Basic Information

Insect: Augochlora pura
Gene Symbol: -
Assembly: GCA_028453695.1
Location: CM052106.1:29590591-29592862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.37 26 5.4 5.1 1 15 216 230 216 234 0.84

2 8 6.9e-05 0.0048 17.1 5.0 1 23 244 266 244 266 0.99

3 8 5.7e-06 0.0004 20.5 3.7 1 23 272 294 272 294 0.98

4 8 4.2e-07 3e-05 24.1 1.1 1 23 300 322 300 322 0.98

5 8 0.00013 0.0093 16.2 0.8 1 23 328 350 328 350 0.98

6 8 5.5e-07 3.8e-05 23.7 2.5 1 23 356 378 356 378 0.96

7 8 0.00022 0.015 15.5 2.2 1 23 384 406 384 406 0.97

8 8 9.7e-06 0.00068 19.8 9.1 1 23 412 434 412 435 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.37	26	5.4	5.1	1	15	216	230	216	234	0.84
2	8	6.9e-05	0.0048	17.1	5.0	1	23	244	266	244	266	0.99
3	8	5.7e-06	0.0004	20.5	3.7	1	23	272	294	272	294	0.98
4	8	4.2e-07	3e-05	24.1	1.1	1	23	300	322	300	322	0.98
5	8	0.00013	0.0093	16.2	0.8	1	23	328	350	328	350	0.98
6	8	5.5e-07	3.8e-05	23.7	2.5	1	23	356	378	356	378	0.96
7	8	0.00022	0.015	15.5	2.2	1	23	384	406	384	406	0.97
8	8	9.7e-06	0.00068	19.8	9.1	1	23	412	434	412	435	0.96

Sequence Information

Coding Sequence: ATGAACGAGGAATGTCCAAGCTGTAACCAAATAACAAATACATCATGCTCGAGGCTCATAAAAGACACATGTGGTCATAGTAAATGTCGGATGTGTTTAATATATGAAGAACAAGGATGTAAAGCATGTAATAATGAACACATTGTACAAAATATTGGAAATTATGACTGTCAACCCTCAACAAAAACAAATTTTAACAAATTTTCTTCTTTCAATAAAAATATGAAGTACAATGATGAAGTAGTACTTCCATTGGAATTAGTTATTAACAAACATTCTAGATACAAAGCTAAAGATCTAGAATTGGGTTCAGTCAATTGTGTAAATAGTTCAGAGTCATCTTATGAGAATACAAGTATTAAAAAGACAGAAACTTATAACAAATCTATTATCACTGAATGTAAAAATGATGTTTCTGATAAGTTATATATTTCCAAAGAAGAAACTGAGAATGAGACATTAAGCCCACGCAAATTTCTAAACCACAATTCATCTACAGAGAATTGCTACAATGAAAGAAGAACAGATAGTTGTGGTTCAGACCCTAAAACAGAACCTCCAATGGAGGAGAAGTTAGTAAAAAGTAAATTGATTAAAAATTTTGGAAGCAATCACATTTTAATACTGCCAGGTTCTCCAGAAAGATATAAATGTAGTATTTGCAATAAAATTTTTCACAATAAAAAAGGAAAATGTTATCATGATGCTTGTGCAACAGGTATCAGACCTTACAAATGTTCTTTCTGCGATAGAACTTTTATCAAACGTTCTCACTTTGAATATCATGAACGTGTTCATAAGGGATATAAACCATACAAGTGCCATCTTTGTGAAAAAGCGTTTCCGCAACGGAATAAACTTAATAGGCACATGTTTTCACACAGTAAAGAGAAGCAGTTTGTTTGTCCTCAATGTAACAAGAGATATACTAAAAAGGATGATTTAAGAATACACTTGAATACACATAATAACACAGCTAGATATTCTTGTAAGGCCTGTGAAAAAACTTTTGGAATATTGACAAATTTGAAGCGTCATTTAAAGATACACACAAATGAAAGACCTCACATATGTGATGAATGCAACAAGAGTTTCAAAGACAAATCCCTTTTAATTCGCCATAAGAAAATACACGGGAAATATCGTCCATTTTCATGTGCACACTGCAGCAGAGTATTTCTATCCAAAAGCGAATTGAGACGTCATCTAACGGTTCATTCAGGTGAGAAACCATTTTCTTGTACATATTGTCAAACCGTGTTTAGAAGAAAAGATAATTTGCATCGTCACATTAGACACCATCATCCAGACAATCCGGATTTTAAGAACGCCGAATTACAGGACACTGCGTCCACGACAAATACAAACTCAGTCAAAAGTAAACTAATAAATTCGACACAGAAACAGAAACCAAAAAAGGCGCAAAAAATAGCTTCTAATTCGTTACCAAAACATTCGGCTAAAGTGTCGATGGTTTATGTAAGTTCTAATGATCAAATTAATTCTAGATTAGATTCAATGGGTAATATCACGCCAGTCATTAGAAATACTAGCGAAGTAAGCAATGCAGTTCCTGTCATTAACGGACCAATTAGTGCTAGGAAAATAGAGGATAAAACTGATACTAGAAAAAAAACATTTACGTACACAGAACCAATACCTTTAGCTGAAGCTGTAGTGATAAACAGACGCATCGAAGAGAAGTTGTATCCGCAAAACGTATCGAATCATAATTATTTTTTCCGAAATTATTTAAATTGTCCAGACAAATTACATCCTCCACTTATGAATCAAACGTGCCGAACAAGTTCTCTTTCAAAAAATTCTGTGTTCGCGTCTCTTAATGAAAATCCAACTTCAGAATCTGTTTCGGAATCACAGATCAGCGTTACGCGTCACAATGTAGACAAATAA
Protein Sequence: MNEECPSCNQITNTSCSRLIKDTCGHSKCRMCLIYEEQGCKACNNEHIVQNIGNYDCQPSTKTNFNKFSSFNKNMKYNDEVVLPLELVINKHSRYKAKDLELGSVNCVNSSESSYENTSIKKTETYNKSIITECKNDVSDKLYISKEETENETLSPRKFLNHNSSTENCYNERRTDSCGSDPKTEPPMEEKLVKSKLIKNFGSNHILILPGSPERYKCSICNKIFHNKKGKCYHDACATGIRPYKCSFCDRTFIKRSHFEYHERVHKGYKPYKCHLCEKAFPQRNKLNRHMFSHSKEKQFVCPQCNKRYTKKDDLRIHLNTHNNTARYSCKACEKTFGILTNLKRHLKIHTNERPHICDECNKSFKDKSLLIRHKKIHGKYRPFSCAHCSRVFLSKSELRRHLTVHSGEKPFSCTYCQTVFRRKDNLHRHIRHHHPDNPDFKNAELQDTASTTNTNSVKSKLINSTQKQKPKKAQKIASNSLPKHSAKVSMVYVSSNDQINSRLDSMGNITPVIRNTSEVSNAVPVINGPISARKIEDKTDTRKKTFTYTEPIPLAEAVVINRRIEEKLYPQNVSNHNYFFRNYLNCPDKLHPPLMNQTCRTSSLSKNSVFASLNENPTSESVSESQISVTRHNVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00860610;
90% Identity: iTF_00966199;
80% Identity: -