Basic Information

Insect: Augochlora pura
Gene Symbol: -
Assembly: GCA_028453695.1
Location: CM052109.1:11819760-11823140[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0014 0.099 13.0 2.1 1 23 103 126 103 126 0.94

2 13 0.0096 0.68 10.4 4.6 2 23 252 274 252 274 0.91

3 13 0.00035 0.025 14.9 1.9 3 23 319 340 318 340 0.96

4 13 5.4 3.8e+02 1.7 7.6 3 23 425 446 424 446 0.95

5 13 0.066 4.7 7.7 2.2 1 23 495 518 495 518 0.94

6 13 0.0071 0.5 10.8 2.1 3 23 567 588 565 588 0.94

7 13 0.00012 0.0086 16.3 0.1 3 23 612 633 611 633 0.93

8 13 0.007 0.5 10.8 3.6 2 23 675 697 674 697 0.96

9 13 0.095 6.7 7.2 4.2 3 23 712 733 710 733 0.92

10 13 9e-05 0.0064 16.7 0.1 2 23 777 799 777 799 0.94

11 13 0.044 3.1 8.3 1.6 1 23 876 898 876 898 0.98

12 13 0.00046 0.033 14.5 0.8 2 23 912 934 911 934 0.96

13 13 0.0062 0.44 10.9 0.8 1 23 1008 1031 1008 1031 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0014	0.099	13.0	2.1	1	23	103	126	103	126	0.94
2	13	0.0096	0.68	10.4	4.6	2	23	252	274	252	274	0.91
3	13	0.00035	0.025	14.9	1.9	3	23	319	340	318	340	0.96
4	13	5.4	3.8e+02	1.7	7.6	3	23	425	446	424	446	0.95
5	13	0.066	4.7	7.7	2.2	1	23	495	518	495	518	0.94
6	13	0.0071	0.5	10.8	2.1	3	23	567	588	565	588	0.94
7	13	0.00012	0.0086	16.3	0.1	3	23	612	633	611	633	0.93
8	13	0.007	0.5	10.8	3.6	2	23	675	697	674	697	0.96
9	13	0.095	6.7	7.2	4.2	3	23	712	733	710	733	0.92
10	13	9e-05	0.0064	16.7	0.1	2	23	777	799	777	799	0.94
11	13	0.044	3.1	8.3	1.6	1	23	876	898	876	898	0.98
12	13	0.00046	0.033	14.5	0.8	2	23	912	934	911	934	0.96
13	13	0.0062	0.44	10.9	0.8	1	23	1008	1031	1008	1031	0.98

