Asol007893.1
Basic Information
- Insect
- Aulacorthum solani
- Gene Symbol
- -
- Assembly
- GCA_008528875.1
- Location
- PVMI01071539.1:2621-8768[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 3.1e-05 0.0061 17.9 1.0 1 23 107 129 107 129 0.96 2 22 0.00023 0.046 15.2 4.9 2 23 139 160 138 161 0.95 3 22 0.00092 0.18 13.3 3.1 1 23 198 220 198 220 0.99 4 22 0.3 59 5.4 6.2 1 19 252 270 252 272 0.91 5 22 0.021 4.1 9.0 0.2 2 20 295 313 294 315 0.93 6 22 0.0029 0.56 11.8 1.6 1 23 320 342 320 342 0.91 7 22 0.48 95 4.8 2.2 1 23 832 854 828 854 0.88 8 22 0.00019 0.037 15.5 1.6 1 23 924 946 924 946 0.96 9 22 2.1 4.1e+02 2.8 3.6 1 23 952 974 952 974 0.92 10 22 0.0086 1.7 10.3 7.4 3 23 1031 1052 1030 1053 0.95 11 22 0.00084 0.16 13.4 1.9 3 23 1109 1129 1107 1129 0.93 12 22 1.3 2.6e+02 3.4 5.5 1 23 1134 1156 1134 1156 0.92 13 22 2.2e-05 0.0044 18.4 0.6 1 23 1212 1234 1212 1234 0.98 14 22 0.0038 0.74 11.4 1.2 1 23 1240 1262 1240 1262 0.98 15 22 0.0051 1 11.0 1.3 2 21 1298 1317 1297 1318 0.94 16 22 0.00033 0.065 14.7 0.8 1 23 1348 1371 1348 1371 0.95 17 22 3.2e-05 0.0063 17.9 0.2 2 23 1416 1438 1415 1438 0.96 18 22 0.1 20 6.9 3.5 2 23 1446 1468 1445 1468 0.96 19 22 0.0051 1 11.0 0.9 1 23 1500 1522 1500 1522 0.96 20 22 0.00029 0.056 14.9 0.2 1 23 1527 1550 1527 1550 0.95 21 22 0.00015 0.03 15.8 1.3 2 23 1582 1603 1581 1603 0.97 22 22 3.2e-05 0.0063 17.9 3.0 1 22 1609 1630 1609 1630 0.97
Sequence Information
- Coding Sequence
- atgactcCAACGAAAGACTACATTAAAGTTGAAGTCACTGGCGATTCTGATGCTGTTACCAGtgaaTTATATGTTGAAAACACTATTGAAAATCCTGCATGGTATACAGTTGAAGATAACCATGTGTCTTTAGTATCTGAAAATGTTGAGAAAGTTATAAAGCTTGAAACTGATATGTTAGATGATTGCATGTGGGAAAGTAGAATCGAAATCACCAAAGATGTTTCAAACCAAAATAACTTGAAGTTACCCTTGGAATGTCAGGATGCTgcggataataatatttacttaaatcatAGAAATACAAgtgataaaatgtttcattgtAATGTTTGTGGAAAAAGCTTTgctttaaattatcttttaaaaaatcatttggcTGAACACAAAAGACAAGTAAATCagaaaactaataaatgtaaattttgtgGAAAAcagtttaagttaaaatttggttTGAATAGACACATTCAAAAACATCACAATCACATGTTTAGATCTAAGTCAACTAAGCACAAAAATAGCCATGAAAAGGATCAAACTGACTTAGATACTATTCCTAGCAGTGTCTGGAAAAGTAAAgcaaatgaatttaaatgcaACATTTGTTTCCAAAAATGCTACAGTGAAAAGAATTTGGTCGTACATATGGAAACCCATGACAATTCTCAAACACAATGTAATTATTGCTTACATTATGTTTCAGTTACTGAATTGAATAACCATTtggaaaatatacataatgaacatttatttaaatgtcataagtgtaatcaacaatttaaaaaaaaacgatatttaaattgtcatttaattttttgtttaagaagTTCTCATaccaaattgaataaaatttgtgGTAAATTCAGGGCTAATGAAAAAACTTGCTCTGCTTGTGGaatcacatttaataattctttatcATTGACAAATCATACGACTATTGGTTGTAAGCATTACACTTGTAAATATTGtggaaaattttttaataaaagaaatatttggcTAAAACATATGGATGCTCACAAAGAACTTCAACAATGTGCACTGTTAGAAGGAAGTACTGATGAAACATCTACAATAAGAGAACATAATCAAACTCAAGTTGTAGatgattcttttttttctattaacgGAAGAGAATTCCTTTCCAGAAATAGTTCGGTTCACACTAGTTTAGTGAACAGGAGTTCAACAGTTGTATCAACTGCTCCACACACCTATATTCCGAGCAATGACGTTAATTCAAGTTCAGAACAAACTGAAATCTTATCAAATAGTTTGGAAAGAAATAATTCAGATCAAATAGGTTTAGTAAGCAGAAATTCAACAATTGTATCTACTGCTCCTATGGCTCCATCGCCCTTAATGTCGGTGTTGAATGTAGATCCTCCACCCTTATCAAATACTATGGAAAGCAATATTTTAGATCAAACAGGGTTAGGAAGCAGCAATTCCACAATTGAATCGACTCCTCCTGTGAATGCATGGCCGTTAATGCTGCCTTcaagtaatattttgacaattgGTGACAGTGTGGCAGGCAATTTAGTGGAAAGCGAATTTTTTCCAACGCCCGTTCCATTTATTGTAGTTTTCAACaaacttttgaatttaaagCAAGAAAGATTCTATCATGAAACGGTCAGAGAACATTTTCAACgccaattaaatttacaacaatcTCAAATAAACACAGAGCAACCAGCTGCATTAAATACTccatataattcaataacaaatGGCCTTCGCGATCTTAtagattttagaaatttaatgaACTCGAGTACAGCTATTATGGAAACAAATAGTTCAAATCCAACTAATTTAGAAAACAGAAATGAATCAATGGTAGCGGCTACTGTAATCGActcattgataaaaattaagcaaGAAAATGACTTGTCTGCCAATGTCAGAGAAAGGAACAGTTCAGATCAAGTGGATTCAGATGGCAGTGAATCGATTGTTTCGGCTGCTTCACATAATCCAATAGCAAACAATTGCCCAGTCCTAAAAATAAAGCAAGAAAAAAACGTGTGTACAGATGCCAGGGAAAGGAATAGTTCAGAACAAGTGGATTCAGTGAACAGTAATGAATCAATTGTATCAGCTGCTTCGCATAACTCAATGGCAAACAATTGCCAGGTCCTGAAAATAAAGCAAGAAAAAAACTTGTGTACAAATGCCAGAGAAAGGCACAGTTTAGATCAAGTTGATCCAGTGAACAACAATGAATCAACTTTGGCAAACAAACTTCAAGATTTAATGGTGAAACAAAaccctaataatattgtatctacAGTTAGAGAAACGCCTTATttctgtattaataaaaaattacctaatattgaaaatggaTCTTGCAACAATGATTTTGACCAGACATCacaaaacaatgttatatttatatgtagaatttgtaaaaattctcCATCTACAGATATACATTCATTCGCATTACACATGAGTGATCACAGTGAGTGTAATATGCATGAATGTATTgtgtgtgataaaatatttaactctgTAGTTCTTTGGACAGAGCATATGACCCATCATCAACAGCAAATAGATTTAGATTTGTCAACAGTTCAGTTTAATCCTCTAGAGActgaatttaatacattagaaGACCCTATTAATTCTGAAAACATGGAACCTCAAGTTTGTACAaacttaagaaataaaaaattcaagaaatcTTTATTAAATGATTCACATTCAGATATAACAAGGTTAAATAGTgccgaaaaaattaaataccaataTGACTGTAGTACGTGTAAAGAAATGTTTCCTTCCAAGAGCGCATTACAAGTTCATCAAACTCATCATAATAAAACACTATCATTTTCCTGtaggtattgttataaaatattttccggAAAGGGTCCATGTACAAATCATGAAAAATCtcacattttgaaaacaacgAACCTGGACAAACAGgtgttacaaaataaacttgaaCCAATTTTAATCCAAAACAACAtcaatgttgaaaataataacactgaTTCTGAGacaatgtcaataaaatgtataaaaaaaaacaaatcatcatcaattaaaaaacaaacaaatttctgtaatatatgtaataggaAATTTACAAAGCGctgttattttacaaaacatatgATAATAAAGCATCATATAAATCCAAACACACCAATACAACTTCCATCAATTGATTGTAACAAATCAATCAGTCTGTCTGAAAACGTTGAGTTAACAAATGAAtacgaaaacaaattatcagttccagtaaataacaaaaataaccaTGTCAATAAAACCAATAAGAAGAAATCAACAGTTTGCATATATTGCAACAAACATTTTGCGCATCTTGGTGCCTTAACCAATCACATGCGTGCTCATTGTTATAAAccttataaatgtcaatattgtTACATGCAGTTTAGTAGGAAACGTACTTGTATTATGCACGAGAAAGAAcatgtattgaataattttaaaagcgcacctgttcaaaacaaaaacaatatagttaATGAAGTTAATGATGAACCACAAATTGAACATTGTAATGATTTTGAGTTTATTACTAGTCCAGTTAATGATAATTCAAGAGGTACAAATGTTATGGGCATAGAACAGTTATGGTTTTCCTGTGATGTGTGTGAGGAAAAATTCTCTACTCCATTCCAATTGAATGTTCACCGAAATTCACATTCCGGAATTGTACCATTTGTATGTAAGATTTGTAATAGATCTTTTCAGTTGAAATTTCGATGGAATtggcatttaaaaattcactaCATTCAACACAATGCAAATTCAAAAAGTAAGCAGAATACtaataatctaaaatcaaaCATTAGTAAACTAAAGGCTGAATCAAAACATCATACGGATAAAATGAAATGTCGATATtgcaaaaaacaatataactcTATATCTCAGTGGAAGAAACATATGACAATGAGCAAAGAATGTCGTCGCCATTGTAAAAGTAACCTTCCAGAGTTTACATCAAATATAACTACAAAGAATTCTTTCAAAACTGGTCGATATAGATGTAATATATGTGAAAAAACATATAGTACCATTTCCAATCGAAAtgtacatgaaaaaaatgttcataatgtGGTGTTAGATACAACCGATTTGAATACTTATGATAGTACCGGTTTACAAAAAGACAAATCAATGGACATAGTTCAACGAAAACTTGCAATTAAGAAACAAAATAGAAGTAATCACATCAATAACACTAAATGTGGGTTATGTGGTAAAATATACAGTAGTGTAGGTAATTTAACTCGCCACATATCCAAAATTCACTCTCAAACTTGTAAACCTATAACCTGTAGTGTTTGTGAAAGTACATTTGAACACAAATTTTCTTACcaagaacattttaaaactaaacatagacaattatttaaacattatgtgGAAACAAACTCAACAAATGAAAGAACCGGCCAGCAAATAATgtcagtaaataaaataaatactatgaaattcttttgcaaaatatgtaaaataaagttttttgacAATATCGCATTACAAGAACATTCAAAGATACatactttaaatatgtatacgtgTAAAGACTGTGGTCAGCAGTTTGAGACTAATATTACTTTAGGTAATcatattttggaaaatcaCTATGCCAATATTTCTACATCTAGTATAAATGAACATATTGAGAATCATGAGAGCCAAAATGCTTCTCTAGAATCAATTGATAATAGACGTATTCAgtgtaaaatttgtttgaaagtCTTAAAAACCAGAAAATATTTGAGATTACACATGCGTTTACACTCGGGTGTCAAaccatttaaatgtaataagtgTAACCAGGCTTTCAGATTTAATTCAAACTTCAGAGTCCATCAGAGGAAAAATTCTTGTTGTATcccttaa
- Protein Sequence
- MTPTKDYIKVEVTGDSDAVTSELYVENTIENPAWYTVEDNHVSLVSENVEKVIKLETDMLDDCMWESRIEITKDVSNQNNLKLPLECQDAADNNIYLNHRNTSDKMFHCNVCGKSFALNYLLKNHLAEHKRQVNQKTNKCKFCGKQFKLKFGLNRHIQKHHNHMFRSKSTKHKNSHEKDQTDLDTIPSSVWKSKANEFKCNICFQKCYSEKNLVVHMETHDNSQTQCNYCLHYVSVTELNNHLENIHNEHLFKCHKCNQQFKKKRYLNCHLIFCLRSSHTKLNKICGKFRANEKTCSACGITFNNSLSLTNHTTIGCKHYTCKYCGKFFNKRNIWLKHMDAHKELQQCALLEGSTDETSTIREHNQTQVVDDSFFSINGREFLSRNSSVHTSLVNRSSTVVSTAPHTYIPSNDVNSSSEQTEILSNSLERNNSDQIGLVSRNSTIVSTAPMAPSPLMSVLNVDPPPLSNTMESNILDQTGLGSSNSTIESTPPVNAWPLMLPSSNILTIGDSVAGNLVESEFFPTPVPFIVVFNKLLNLKQERFYHETVREHFQRQLNLQQSQINTEQPAALNTPYNSITNGLRDLIDFRNLMNSSTAIMETNSSNPTNLENRNESMVAATVIDSLIKIKQENDLSANVRERNSSDQVDSDGSESIVSAASHNPIANNCPVLKIKQEKNVCTDARERNSSEQVDSVNSNESIVSAASHNSMANNCQVLKIKQEKNLCTNARERHSLDQVDPVNNNESTLANKLQDLMVKQNPNNIVSTVRETPYFCINKKLPNIENGSCNNDFDQTSQNNVIFICRICKNSPSTDIHSFALHMSDHSECNMHECIVCDKIFNSVVLWTEHMTHHQQQIDLDLSTVQFNPLETEFNTLEDPINSENMEPQVCTNLRNKKFKKSLLNDSHSDITRLNSAEKIKYQYDCSTCKEMFPSKSALQVHQTHHNKTLSFSCRYCYKIFSGKGPCTNHEKSHILKTTNLDKQVLQNKLEPILIQNNINVENNNTDSETMSIKCIKKNKSSSIKKQTNFCNICNRKFTKRCYFTKHMIIKHHINPNTPIQLPSIDCNKSISLSENVELTNEYENKLSVPVNNKNNHVNKTNKKKSTVCIYCNKHFAHLGALTNHMRAHCYKPYKCQYCYMQFSRKRTCIMHEKEHVLNNFKSAPVQNKNNIVNEVNDEPQIEHCNDFEFITSPVNDNSRGTNVMGIEQLWFSCDVCEEKFSTPFQLNVHRNSHSGIVPFVCKICNRSFQLKFRWNWHLKIHYIQHNANSKSKQNTNNLKSNISKLKAESKHHTDKMKCRYCKKQYNSISQWKKHMTMSKECRRHCKSNLPEFTSNITTKNSFKTGRYRCNICEKTYSTISNRNVHEKNVHNVVLDTTDLNTYDSTGLQKDKSMDIVQRKLAIKKQNRSNHINNTKCGLCGKIYSSVGNLTRHISKIHSQTCKPITCSVCESTFEHKFSYQEHFKTKHRQLFKHYVETNSTNERTGQQIMSVNKINTMKFFCKICKIKFFDNIALQEHSKIHTLNMYTCKDCGQQFETNITLGNHILENHYANISTSSINEHIENHESQNASLESIDNRRIQCKICLKVLKTRKYLRLHMRLHSGVKPFKCNKCNQAFRFNSNFRVHQRKNSCCIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -