Basic Information

Insect: Augochlora pura
Gene Symbol: -
Assembly: GCA_028453695.1
Location: CM052108.1:13989775-13992192[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 9.6e-07 6.8e-05 22.9 1.2 1 23 266 288 266 288 0.98

2 6 0.00026 0.018 15.3 0.3 1 23 294 316 294 316 0.99

3 6 0.00022 0.015 15.5 0.9 3 23 324 344 322 344 0.98

4 6 1.5e-08 1e-06 28.7 3.7 1 23 350 372 350 372 0.99

5 6 0.00042 0.03 14.6 6.4 1 23 383 405 383 405 0.96

6 6 3.9e-06 0.00028 21.0 1.2 1 23 410 432 410 432 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	9.6e-07	6.8e-05	22.9	1.2	1	23	266	288	266	288	0.98
2	6	0.00026	0.018	15.3	0.3	1	23	294	316	294	316	0.99
3	6	0.00022	0.015	15.5	0.9	3	23	324	344	322	344	0.98
4	6	1.5e-08	1e-06	28.7	3.7	1	23	350	372	350	372	0.99
5	6	0.00042	0.03	14.6	6.4	1	23	383	405	383	405	0.96
6	6	3.9e-06	0.00028	21.0	1.2	1	23	410	432	410	432	0.97

Sequence Information

Coding Sequence: ATGAAGACGTACAGCAGGAAAAAGGGCGATAGCCCTAGCAACGTAATTATTCACGTGAACGAGCTGTGCCGACTGTGCCTGGCAAAGGAGGAGGAGATGGTGCCGATTTATGACGACGAAACTATTCCCTTATCTCTTCGAATAATGGCTTGCGTTAATTTGGAGGTTTTCGAAGAAGATGGTCTCCCAAACATGATCTGTCATCCGTGCAAATATCAATTAGAAAAATCATACCAATTCAAGAAAAAGTGTGAAGCTGCCGATGCAAAGCTTCGAAAACATATGAAATTAATACAACAGTTAACAGGACAAGATGAAGAAGGAGAAAATCAAGACAACTATAGAGAAGAATTGAAAGATGGTTCTCATAGTGGAAAATCCAAACAAGTTAAACAATTGTTAGCTGATTTAGTATCAACTAAAGCTGAAAGTGGACAGGCAGATGGAGATCCAATCGAAGTTACAGAAGAAGAACTTGTTGGTGGCTACATTTTAGGAATGAATTCTGAAAATTTGGAAATGGAAGAACCTATGTCAGAAGATCCAGAAAATATTACATTGGTACCTGCTGAAGAACGTACTGCTAAAGCACGTTGTACAATATATACAAACCGTATTAAACAGGAACAGGAATCCGAAGATGAAGCAGAAGAAGTACAGAGAGCAATTGCAAATGCTGACCACAAAAATGTTTATATGATGGAAGTTACCAGTAACAATTCTGGCCAAGGAGAATCAATGAAGTTGCAACCCATTTCAGATACCATAGTTGAAGCCAGTGAAGAATTGAAGGTATTTAAATGCGATAAATGTCCGAAAGCATTTACTCGGAGAATAATGCTAAAGAGTCATCAGTCTGTTCATTCTACACAAAGGGGCTATACGTGTCAAGCCTGTGAAAAATGGTTCCCTACAAGATCAGCTTTAGTGAGACATGAACGTACTCACACAGGTGAAAAACCATTTGGTTGTAACATTTGTCACCGAGCATTTGCCCAGAAAGAAATTTTACTTCGTCATTTGATGACACATTCTGGACAGAAACCCTTCCAGTGTCAACACTGTGACAAGAGCTTCACTCAACGTGAAGCATTGAAGGTGCACATGAGGAGACATCAAAAACTTGATCCGAATGATATTCAGTTGCATCATTGTCAACTCTGCCCTAAAGCCTTTTGTCATGCATCTGGACTTAGTAGACATTTAGTTACACATACTGGAAGAACGTATAAATGTATAGAATGTGAAAAATCATTTACTGATAAAAGTTCATTGTTAAGGCACAGTCGCATCCATGCACCGAAAAAGATATTAACAAATTAA
Protein Sequence: MKTYSRKKGDSPSNVIIHVNELCRLCLAKEEEMVPIYDDETIPLSLRIMACVNLEVFEEDGLPNMICHPCKYQLEKSYQFKKKCEAADAKLRKHMKLIQQLTGQDEEGENQDNYREELKDGSHSGKSKQVKQLLADLVSTKAESGQADGDPIEVTEEELVGGYILGMNSENLEMEEPMSEDPENITLVPAEERTAKARCTIYTNRIKQEQESEDEAEEVQRAIANADHKNVYMMEVTSNNSGQGESMKLQPISDTIVEASEELKVFKCDKCPKAFTRRIMLKSHQSVHSTQRGYTCQACEKWFPTRSALVRHERTHTGEKPFGCNICHRAFAQKEILLRHLMTHSGQKPFQCQHCDKSFTQREALKVHMRRHQKLDPNDIQLHHCQLCPKAFCHASGLSRHLVTHTGRTYKCIECEKSFTDKSSLLRHSRIHAPKKILTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765894;
90% Identity: iTF_00217935;
80% Identity: -