Asol027766.1
Basic Information
- Insect
- Aulacorthum solani
- Gene Symbol
- bab2
- Assembly
- GCA_008528875.1
- Location
- PVMI01065282.1:1413-5751[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-18 2.6e-14 53.7 0.0 3 44 253 295 251 296 0.95
Sequence Information
- Coding Sequence
- ATGGCAGATCAGAGGTTCTGTTTGCGGTGGAACAACCACCAGCCTAACCTGGTCAACGTCATGACGGGCCTGTTGAACAGTGAGATGTTCGTGGACGCCACCATCGCCGCCGAAGGCCGGAAAATACAAGTGCACAAAGTCGTGTTGTCCGCATGCAGCAGCTATTTTCAAATGCTTTTCAATGAAACACCTTGTCAACATCCAATAATCATCATCAAAGACATGtcttataatcatttaaaaacattaattgagTTTATGTACTATGGTGAAGTTAACATCTCTCAAGATCAActtccaattattttaaaagCAGCTGAAAGCTTACAAATAAAAGGCTTGACAGAGAAAACTATGTTTCCATTTGCTACTACACGACACGCAGAAACTGAATATAGTTTGTTGTCACCCTCGgcgaaacgaaaaaaaatgcatcttATGAAAACATCCAGTGATAAATCCGAACACAACAGTTCTATTGAAGATATATCAGTAACCGAACAAGATAATATGTCAACTagaTCTCAACCTACATCACAAGGACAAGATACATCAAAACCTATTAGTAGTGTAAGCAAACAATCGTCTACAGATAATCATACAACAATTGTTCACCACAAACCTGAAGGTTGGTCGTTTTTGGAGCAGCTCTCTGATTGCCCGCCTCACAGTGTCTACGCCATACCTAAAGCCAAAGCAGTATCCAAACCAGAGAATAAAGTTCGTAAAAAACGAGAACCCGGTATACGGGAGAGTGATCGTTTTAAAGAAGCTCTTGAGGCTGTACGTGTGGGCCGTATGGGATTTTGTCGTGCTGCTCAAGAGTATGGGATAAATAACCGTACCTTGTGGCTCGAGTACAAAAAGAAAGGTTATCCCGTTCATCGAAAAGGTCAGTCTTCCTCGTCTATTCCAGTACCCTCGCCAGCATCATCAATCAATGGTCAATCATCCGAGCAAGTGTATCAAGCGCCACTATATGAACCTTCAACATCTCAAACTTCAGCAGTTGATCATCCTGCTTATGTTTCACAAATGTATTCGCAGCCTCTGACAGTGATTAACCCATGCTATTATTCTTCACCCGCaccttcaatattttcaacagataaccatacataa
- Protein Sequence
- MADQRFCLRWNNHQPNLVNVMTGLLNSEMFVDATIAAEGRKIQVHKVVLSACSSYFQMLFNETPCQHPIIIIKDMSYNHLKTLIEFMYYGEVNISQDQLPIILKAAESLQIKGLTEKTMFPFATTRHAETEYSLLSPSAKRKKMHLMKTSSDKSEHNSSIEDISVTEQDNMSTRSQPTSQGQDTSKPISSVSKQSSTDNHTTIVHHKPEGWSFLEQLSDCPPHSVYAIPKAKAVSKPENKVRKKREPGIRESDRFKEALEAVRVGRMGFCRAAQEYGINNRTLWLEYKKKGYPVHRKGQSSSSIPVPSPASSINGQSSEQVYQAPLYEPSTSQTSAVDHPAYVSQMYSQPLTVINPCYYSSPAPSIFSTDNHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463266;
- 90% Identity
- iTF_01432936;
- 80% Identity
- iTF_00184704;