Sequence Information

Coding Sequence: ATGTCCTCAACGATGGCGCATGAAACGACGATATCGGACTTGACGGAATTGGACAGCGACGGGTCGAGTTGCGGGGAGCGCGGCGACGCCAGGAAACGTCTCCGCTTCGACGTCGACTCGACGGGGCCGAAGAAGAGGCGGAAACAAACGACGCCCGTAAGATTCTCCTCGACGCAGGCGACCGGCGTGCAGGAGGAGTCGAACGAGGACGAAGAGGAGGACGAAGACAGCGAAGGTAAGCTGTCGACGCAGTCACCCATACCAAGCCAGTCGTCGACGCGCGGCGACGAGAACCTGAATAATGAGTTCCGCTGCCAGTATTGTAGTCAGTTTTTCGACAGCAAGGCTACGTTGCACGTGCACATTGACAACGAGCACGGTACCGCGGTTCGGCTAGCCGGTCCCAATCGAACCGGCTCGCCGAGCAACGTGGTCAAGGCGGAACCGCCGCAGCAACCGGACCAATCCGAGAACCCCGTGAACCTGCTCAGCGTAAAGAGCTTTGCGACCAATTGGCTAGGCGCGACAGGGCAACACGTGCAATCGCAGATGCAGCCGCAGAACGAGGAGCTGTGGCCGAGTCCAGTGAGCCAGTTATCCGCGTTACCGAATCATTTGCAAGCCCTTCAAGCGGGGTTCCCCGGCGCGTTGACACAATATCTACCCTTGCCCGCGTTCCCGCTAACCGATTCCAGCCACATCGTCCGCCCGCCGATGGGCCAAGCGCCGATGAGGATCTTCAACCCGGACGCGTACTGCGATCTGTGCAATAAAGAGTTCTGCAACAAGTATTTCCTCAAGACGCACAAAGCCAACAAGCACGGGATCTACGTCGACTCTCCCGGGCCTAGCACGGCGGACAACAACCTCGCCGGAAGCCTGTATCCAGGGAACTTTCCCAACAGCATGGTCAAGCTGGAGCCACCCGTGACCCCGCCCACGCCCAGCGTGGCCTGCGACGTTTGCCAGAAACGCTTCAAGAACGAGGACTCGATGCGCAAGCACAAGCAAAAGATGCACACCGAGCAGCCGGACCAGTCGCAAGACGCTCAGATCGTGTTCTCGCAGAACGAAGAGGACAGAGAGACCCCGAGGAACAGTCCCGGTGGCATGGAGACTCTTTTCAAACAAGAGTACGGAATGGAGCAGGAGGACGCGTCGTTCGTGCCGGCGCCCAGACACCTATCGCCTCAATCGATTCAGCAGGCAAGGGACGCCGGATTTAACGCCGATCGGTTGCGTCGTTTAGGGGTCATAAATCCGGAAGCGTTTTGCGAGATATGCTGTAAAGAGTACTGCAATAAGTATTTCCTGCGCACACATAAAATGAAAAGGCACGGCATCGTCGTTCAAGAGAACGAGAAGTCTCCGAGCAACCCGGGATCCGCGGCTACCTGGCATCAAGTGCAGACCAGCCCTTTGAACCTGATAGTGGCGGAGAGCGCGTGCAGCACGGAGTCGAATGAACGCGCGGGGGAGGATTACGAGTGCAAGACCTGCGACATACGGTTTCAGACGATCGGCTTGTACCAGGCTCATTGTCGGAAAATGCACGAGAGCGAGGAGCAGCAGTCGCCGAAACAGGAAAGCGACCTGGAGCTGCAGGATCAGCGCAACGACTTCATCTCCGAAGACCTTCAGAAGTTGCAGACTATGCTGTTGCAGCTGAACGGATTGAAGTCCGGCAAGAGCATGTGCTGCGCCGTGTGCGGCAAAGAGTGCGACAGCAGAGCTGCCTTGCACGTTCACATGGTGACGGAGCACGGCGCCATCAGCGAGGACTCTGGTTCCTCGCCGCAGGATAAATCACCGATGACCACAGTTTCCTCTTTCTGCAGCTTGTGCGGCAAAGACTACCCGAATCAGGACGCGCTCCGAAGGCACATCGCCGAAGACCATCAACCGGCAATTTCGACTTCCGTTCCCCACACGCCCACCACCACAGCAACGGTCACCAATTCCACACCGACCAGCCAGACGCCGACCGAAAAGAAAGTGATGTCGATGACGCCGACATCGAGCTACTGCGAAATCTGCAACAAGGAGCTCTGCAACAAGTATTTCATGAAGACGCACATGCAGAGGATGCACGGCATCGAGATCGAGAACGGAGCCCAGATCGGCGGAGTAATCTGCAACATCTGCAACAAAGAGCTATGCAGCAAATACTTCTTGCGTGTCCATAAACACAATACTCACGGGATCGTGGACGAGAACACGCCCAGCTCGACGAAGCAAGAGGCCCAAGACCAGGCGAACACGGACGATGCCTTGAAGCCGGAACAGCTCGGCGATCTCAGCCACAGATACTTTACCCACTTCACCGAAGTCTGTCCAATTTGCAACAGAAGGTTTCGCAGCATAAAGTGGCTGAAGGCTCATTTGATGGGCGACCACGGAAAGATGGGCATCGACAAGTGGCGCGAGATGGAACAGCAATGCCAAGCTACCAAATCCGGGAGCCGTGTATTAAATATCTCGAAGAACGCGCAGAACACGAATTTGAAGATACCAAATGGATTCGATATTCCGCAGCAGATCAAGTCGGCAGAGTACACCGGCCTGGGCAATCAAGTGCTGTCGAATTTGCTGGGATCATCCTCGGAGGACCAGCAGCTGAAAAGCTACCGTTGCTCTTATTGCAATTTCACGACGACCGTGTTGCCGTTCCTTTTCCTGCACGAGCGATCCCACGTGAACGCCCAGGAGAGCACCGAAGGCGAGAAGTCGCTGCAGTGTCCGATCTGCTCGCAGGGCTTTCATCAGCCCGAGATGCTGCATCAACACCTTCTCACGGCGCATCAGTTCCCCGCGCTCCTGTCTCACTTTCAACCGCCTATTCTCACCAACTTGGGCCTGGACATGGAGAAGCTGGCCGAGGTCAAGGAGAAGTTCGACCAGGAAACAAAGGACGAGCGCATCGGGAACAGTCCGCAAGTCACTGCCAATCAAACGATCCCCGATTCGATCAGGAGCCAACGACAGGAGGACACGGCGGTGCAGGTGACTCCGCAAGGTGTGTACAAGTGCGCCCAGTGCGGTTACGCGACGACCAATTTGAACAGGATCAAGAAACACGTGAGGAAAGATCACAAGGCGATCGGCGATCCCACGGATAGCGTGCTGGCCGAGCTGAGCAGGACGCTGAAGGACGTCGCGAACAGGCACAAGATGCCGGCCTGCTACGCGATGCCTCAGGACATGAACTCGAACCCGGACAAAACGATCATGCAGCCGTTTTTAATCGAGGAACAGGAGATTATGCAAACCGGCGACGAATCCGGTTCCGAGAAACGTTTCGCACCGGCCTTGGTCTATTTGCCGGTGAAATCGCGGATCAGCAACGCGCTGACCGCATCCTTCACCTTGAGCCCCGCTTGA
Protein Sequence: MSSTMAHETTISDLTELDSDGSSCGERGDARKRLRFDVDSTGPKKRRKQTTPVRFSSTQATGVQEESNEDEEEDEDSEGKLSTQSPIPSQSSTRGDENLNNEFRCQYCSQFFDSKATLHVHIDNEHGTAVRLAGPNRTGSPSNVVKAEPPQQPDQSENPVNLLSVKSFATNWLGATGQHVQSQMQPQNEELWPSPVSQLSALPNHLQALQAGFPGALTQYLPLPAFPLTDSSHIVRPPMGQAPMRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGPSTADNNLAGSLYPGNFPNSMVKLEPPVTPPTPSVACDVCQKRFKNEDSMRKHKQKMHTEQPDQSQDAQIVFSQNEEDRETPRNSPGGMETLFKQEYGMEQEDASFVPAPRHLSPQSIQQARDAGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIVVQENEKSPSNPGSAATWHQVQTSPLNLIVAESACSTESNERAGEDYECKTCDIRFQTIGLYQAHCRKMHESEEQQSPKQESDLELQDQRNDFISEDLQKLQTMLLQLNGLKSGKSMCCAVCGKECDSRAALHVHMVTEHGAISEDSGSSPQDKSPMTTVSSFCSLCGKDYPNQDALRRHIAEDHQPAISTSVPHTPTTTATVTNSTPTSQTPTEKKVMSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTPSSTKQEAQDQANTDDALKPEQLGDLSHRYFTHFTEVCPICNRRFRSIKWLKAHLMGDHGKMGIDKWREMEQQCQATKSGSRVLNISKNAQNTNLKIPNGFDIPQQIKSAEYTGLGNQVLSNLLGSSSEDQQLKSYRCSYCNFTTTVLPFLFLHERSHVNAQESTEGEKSLQCPICSQGFHQPEMLHQHLLTAHQFPALLSHFQPPILTNLGLDMEKLAEVKEKFDQETKDERIGNSPQVTANQTIPDSIRSQRQEDTAVQVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKAIGDPTDSVLAELSRTLKDVANRHKMPACYAMPQDMNSNPDKTIMQPFLIEEQEIMQTGDESGSEKRFAPALVYLPVKSRISNALTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00966247;
90% Identity: iTF_00024826;
80% Identity: -