Basic Information

Gene Symbol
ARID4B
Assembly
GCA_008528875.1
Location
PVMI01068842.1:4869-16070[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-26 2e-22 80.4 0.4 1 89 330 413 330 413 0.94

Sequence Information

Coding Sequence
ATGAACGAGGTCTACTACATGTACCTACTTGTTATTCCATTAACACTTAAATGGAAGTCAGTATGTAGTATGGTCgtgaATTTGGATGAACCCCCTTTTCTTGCTGTTGGAACAGAAGTAAGTGCCAAGTACAAAGGGGCATTTTGTGAAgcaaaaatcagaaaaatatcaaaaactgtaaaatgCAAAGTTCAATATTCTAATGGGATATCAACATTTGTCACAGATGATGCAGTGAAAGGACAATTAAAGGTGGGAGCTAGtgttgatataaaatgtagtgATAAAAAAGAATTAGTTCGAgcaacaattcaaaaaattcaagatTGTAGTCAATACACTGTTGTATTTGATGATGGAGATATTACATGTTTGAAGAGAACAGCATTATGTTTGAAAAGTGGAAGACACTTTGCTGCTAGTGCTACTCTTGATCAACTTCCTCTAACACACCCTGAACATATTGGTGTTACTCCAGTAAGAACCACTATAGTACAAGGTCGTAGAAGccgaaaacataaaaaaagttttggGGAGAGTGGAGAAGAAGAAGCTTCAGCAATGGAGGAAAAAGATATAGGAAAAGTAGTTTGTGTAGAAGCTAATGATAAAAAGAAAGTAAGGGACAATTGGTTTCCTGGTTTGATAGTTGCACCCACTTCACAATCCTCAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACAGTaccaaaaaaagaaattaatgaatttacaAAAGAAATTGGCGCCAGAGTGGAAAATCCTACACTCAAAACTgccgTTGAAAAAGCACTATTCTTCCTTGACAAAGATGAACTCCCACCACACTGGGATAGAGATTTGTTATTTGGTGttgataaaatttgtattgctACAGATAGTGAAGCATTTGATAGtgataattCTGATGAAGAATCTATTGAAGAAAAGGACCATTTTGTCGcacagttatttaaatttatggatGACCGAGGAACTCCGCTTAATCAAGGTCCAGTGATCAATGAAAAAGatgttgatttatataaattatttaaggTCGTCAATAATTGTGGTgggtataataaagtaaataaaggTAAACTATGGAAATTTGTTGCAAATAAAGCTGGACATGAACAACagtcatttttttctgttaaacATTGCTATCAacaATATTTACATAGTTTTGAAGATTTTTATCGAAAACTCGGATGTACTATGTTGAGTCATCCTAGGGGAGTAAGATCACGCAGTAGATTTAGCCGCAGCATTATTAGGGATGTTGATAAAGCTTTGCCTAGCACCTCATCAGCAACTGATAAAAACAAGTCtgcaaaaaatgaattgaatgataaaaaaaataaggagtctgctgtaactaaaaaaacagCCAAAGCTATTAAAGCCGAAGAAAAACTTCTAAAGAACAATGAAGAAACTTCAAAGAAaggcgataaaaaaaaagaagatattGCTAATAGTACTCCACGTAATAAACAATCAGTGAAATTTGGTTCAGAAATAACAGAAACAAAAGATCCAGTTAGAAattctaaaactaaaaaagaaatgaaagaaattttaaaaaaagagatAAAAAAAGAGATAGATTCTGATACAGTAGAGGATGACCAAATAATTGAAGATAAAAAagtagaaaagaaaaaatataccagaaatttatttggaaaatCAGTGAgaaaaactactaaaaaagaaaaagttgtaaaagtaaaaactgtaaatacGGGGTTACCAGGTATGAGAAAAATGAGAGCCATCAAAgatcaaattaaaacttttgttaAAGAAATGACTCCATTCAAAAAGTCTAAAAGAGGAGTTTCTAATACCCAGCAAGatgctttaaataaattaaaaacggaCGAAGAAGTaccaaaactaaCACGATCGAAAACCAAAGAAGATTTACCAACTAAATCAAGGAGAGTATCAGTATTAAGTGATCTTGCTGACAGTGCTTCTGTTGTACAACTGACACAACCTGGACTTCTTGTAgaaaatctaattaaaattaaaaaggaaGATGTGACTGAAAAGAAGAAAACCGTAAGAAAGAAAAAGGATGATAAAGAGGAGAAAACCTCTGCAAACGATATAGTTTCTGTACCTGTtaatattgaaaatgtaccaTTTGACAAAGATTCACCAGTGGTCGTTGGAGATAATTTAGTAGTATACTATGGAGATAAACAAGCAACAACTTATGATGCAAAAGTTATTAATGTGTGTGATATTGAAGgagtaatgaaatattacgTACATTATAAAGGATGGAATTCACGTTATGATGAATGGATAGATGTAACACGTATTGCTTATAAAACTAAGGATCCGGAACCAGGACCTGAAGTAGATAATGATGCGGATTCTTCAAAAAGTAGTCCTGTAgaacAAAAAAATGTGGATCAAAAAAAAGTACCGACAACAAGTAGTAGAACCAGAAGATCAGTTACTCCACTCAcatcaaattcaaatataaaaaaatcaccattTAGCAGTGCTCGACCTACTAGAACATGTACTTTGACCGATCGCCCATTATTCAATATTgataattccGATTCAGAAGGAGAATACACAGTAAGTGTTGGATCATCTAAACAATACAGTAAGAAAAAGGTAATAAAATCCGAAcctggtattataataaaaactgaaccaTTGGATaccgaaaatcaaaaaaagacGCCATATCCAAAGACTTATCCTAGTAAAGAAGTACTTATGCAGCGAAGTGCACCTAAAAAACCAAAGTCATGTGTGTTGAAAGTTCATAGCAATAAACCTGAAGTAGTTGAGGCTTGTGAACAAGTTACTCTTAAACCGccgtttgattttaattttgtgatgCCTCCACCAAGTGATGGTATAAAACCAAAtgcaaataatgaaaatgtagaATCACAGAATGAATGTAAAATAGACGACAGTATTCTAACTGAACCAAAAATTGCTCCTAATCATTATTTGTCACCTAAAGAAAAATCTGAAAGAAATGATCTAGAACTTATTTCTGAATcttcaaaatgtacaaatgaTGAAGTCAGAATTAAATCCGAGCCATTGACAATCCAAACGAAGTCAGAAATATCAAGTATCATATATTACTCGTCATCCTCTGAAGATGAagaacaaaatcaatttaaaaaagtaactgATGTCATATCTTCCTCATTAGATGATAAATCTGATGAATCTAAAATTTCTGGTACCGATTTTGATCTTAACAAAATAAGATCAGAAATGAAAGGACTAATGCCAACTTCagcaaatagtaataatgatattattcaaaatacagATTCATTCGTATCGGACCAACaaatagaaatagaaattCCCAAAATCAATGAACCAGTTAAAGATgatgtttatgaatttaaagaaTCTGAATCATGCAATTTTGATACTAATCCTTCTGTCACTGAAGAAAAGTTTTGTAGATCTATTAGACATGATtcaccaaaattatttaacttagaGAAACCTGATGAACTACCAAGAGTCATTGATTCTCCATCACAAGAGGTAGTAGTTGAACAAAATGGGTCCTTGGTACCATGTGTGCCTAACAGCAGTAGCATTTATTTACttgataataatgttgaaataaaagttaatgaaaatttgaatattacaaataaaatcgaaaatccAATTATGAGAAATCAATCTGACAATGAGTCTAATGAATCCCAAAACTTGATGGTAAGTGATGTTACAGTAGacactcaaaatataaaagaaattgaacattttcagGATGAAGTTAATGTTTCTGACTTAAAAGATGAAGTTTTGGATTTGTGTATGAAACCACCTGAATCGCCACCtaccaacatttttagtatGCCAGAGCAAAATGAACTTAATGATATGATTATTGAAgaagatgatgatgatgatgaagaTGATGATGAATCAAAATTGGTAATAgctgaaaatgataaaatagaaaCTGATTATCAAATGGATTCTGATCTTGTGGTTATTAGCCAAGAGCATAATTCTTCCAATGAACAAATTGACAACATCATAGAAGCACAATCCCTGCCACCACTTCCACCAAGTATACATACTAATATTGAATTGGAGTGTAAAAGTTCATCTCAAGTAAAAAGAGCTATTAGTATACCAAAAGATACAGATGATGAAAGTACTACATCCTGTAATGAGAGCATTCAAAATGCTCTTATTCAAAGTTTCCAAATGTATTCACATTTTGAAAACCACTCGAGTCAAAATAGACTTTATATggataatattgatgaaaatacaaaatctggttttgaatttgattcaaattcaaaatcacCTACTATTGGAGATAGGGAAATTGTTGAATCTGGATCCAAACTACCCATTAACGAATCTTCAATTAATGATAAGcctaaaaaatgtgattttaaaatcaaaaatgttaaaaataagtacgAGAAAGACAAAACTATTGTATTGCCAGAATTACAATGTAGAGAAGAAATAGTAGATGAAGATACCCTCAATAATGCTTTAGCTATAGAGTACAGCCGTAAATCTGCAGAATATGACATTCATAAGCCTAGTACTAGTAAAGGGTTCTTTGATTCAATACATCAACCAGGTACAAGCAAAGATAGTTTCTACGAAACTAACACTAGCAGTaactcaaaaaaaagtttctttgAAACTAGTCAagcagtaaaaaatgtttttgatacaAACGTCCCTGGAAAAAGTAGTTTATTTGATCCCAATATTCCTAGTTGCAGTAGCAAAGATTTTTATGATCACAATATGCCAAGTACTAGCAAAAGCTTTTATGAAAACTCTTTGCCCAGTACTagcaaaagtttttataatccCGAATCTGATGTAAATAGTGTTCTATTTTGTGAAGAAACGATACCAGGTAGTCCAACTGGTATGTCAGAAGAACAATATGATcaagaggaaaaaaaaaaagctattCAAGCACTCTATGAAGAAAGAGAGGCTGCTTCAGCTATGTATGCTATGAATCAATCTTTTCGTAGACCGAAGATTACATTGATGGGTGCCACTGAAGAAGAAATGGAagaatattctaatattcttcaaaagtaa
Protein Sequence
MNEVYYMYLLVIPLTLKWKSVCSMVVNLDEPPFLAVGTEVSAKYKGAFCEAKIRKISKTVKCKVQYSNGISTFVTDDAVKGQLKVGASVDIKCSDKKELVRATIQKIQDCSQYTVVFDDGDITCLKRTALCLKSGRHFAASATLDQLPLTHPEHIGVTPVRTTIVQGRRSRKHKKSFGESGEEEASAMEEKDIGKVVCVEANDKKKVRDNWFPGLIVAPTSQSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTVPKKEINEFTKEIGARVENPTLKTAVEKALFFLDKDELPPHWDRDLLFGVDKICIATDSEAFDSDNSDEESIEEKDHFVAQLFKFMDDRGTPLNQGPVINEKDVDLYKLFKVVNNCGGYNKVNKGKLWKFVANKAGHEQQSFFSVKHCYQQYLHSFEDFYRKLGCTMLSHPRGVRSRSRFSRSIIRDVDKALPSTSSATDKNKSAKNELNDKKNKESAVTKKTAKAIKAEEKLLKNNEETSKKGDKKKEDIANSTPRNKQSVKFGSEITETKDPVRNSKTKKEMKEILKKEIKKEIDSDTVEDDQIIEDKKVEKKKYTRNLFGKSVRKTTKKEKVVKVKTVNTGLPGMRKMRAIKDQIKTFVKEMTPFKKSKRGVSNTQQDALNKLKTDEEVPKLTRSKTKEDLPTKSRRVSVLSDLADSASVVQLTQPGLLVENLIKIKKEDVTEKKKTVRKKKDDKEEKTSANDIVSVPVNIENVPFDKDSPVVVGDNLVVYYGDKQATTYDAKVINVCDIEGVMKYYVHYKGWNSRYDEWIDVTRIAYKTKDPEPGPEVDNDADSSKSSPVEQKNVDQKKVPTTSSRTRRSVTPLTSNSNIKKSPFSSARPTRTCTLTDRPLFNIDNSDSEGEYTVSVGSSKQYSKKKVIKSEPGIIIKTEPLDTENQKKTPYPKTYPSKEVLMQRSAPKKPKSCVLKVHSNKPEVVEACEQVTLKPPFDFNFVMPPPSDGIKPNANNENVESQNECKIDDSILTEPKIAPNHYLSPKEKSERNDLELISESSKCTNDEVRIKSEPLTIQTKSEISSIIYYSSSSEDEEQNQFKKVTDVISSSLDDKSDESKISGTDFDLNKIRSEMKGLMPTSANSNNDIIQNTDSFVSDQQIEIEIPKINEPVKDDVYEFKESESCNFDTNPSVTEEKFCRSIRHDSPKLFNLEKPDELPRVIDSPSQEVVVEQNGSLVPCVPNSSSIYLLDNNVEIKVNENLNITNKIENPIMRNQSDNESNESQNLMVSDVTVDTQNIKEIEHFQDEVNVSDLKDEVLDLCMKPPESPPTNIFSMPEQNELNDMIIEEDDDDDEDDDESKLVIAENDKIETDYQMDSDLVVISQEHNSSNEQIDNIIEAQSLPPLPPSIHTNIELECKSSSQVKRAISIPKDTDDESTTSCNESIQNALIQSFQMYSHFENHSSQNRLYMDNIDENTKSGFEFDSNSKSPTIGDREIVESGSKLPINESSINDKPKKCDFKIKNVKNKYEKDKTIVLPELQCREEIVDEDTLNNALAIEYSRKSAEYDIHKPSTSKGFFDSIHQPGTSKDSFYETNTSSNSKKSFFETSQAVKNVFDTNVPGKSSLFDPNIPSCSSKDFYDHNMPSTSKSFYENSLPSTSKSFYNPESDVNSVLFCEETIPGSPTGMSEEQYDQEEKKKAIQALYEEREAASAMYAMNQSFRRPKITLMGATEEEMEEYSNILQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01304638;
90% Identity
iTF_01032662;
80% Identity
-