGGAGTATGACTGGGACTTGTTGGCCAATAAGCTGAACCGAAGACATACAGCTCAGGAATACCAATCACTTTGGAAAATATTCTACCATCCATCCATAAACAAGAAGAACTGGACTACTTCTGAACATGATATGTTAAAGAAATTAGCTTTAGAAAATAATTTACAGGATTGGGATTATATAGCTGCTAAACTAAATACAGGAAGAACTGGCTACCAGTGTTTTGTATATTATTGTACAAATACAGGCAACTCATTTGCTGGGAAAAGATGGACTGAGGAGGAGGTTACATATCTTAGAAGATTGATAGAATATTTTAAAGAGGAAAATTATATTCCCTGGGGCAAGATAGCTGCAGCTATGGAAAACAGAACTAAGCTACAAATTTATAATAAATATTTGAGACTGATTGAACAAAGAAAAGGAAGGTTCCTGCCCGAGGAGGATGCTGTTATCCTCAACTGTGCTGAAAGGTTTGGATCTAATTACAGGAGAATGACAAATTACTTGCCAGGCAGGTCAATGGTCCAAATACGAGCGAGACATCAAGTCCTGAGTAAATTGAGAGTCTCAACTGTTTGGACAGTAGATGATGATAGAAAACTCATTCAAATAATGGCCAACCAAGACTCAGCTATGAACTATTCAACTGCCACTCAATATTTCCCGGGTAGGAACAGGATAAACATTAGATCTAGGTATATTACTTTATTGAAATGGATGAAAAGGCATCCTAATCTGGATGTTGAACATGCACCGCGTCGAGGCGCGCGACGACTGAATCATGGACAAGCTAGCAATACTTTAAACTTGGCAGTTGAAGGTTTGAAGAACACCTTAAATACAGCAGTTGAAACAAAATCAGTTAGAAGAAAGATTACAAAAGATTCACCTGAGTCAGACATAGAGGACGCTATTATAGCTATTCTTGTCAACGAATTGGTCAGAGATGTAGAAAATAAGAAAAGTCAAGAGGAATCACAATTATATTTAGATAAGAATCATGTTGTATCATATGAGCACTTAAATATGACAAACTTGCGTAAATGTCTTATTATGCTAAATTCTCGTTTGAGTAAGACCCTTTATGCCGAGAGCAAGTATAAAAAGCAATATCCCAATTTGGGAGAGAGTGTGAATGATGTATCTCTAGTAAAAGTGAAGTCGTACTCTCGGAAGGATTCAGTAACAACTTATAAGGTGGCAGATGGGACTCCTAATATATGGGGCACTCCCATCCTTCCAACGCGGACCTACGTAATGCCTCCTCATTACGCGAATATTACTGGAAGCAGGACAATCATGACTTATGTGTCTTCTAAAGGAAATTATTTTGATCAAGTTAATTTTAATGTAATAGTGAAAAAGTACCCATTGCTGAAGCAACAGTTAGACTTGCTGACTGAACGTTTTTATTTGTTATTTACATGGCCTTTGCTTTTATCCAATGAAGGACCGCTTGACATAGAAACTGTGGGGTCAAGTAGATTAAATTCCAGATTTATAAGGCCAGCACCATTGCCTCAGCCCCCTGCAGTGACAATAAACATGAAATGCATTAAGAAATTTCATAATGTCCAAGTTACTGAGGTGATAGATCTTAATGAAAAAGAGAAAAGGCGAGAAAAGGATGAATTGGCTGTTGATGAAAAAGTAAAAGTTAGTGGTGAAAACAGTGAGAAATCGTGCCAGGTATAA
Protein Sequence
MEHMEVDSDSDDYATDEELDSLQKLAAVLEVENEGEPDPEPAPIAPQLKAATPLPFVVSQHSTTQKSQRSSKVSTQSLATLNKIETALSFNKLQEEKLRRLEEDLLKRLGECRRRLRNVQDTTQPLGERTEVFRYINCGRPYFKDRQNFPAPDNEDTLLSKTQMYDFSLVFSVPGWTVRDKSQFKTMIHKMSIEERIDECKSKIAELKRRTKGTTNKKVEAQIACLRRKIEKLPSLPLAEVALPLDKEYDWDLLANKLNRRHTAQEYQSLWKIFYHPSINKKNWTTSEHDMLKKLALENNLQDWDYIAAKLNTGRTGYQCFVYYCTNTGNSFAGKRWTEEEVTYLRRLIEYFKEENYIPWGKIAAAMENRTKLQIYNKYLRLIEQRKGRFLPEEDAVILNCAERFGSNYRRMTNYLPGRSMVQIRARHQVLSKLRVSTVWTVDDDRKLIQIMANQDSAMNYSTATQYFPGRNRINIRSRYITLLKWMKRHPNLDVEHAPRRGARRLNHGQASNTLNLAVEGLKNTLNTAVETKSVRRKITKDSPESDIEDAIIAILVNELVRDVENKKSQEESQLYLDKNHVVSYEHLNMTNLRKCLIMLNSRLSKTLYAESKYKKQYPNLGESVNDVSLVKVKSYSRKDSVTTYKVADGTPNIWGTPILPTRTYVMPPHYANITGSRTIMTYVSSKGNYFDQVNFNVIVKKYPLLKQQLDLLTERFYLLFTWPLLLSNEGPLDIETVGSSRLNSRFIRPAPLPQPPAVTINMKCIKKFHNVQVTEVIDLNEKEKRREKDELAVDEKVKVSGENSEKSCQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00186128; iTF_01221496;
90% Identity
iTF_00186128;
80% Identity
-