Asol020544.1
Basic Information
- Insect
- Aulacorthum solani
- Gene Symbol
- retn
- Assembly
- GCA_008528875.1
- Location
- PVMI01027744.1:1-1755[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-20 6.7e-17 62.7 0.0 18 89 1 70 1 70 0.95 2 2 0.96 3.5e+03 -0.5 0.1 69 84 152 170 131 173 0.49
Sequence Information
- Coding Sequence
- ACTCCAATTAGTCGTCTACCCATCATGGCCAAACGTGTGTTGGATTTGTACACCTTGTATAAGTTGGTCGTCCAGAGAGGAGGTATCGTTGCGGTCATCACCAAGAAGTTGTGGCAAGAGATCATCCGAGGCCTGGGACTACCTCCTTCGATAACGAGTGCCGCGTTTACATTACGCACACAATACGTCAAATACTTGTACGCTTACGAGTCGCGGATGAACCAGTTCAGTACGTTGGACGAGCTGAATATGGCGATAGCGGGCAACCGGCGCGAGGGCCGCCGGAACAAGTCGCTCATGTATTCGGACATGCCACCGCCACCACCCGGCCACCCTCACCACCATCACCACAGCCATCACCAACAAGTGCACGGTGGCCACCCGCACTCAATGATGGGTGGGGGTGCCCCGCCGCAGACGTCGTcgcaacaacagcaacagcagcaacagcagcatcagcaacagcaacagccgCCGTCGTCCCTTAACCATCACCACTACGCCAACGTGCTGGCCGCCGAGGATCGGTTTCGGCACCTGGCCGCCGCCATCATCGACAACCACCATCACGC
- Protein Sequence
- TPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESRMNQFSTLDELNMAIAGNRREGRRNKSLMYSDMPPPPPGHPHHHHHSHHQQVHGGHPHSMMGGGAPPQTSSQQQQQQQQQHQQQQQPPSSLNHHHYANVLAAEDRFRHLAAAIIDNHHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -