Basic Information

Insect: Augochlora pura
Gene Symbol: mecom-b
Assembly: GCA_028453695.1
Location: CM052107.1:10690346-10719317[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.011 0.78 10.2 0.7 2 23 341 363 340 363 0.95

2 9 0.17 12 6.4 0.1 1 23 370 393 370 393 0.93

3 9 1.4e-05 0.001 19.3 1.3 1 23 399 426 399 427 0.93

4 9 5.2e-06 0.00037 20.6 2.6 1 23 433 455 433 455 0.95

5 9 3.2e-05 0.0023 18.1 5.0 1 23 461 483 461 483 0.99

6 9 0.00064 0.045 14.1 0.7 2 21 491 510 490 511 0.95

7 9 7.5e-09 5.3e-07 29.6 1.2 1 23 873 895 873 895 0.99

8 9 3.9e-07 2.8e-05 24.1 1.7 1 23 901 924 901 924 0.97

9 9 0.00012 0.0085 16.3 6.7 1 23 930 952 930 952 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.011	0.78	10.2	0.7	2	23	341	363	340	363	0.95
2	9	0.17	12	6.4	0.1	1	23	370	393	370	393	0.93
3	9	1.4e-05	0.001	19.3	1.3	1	23	399	426	399	427	0.93
4	9	5.2e-06	0.00037	20.6	2.6	1	23	433	455	433	455	0.95
5	9	3.2e-05	0.0023	18.1	5.0	1	23	461	483	461	483	0.99
6	9	0.00064	0.045	14.1	0.7	2	21	491	510	490	511	0.95
7	9	7.5e-09	5.3e-07	29.6	1.2	1	23	873	895	873	895	0.99
8	9	3.9e-07	2.8e-05	24.1	1.7	1	23	901	924	901	924	0.97
9	9	0.00012	0.0085	16.3	6.7	1	23	930	952	930	952	0.99

