Agaa023652.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Autographa gamma
Gene Symbol
jarid2b
Assembly
GCA_905146925.1
Location
LR989849.1:2703512-2722409[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-20 1.4e-16 61.2 0.1 6 88 1213 1292 1209 1293 0.92

Sequence Information

Coding Sequence
ATGCGTGCACGGTCTCGTCGCGTTCTCGCCCAGCGCAAGTTCGCGCAGGGCGCCTACGTGCCCCCGAGCGCTGCGCCCGCGCCGCCTACCAACGGCGACCGCCGAGACAACAACCCCTCGGCTAGGAACTTCATCATCCAACACCAAGTCGGCCCATCCGTCTTCGTTGACTACATATCTTATCAAGCATTGGAATTACATCACAAAGGCCTACAACCATTCGTAATGGTAAAAAGGCTTGAAGTGCCGCCTAGTCAAAGAACCAGGGCTAGGAGGACTGAGCTTATGAGGAACCGAGAGCTTGTTAGAAACAGGGAACTAGATAGGAATAGAGATATACATGATAAGAAAACCAGAGAAAACTTACAGACTACCGCAACTAGAGAGAGTACTAGAAACAAGGAGAGTAATAGAAGCAAAAATATTGCAACAAACAAAGACAAAAATAATGACAATACTACAGCAAAAGATAGTTCTAAGAAAAATAATCTTCGACAGACATCTGTAAAGGCGTTAAAAGAGATAGTAAAATCCAAAGAAACTCCGAATGAAAAAGAAATTATCAAGAAAAAAGATTTAGCTAAAAACAAGTTAAGTAAAACTAAGGAGAAGAGTAGTTTATCGACGAATAAATCAAATCGTGAAAAGCCTCTTCCTATTAAAAAGCCAAAGTCGACCAAACCCATGCATGTGATGTCACTGCGTTCAAAGCGACAGAGCAAACAGGACTTCAATAAAAAAGCAGTGGCGACCCGTGCTACAAAACGACTGGCAGTGGCTAGGCGTAAAGTCGCTAACGCCTTAAAGGATACAACTTCACATGAAAAGCCAAAGCAGAAGAGCACTGACGCTCTTAAAACACCAAAACGCGAGCCAGTAGCCGGGCCGAGTGGATCAAATAAAAAGAAAATTACTAAGACACGTTCTCCGAAAACGAACACTAACCCTTATGTCTTGTTACCCAACATTGCCCCAACGGCACCTGCGCCCGCCCAAACTTCAACGGAAACACAAACAAAACCACCTGAACCGCCTTTCTACAGCACGCCGCCAAACATTTATCAATGGATGAATAAATCCTTTGATGATGAGCAAGGTCTTCTCAAAGTGTTAAAGAGCAAGCCTGCACCTTGGGCCGCAGTACAACCAAGTTGCCCTGCGCTGCGATGGCACACCGTCAAGGAACTAAATAATGCCGACAAAGCTCAACTGGAAGCCCGCTGCTTAAAGTGCGGCGCCTGTATGAGAATAGATAAATTAATGAAGATCTCAGAGACCCTCAAATCGCTGGTCAAGTTTGACGTATCAGGAGATGATGATGCTAGCACCGCTGAGCCCAATAAACAGGAAGATAAGGTCTCGTCAGACGGAACTATTTACATGGAGCTCTTACCAAAAATGGCTAACAAATTGATGAAAATCCGCACACATAACGTGCTTGGAAAAAACATGCTGTCTGCTTGTCTGATACCAAGAGCTCATGCGCAACAGACCAAAGATCTTTCGTTAGTAGAGCAAGAGGGTCTACTAGAACAAATAAACGCGACCCTGACGGCAAGCACGCAGGCTGCTGAACGCTCAGGAAGGCCGGTTATAGGATCCAGCTCTGACACTGATAGCTCGACTGGCGAGCCTGATCCGAAAGTCCGACCCACTTTTAAAATGAAACGACAACGGCGTCAGTCCGTGTGCGCGGACTTGGCAATGCAACCTCAAACACAACGCAAACGACGTCAATCCGTTTCCGCTGAATTGGCATCGCAGCAGCAGGAAGAACAACAAAAGAGTGATGTGGCGATGCAGCCACGACCGCAAAGACAGCGGCGAAAATCAATGTGTGCCGAATTGGCGATGAAAGAAATGAAAGAACAACAACAGCGTGAGCTGGCTATTAAAGAACAGCAGGAAAAGCATAAGCGCGAGTTAGCTATAAAAGAAAAAGAAGAACAACAGAGGAAAGAAATGACTAAGCGACTACAGGAACAAAGGCAACGCGAATTAGCGATAAAAGAGCGCCAAGAACAGCAAAGGCGGGAGTATGCGCAGCGGCAGCAAGAAGAGCATCAACGACGAGAAAGCGAAAAGCAACAGGAACAACAAAGGCGTGAGGCCGAAATGCGGCGCCAACAAGAACAGCAGCGGTATATGTTCCAGATGGCAGGGGCGCAACGACCACTACAAAACCGTGACATAGCTTACTTGACTATGGCTTTACAGGCGGGACCAAATCAACGTGTGCGTGAAACGGAGGCTGGCGAATTTGTGGTAGAGAATCTAGGTACTACCTCTAATAAAAAACCAGAGGAAAATGTGCAGCCCCAACCACAACAACAAAAACGTGATAACGTTCCGCAGCAGCAAGAACAGCGACAACCTAAATCAGTTCCCGAGGTAAAAGTACAGCCGCAACCACAACGTCAACGACGCCAGTCAGTTTCGGCGGAACTGGCGGCCAAGCAGCAGCAGCAAGAACAACGACAACGACAACCTAAATCAATTCCTGCGGTAAAAGTACAGCCGCAACCACAACGTCAACGACGCCAATCAGTTTCGGCAGAACTGGCGGCCAAGCAGCAGCAAGAACAACGACAACGCGAATTAGCTTCCTCCACAACGGCTACACGGTCGCCACGACAACGACTGGGGCGTCAAACAGTATCTGCGGAATCGGCGGCCATGGAGCAATCACAACAACAGACTCATGAATCAGTTAGCAAAGAAAAAGCGCAGGCGCAACCACAACAGCGAAAATCCGGTAGTGGAGAATTACCGATGCCGCAGCGGCGACAAAGGCGCCAATCCGTTTGCGCGAAATTAGCTGCGGAGGACCTGGTTGCTGAGGATTCAGATGACGAACCTATCATTCAACGCGACATTCAAGCGGACCTCGCATCAATGGATAGTGATAGGTTATGCGCAGTCATTGACGAAGTGACGGCAGATTTTGACCCAACTCAAATTCAACTAAGCACGCCGATTTCTTCCATCTTAGAAGTGGATAGGCGAACTGAATTAGAGAATATCGAAGAGCCACTTCGCAAACAGACAGGAGAACCGACGGAAACCTATGAATTCCCATTGGTCAATGAAGAAACGCCACTGCTTCATGACATAAAACGTATCTTCCAGTCGGTGGGAAAGCCTTCGCAACAGGAACGAGTTGCTGGAACATCGGGTAGAGATTCACCGGGGCTGATAGGATCAGAGTCCTCCAGCTTGCATCTGACTTATGAGGATTCGGTTAATGGAGACGCGGCTTCAGAAGCCCGCATGATGGCGGAAGTCGATGAACAGGCTAGAGCCTTAGAGAAGGAAAAGGACGCGAAAGGAGATAATTGCCCAGATAAAGGCCACTCCTCAGGAACCGATCCTAGTGCCAGCAGTGGGTTCCCGAACAGCGCGGACACCGCTCAAATCGTTGATGCTCCCGTGTTCCACCCTTCACTGGAAGAATTTGATGATCCCATTGCCTACTTTGAAAAGATCTTGCCGATTGCTGCCAAATATGGCATCTGTAAAGTTGTGCCCCCTGACGGTTGGGAGCCTAAGTGTAAGATAAATGAAGAGATTCGCTTTGACGTCACCAACCAATACATCTCTCGTCTGTATTGTCGCTGGGGACCGGCTTCGCGCGAGCTGAGTGCTCTCAAACTATGCCTGCAGCTACAGAACGTCAACGTAACCCGCCCGCCGTTGGTCGACGGGGTGGAGGTGAACCTTCCTAAGTTGTACCACCTGGTGCAGCGTCACGGTGGCCTGGAAAATGTGATTAATAAGAAGCGCTGGGGCAAGGTCGCCGAAGAGATGAGGTTGAACAAGGCTCCGGTCATCGAGAGGAAACTGGACCAACTATACGTGAAGTACTTGCTACCTTACGCCACGCTCGATCATCAGGAACGCCAGGAGATAATGAAGAAGGTAGAGATGGCCTGGCACCACAAGAACCAGAAGTTACTCGACCGGGCCACGAACCCGCTGCACCGTCAGAAGCGAATGCTCGGCGAGTCCGAGTCTTCCGACGGCGAGACGGAAGACGAGGGCACGGCCAATGCCCTCGCCGACGCCGAGGATTGCGTCGTGCCCGGACTGTGCATGAACTTCGCCAAGTTTAAGAAGGTTGCCACCAACGCATACGAGAATCACATCGGCATTGAGCGTCCGGGCGCTGACATGCCGTCTATCGAGATCATTGAGGACCGCTATTGGCGGCTCGTCGTCATGGGAACCGAGCACCTGTGCGTCAATACTGCTGCCATCGACACCGGCGAGGAGGGACACGGCTTCACTAAGAATAAGAATGATTATTATGGACGCCATCCGTGGAATTTGAAGATGTTCAGCCAGAACCGCGGCAATATTCTGCGCTATTTAGGCCCAGTGCTGGGCATGACTGTGCCCACTCTGCACTTGGGCATGATATTTTCGACGAGCTGCTGGCACAAGGATCCCCACGCTCTGCCGTGGACCGAGTTTTTGCACAATGGACCAGGGAGGATCTGGTACGGAATACCGGACGATCAATCGGATAACTTCCGCAAGGCAGTCGAGACTCTAACTCCGACGTCATGCCAGAACAAATGCCTGTGGCTACCTACAGACATAGCTATGATACCGCCGTCGATACTGCGCGAGCACAACGTGTCGCTCTCGCGCACGGTGCAAGACCCCAACGAGTTTGTGCTCGTCTTCCCGAAGGCTTACTCGTGCTCAATAAGCACGGGTTATACAGAATCTGAGAGCGTATATTTCGCTCCTCGCTCCTGGTTGGAGAACCTCGAGCAAGTCATTCAGGAAACCCGCGAGAGCTGCGAGCCCACAATGTTCTCTCTGGAACAACTACTCATCCTGATGTGCCAAGACCCGGACGCGGATGTCGATCTACTCAAACAAGTGAAGCCTGTGTTGGACAAGATCGTCAGCGAAGAAATTTCCTACCGCCAGCAGTTAGAAGAGAAAGGCCTCAAATTTGTAACCGAGACTGAGACCGCTTCGAAGTCAAGCCGCAAACGCAATGCGAGCGCGTACAATGTGCGCGATCAAGATGAGTGCGAATACTGCAGGGCTACTCTGTACCTCTCAAAGGTACGTGGCATGACCGGCAAGAAGTCTTCTCTTTGCCTTGAGCACGCGCTGCTACTGCTCAACAACCCAAAATACAAGGAGGTGAACGTAGGCCAGCTGGAGAACACGAGCCCTGCGACGCGCCCGTCGCACCCGGCCTGGCAACCCCAGCCCGGACCGTCCACCCAGCAAGGACAACCCGCCCAGCATGGACAACCCGCCCAGCCCTCCCAGCCCAACCAGCCTGACCAGCCTAACCAAGTGAGTGATGCTCCCCTCGACCTTAGCATGAACAGTGCCAACCCGCCGCCAGATCCCGACGACTCCGACGACAGCGACGAGTCCGACACAGACGAACAACTCAACGATATCGTCAGTGGAATGGTTCTAGACGAAATGTTCGATTCCTTCGATTACTTCGGTCTAGGTGACGAGTACTATGATTATTACCCCGTTCTTATTCTACCGTTCCGCGATTACACCTTCAAATTTTACCCCGTGACCGCCGTTGTGTATGCGTCGGGCTATTGGTGGCACGTGATACGGGAAACGTATATCAACTACTTGTGGTGTAACTTAGCGCCTCCGTACCCGGCACATTACCCGTACACATTTCCATACCCGTTTCGTAGATACGAGGGCGCTGTTTTCAATCCAGACTATGCGCTCAGTGATAATCTTAGAGGCATTCACGTTGTACGCATGAGGTCGCTCGCTGAGGCGAACTTTCCTTTAGTAGATATACCACAACCGATTCGATTCAGTCTCGGTCCGGGTATATTTGGGCCTTTCGACCTGTTGCCACGGCTGCCGCTGCCGCTGATGCCGCCGGAAAGCGACGAAAACGGCGCAGAAATCGTAGACAATAATAATGTAGATCCAATGCCTTTCGACAACGAAGACCCCGCTCCTTTGGAAAATGTCAATCAAATGCCTTTAGACAATGAAGACTCGATGCCTTTAGACGGCGGAGATCCGATGCCTTTAGACGACGTAGATCCTATGCCTTTAGACGATGTAGATCCCATGCCGTTAGACAGTGTAGACCCGATGCCTTTAGACGATCTAGATTCGATGCCTTTAGACAATTACGATCTGATGCCTCTAGACGATGCAGACCCGATGACTTTCGAAAATCTCGATCCGATGGTTTTAGATAATGTAGATCATGTTCCATCGGACAATGGTGATTCAATGCCACTAGACAATAGTGATGCGATGGCCTTAGACAACGGCGATCCAATGGCCTTGGACAACGTTGATGCGATGGCTTTGGACAACGTTGATGCCATGGCTTTAGACATTGTTGATCCTGTAGCCAACCAGGATGAGCAACGCCCGCTACCTAACTACGAGGCAGCCGGGTTTGCGCAATACGCTCCCGGCCACGGTCACCCATATTACTACTTTAGGGACGTGACGACCCCATCGCCCGTTGCTGCAACGGTTGCAGAGTCATCTCTGCAGCTGTTGGAGCGGCGCAACAGTCAGCACCAGGAAGCGACGACTTGCCTTAATCGCTAA
Protein Sequence
MRARSRRVLAQRKFAQGAYVPPSAAPAPPTNGDRRDNNPSARNFIIQHQVGPSVFVDYISYQALELHHKGLQPFVMVKRLEVPPSQRTRARRTELMRNRELVRNRELDRNRDIHDKKTRENLQTTATRESTRNKESNRSKNIATNKDKNNDNTTAKDSSKKNNLRQTSVKALKEIVKSKETPNEKEIIKKKDLAKNKLSKTKEKSSLSTNKSNREKPLPIKKPKSTKPMHVMSLRSKRQSKQDFNKKAVATRATKRLAVARRKVANALKDTTSHEKPKQKSTDALKTPKREPVAGPSGSNKKKITKTRSPKTNTNPYVLLPNIAPTAPAPAQTSTETQTKPPEPPFYSTPPNIYQWMNKSFDDEQGLLKVLKSKPAPWAAVQPSCPALRWHTVKELNNADKAQLEARCLKCGACMRIDKLMKISETLKSLVKFDVSGDDDASTAEPNKQEDKVSSDGTIYMELLPKMANKLMKIRTHNVLGKNMLSACLIPRAHAQQTKDLSLVEQEGLLEQINATLTASTQAAERSGRPVIGSSSDTDSSTGEPDPKVRPTFKMKRQRRQSVCADLAMQPQTQRKRRQSVSAELASQQQEEQQKSDVAMQPRPQRQRRKSMCAELAMKEMKEQQQRELAIKEQQEKHKRELAIKEKEEQQRKEMTKRLQEQRQRELAIKERQEQQRREYAQRQQEEHQRRESEKQQEQQRREAEMRRQQEQQRYMFQMAGAQRPLQNRDIAYLTMALQAGPNQRVRETEAGEFVVENLGTTSNKKPEENVQPQPQQQKRDNVPQQQEQRQPKSVPEVKVQPQPQRQRRQSVSAELAAKQQQQEQRQRQPKSIPAVKVQPQPQRQRRQSVSAELAAKQQQEQRQRELASSTTATRSPRQRLGRQTVSAESAAMEQSQQQTHESVSKEKAQAQPQQRKSGSGELPMPQRRQRRQSVCAKLAAEDLVAEDSDDEPIIQRDIQADLASMDSDRLCAVIDEVTADFDPTQIQLSTPISSILEVDRRTELENIEEPLRKQTGEPTETYEFPLVNEETPLLHDIKRIFQSVGKPSQQERVAGTSGRDSPGLIGSESSSLHLTYEDSVNGDAASEARMMAEVDEQARALEKEKDAKGDNCPDKGHSSGTDPSASSGFPNSADTAQIVDAPVFHPSLEEFDDPIAYFEKILPIAAKYGICKVVPPDGWEPKCKINEEIRFDVTNQYISRLYCRWGPASRELSALKLCLQLQNVNVTRPPLVDGVEVNLPKLYHLVQRHGGLENVINKKRWGKVAEEMRLNKAPVIERKLDQLYVKYLLPYATLDHQERQEIMKKVEMAWHHKNQKLLDRATNPLHRQKRMLGESESSDGETEDEGTANALADAEDCVVPGLCMNFAKFKKVATNAYENHIGIERPGADMPSIEIIEDRYWRLVVMGTEHLCVNTAAIDTGEEGHGFTKNKNDYYGRHPWNLKMFSQNRGNILRYLGPVLGMTVPTLHLGMIFSTSCWHKDPHALPWTEFLHNGPGRIWYGIPDDQSDNFRKAVETLTPTSCQNKCLWLPTDIAMIPPSILREHNVSLSRTVQDPNEFVLVFPKAYSCSISTGYTESESVYFAPRSWLENLEQVIQETRESCEPTMFSLEQLLILMCQDPDADVDLLKQVKPVLDKIVSEEISYRQQLEEKGLKFVTETETASKSSRKRNASAYNVRDQDECEYCRATLYLSKVRGMTGKKSSLCLEHALLLLNNPKYKEVNVGQLENTSPATRPSHPAWQPQPGPSTQQGQPAQHGQPAQPSQPNQPDQPNQVSDAPLDLSMNSANPPPDPDDSDDSDESDTDEQLNDIVSGMVLDEMFDSFDYFGLGDEYYDYYPVLILPFRDYTFKFYPVTAVVYASGYWWHVIRETYINYLWCNLAPPYPAHYPYTFPYPFRRYEGAVFNPDYALSDNLRGIHVVRMRSLAEANFPLVDIPQPIRFSLGPGIFGPFDLLPRLPLPLMPPESDENGAEIVDNNNVDPMPFDNEDPAPLENVNQMPLDNEDSMPLDGGDPMPLDDVDPMPLDDVDPMPLDSVDPMPLDDLDSMPLDNYDLMPLDDADPMTFENLDPMVLDNVDHVPSDNGDSMPLDNSDAMALDNGDPMALDNVDAMALDNVDAMALDIVDPVANQDEQRPLPNYEAAGFAQYAPGHGHPYYYFRDVTTPSPVAATVAESSLQLLERRNSQHQEATTCLNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-