Agaa024760.1
Basic Information
- Insect
- Autographa gamma
- Gene Symbol
- -
- Assembly
- GCA_905146925.1
- Location
- CAJHUD010000003.1:132257-133042[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-08 2.5e-05 24.4 0.0 1 40 20 59 20 61 0.91
Sequence Information
- Coding Sequence
- ATGGAGCTCCCAAATAATTTGCAGTCAACAAAAAAAAATAAAAAGACTGTCCAGTACACAGAAAAAGCACTGAAAAAAGCTCTCGATGATATCCGAAAAGAAGGGAAGGGAATAAGAGAAACTTGTAGACTGTATCAGATCCCTAGGACCACGATACAAGATCGCCTTAGTGGGAAGAGGCGTGATACAATCGAGACAAGGGGACCAGATCCTGTACTGGGTATCGAAGGCGAGAAACAAGTTAAAGAGTGGGTTTTGGACATAGCAAAATGTGGATTCCCGGTCAAGAAACAGGAGCTGTTGGACACAGTACAGAAAATTGTTAAAGATTACGGAACAAAGAATCCTTTTAAGGATGGTCGTCCGGGGCAAACCTGGTACTCAAATTTCCTAAAACGCCATCCCGATATATCATGCCGTGCTGCCGAAGGAATTAATAAAGCCAGAGCGAGGGTAACTGAAGAAGCCATTCGTGCTTGGTTTAATGATTTTAAAGAGTTCTTGAAACAAACTAATAATCAAGATATCTTAGAATGCCCAGAGCGACTATTTAATGGTGATGAAAGTGGCTTCTCTATGTGTCCAAAAACCGGAAAGGTCTTAGCGCCGAATGGATACCGAAATTTATACCAGATCAAAGCAGGAAATGAAAAGGATAACTTAACCGTTCTGATCACCTTCAACGCCAGTGGCCAAGTAAGTCCACCGCTTATTGTTTTTCCCTATATACGTCCACCACGAGCCGTTGTAGAGTATGCCCGAAGAATGGTGTCTTGGCAAATCTGA
- Protein Sequence
- MELPNNLQSTKKNKKTVQYTEKALKKALDDIRKEGKGIRETCRLYQIPRTTIQDRLSGKRRDTIETRGPDPVLGIEGEKQVKEWVLDIAKCGFPVKKQELLDTVQKIVKDYGTKNPFKDGRPGQTWYSNFLKRHPDISCRAAEGINKARARVTEEAIRAWFNDFKEFLKQTNNQDILECPERLFNGDESGFSMCPKTGKVLAPNGYRNLYQIKAGNEKDNLTVLITFNASGQVSPPLIVFPYIRPPRAVVEYARRMVSWQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -