Agaa020145.1
Basic Information
- Insect
- Autographa gamma
- Gene Symbol
- kn
- Assembly
- GCA_905146925.1
- Location
- LR989858.1:8224234-8238084[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-54 2.9e-50 171.7 0.0 11 138 67 184 58 189 0.93
Sequence Information
- Coding Sequence
- ATGATTCGGTCGGACGAGTTGAACGCGGCGGGCGGGTACACGGGCTCCCCGTGGCCGCCGCTGGAACTCGACCCCGTGGGATGGGGACGAAAGCTGTATCCTTCGGGAGCGCCAAGATCCTCAGGCGGGCTGATGTTCGGCCTGCACCACCAGGAGGCCGCGGGCGGGCTGCACGCGCAGCCGCGCGGCCCCGTCACCTCGCTCAAGGAGGAACCGCTCACCAGGGCCTGGATGACGCCGACCTCTTTAGTTGATAATACCAACAGTGTAGGGGTGGGCCGAGCGCACTTCGAGAAGCAACCGCCCAGCAACCTGCGCAAGAGCAACTTCTTTCACTTCGTGGTTGCTCTGTATGACCGCGCTGGGCAACCAGTCGAGATCGAGAGGACCGCCTTCATCGGATTTATTGAGAAAGATCAGGAAGTTGAAGGTCAAAAGACGAATAATGGCATCCAGTACAGACTTCAATTACTTTATGCAAACGGTATCCGACAAGAACAAGACATATTCGTTCGTCTCATCGACTCCGTCACGAAACAGGTAACATTCTATCTTACAACTCTCCCACAACTGCACCCTGTACCAAGTGTCCCCCGTACCACGTGA
- Protein Sequence
- MIRSDELNAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVTFYLTTLPQLHPVPSVPRTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01564346;
- 90% Identity
- iTF_01439681;
- 80% Identity
- iTF_00282055;