Sequence Information

Coding Sequence: ATGGCCGCGGGAGGGGAGAGGCCGATCTTTAATCTGTGTCAGCGGTTGTCGCCGGTGGTGAAACGGGAGCCGATTTGTCGCGAGCCCTCTGATCAAGCGATGTCTCCTCTTATTCCAGGAAGCAGCGACGAAGGCGAGTCGACGTCGGGCACGCCGGTCGGCACCGGTGCCGGTGAGAACGTGGACATGGAGGAGAACGGCTCGGTCCGCAGCGGCAGCAACAGTAACAGTAACAGCAACAACGGTTCCAACAACCCGGTGTACAGGGACCTGAAAGCCCTGCACGCGACCAGCGCCCACGATGTCCCGCAGGACTACAACCCGCAATCCAGGCCCGCTTATCAACGCGGCTACTCTCCGGCCATGGACAAGCAGCCGAGCTACGAGAAGGATCCGCACAGACCGCCCTCGTCCAGGGAGGAGGACAAGACCTGGGACTACAGCGAGAAGGCCGACCGGAAGGACTACTCCAGGTCGCGGGACTCCTACAGAAACGACTCGTACCAGGACGCGATGAAGCAGGAGCAGAAGGAGCAGTCGAGCCCCGAGTGGGTGTCACCTGTGCCAGAAGTCGAGGTGGGAGGCTCGTTGCCCGGCGGTCCTCAGGTGCGAGCGAGGAAGGACATTCCACGAGGTGCAAGGTTCGGTCCGTTCCTCGGGAAATGGGCGAGCGAGCCTTTCAACCACCGCTACGCGTGGGAGGTCCGCACCGCCGGCAGCGGAGTGAGAGGTTGGCTGGACGCATCCCACGAGCCGAATAATTGGCTGAAATACGTGTGCAGTACCAGAAGCCCGCACATCGTCAACATGCGTCACGTGCTCATCGGCGGACAGATGGTGTACGAGGCTGTGCGGGACATAGCGGCCGGTGAAGAGCTTCTTCTCGGCATTCGAGAACCACTTCAGCTGCAGGACATGCTCGGAGAAAATACAACCGAGGACAGAAGCGATCGGGAGACCGCCTCGCAGCATAGCGGAACCATCGACGAGGATAAAGAGGACGAGGAGGAGGGCGAGACCAGGTGCACCGTCTGCGACAAGCCGTTCCAAGACATCGAACTATTGGACAGCCACTTGGTGACCTGCCACAGATACCCGGCCGAACAACACCGCTGCGACAATTGTCCCCGCGCCTACGCTTGGCGACCGTTGCTGGTCCGTCACCGTGCCATCGTCCACGGTGATCTGCGCAACTATCCCTGCGAGAACTGTCCGAAGTCGGACAATCCGCAGGTCTTCACGGATCCGTCGAACCTTCAGCGCcacatccggacgcatcacgtgggcgcgaggagccacgcgtgcaccgagtgcggcaagacgttcgcaaccagctcgggcttgaagcagcacacccacatccacagcagtgtgaagccgttccagtgcgaggtctgcttcaaggcgtacacgcagttctcgaacctatgtcggcacaagcgcatgcacgccgactgtcgcatgcagatcaagtgcgttaaatgcggacagtcgttcagcacggtcacctCCTTGTCGAAGCACAAGCGATTCTGTGACTCGACGCCACCTTCCGGTCCACCCGGCCCTCCCGGTCCTCCCGGTGTCATGCCGTTGCTACCGACTCCGCCTCCCAGCCCTTTCATGGTCTATCCTCGTCCCCCCGGCAACCTCCCAGGAGGGATACCGTTCTATCCGCCGAGCCTGATGGGCCCTTACCCGGGTATCTTTCCGAATGCCCCGAACTTCATCAACACGGCCCTCCTGTTTCCGCCGAAGGTCGAAGAGGCCGAGAAACGAAGCGACAGTCCAAAGAAGGAGCGCTTTTCACCGCCCAGAGTACTTCCACAGCACAGCAAAGTTTCTCCATCCACGGCCGAAAAAGCGACGTCCTCCTTCAGGCCTTCCCCGGCTAGACCACCTGTCCAGCCGACGACCGACGGCGAAGAGGACCTTCCGAAGAAGAGGGAGTCCAGCAGTAGGACCGAGAAGAAGACGGACTCGGAGTTAGCCTCGTCAGCTACCAGCGAGGAGACAACGGATCAGCCCCTCGATCTCAGAGTGCAGACGAAGAAACAAGAGACCAACTCGAATGCTACCGATAGGAAGAGCCGCAGTCCATCGCCTGCTCCAGCGTCAATGGAGGAGGCCCCGCCACCTCCGGAGCCGCCCAAACACGAAGAGGAAGCTTCTACACCTATGGAAGTCGATCTCAAAGACGTACCGAGTAGTCCTCATATAAGAACCAGCTTGCCCGCCGAGCAACCAGCTGCGAACACCCCGCCGCACATGGCATATCCCAGACCGATTCATCCCATGTTCCTCGAGGCGATGTATCGTGGACCTACCGGCGCGTTCCCTGGCTTCCCGGGCGGTCCTCCGCCGCCGGGAGGCGGGGCCCCAGAGTCCAGATTGCTGCCACCGCTGCCCCCGTTCGGTCCTCCGCGGGGCCTACCTTTTTTAGGAACGCTTATGAACGGGCTCAGCGGAGCTAGGCCAGGTGGAGGAGGGTTCGACCTGTTGGGTAGACCTCCGTTGGGACCGTTCCCCGGCGTCAAGCCTTACCAGGAGGCTGTGATCGCTCCTCACCACCACCACCACCACCATCAccaccctcacggcaagataaaggaccgctactcgtgcaagttctgcggcaaggtgttcccgaggtccgcgaacctgactagacacctacgcacgcacaccggtgagcaaccctacaagtgcaagtactgcgagagatcattcagtatctccagcaatctccagagacacgtaagaaacatccacgacaagcagaagccgttcaagtgtcacctctgtgagaggtgtttcggccagcagaccaatctcgacagacacctgaagaagcacgagGTGGACGACGGGAGTGGAGGCGTGTCCGTGGCGGATTCGCCTGGCAGCAGCAACGAGAACGAACGGGAGGACACCTACTTCGACGAGATTCGATCGTTCATGGGGAAAGTAACCTACGGTGGAGAGGCTGGCTACGGACTGCCCCATCATTCTGCTTATCTGCCGAGTCGGCTGCACGAGATCCACGAGTCTAAGATGGAGACCGAGTACGACGAGGACGAGGACAGCGAGGAAGGGGTGTCGCCCCTGGACGAGACCGACGGATTGTCGCCCGTTGAGACCAAAGAAACCACTCCGCCGCCTCAGTACGACCTGAAGCTGAGGGAGAAGCCGGAGCTGCTGAACAACAATACGGCCGAGCCGGTCATCGAGATTTCCACATAG
Protein Sequence: MAAGGERPIFNLCQRLSPVVKREPICREPSDQAMSPLIPGSSDEGESTSGTPVGTGAGENVDMEENGSVRSGSNSNSNSNNGSNNPVYRDLKALHATSAHDVPQDYNPQSRPAYQRGYSPAMDKQPSYEKDPHRPPSSREEDKTWDYSEKADRKDYSRSRDSYRNDSYQDAMKQEQKEQSSPEWVSPVPEVEVGGSLPGGPQVRARKDIPRGARFGPFLGKWASEPFNHRYAWEVRTAGSGVRGWLDASHEPNNWLKYVCSTRSPHIVNMRHVLIGGQMVYEAVRDIAAGEELLLGIREPLQLQDMLGENTTEDRSDRETASQHSGTIDEDKEDEEEGETRCTVCDKPFQDIELLDSHLVTCHRYPAEQHRCDNCPRAYAWRPLLVRHRAIVHGDLRNYPCENCPKSDNPQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTPPSGPPGPPGPPGVMPLLPTPPPSPFMVYPRPPGNLPGGIPFYPPSLMGPYPGIFPNAPNFINTALLFPPKVEEAEKRSDSPKKERFSPPRVLPQHSKVSPSTAEKATSSFRPSPARPPVQPTTDGEEDLPKKRESSSRTEKKTDSELASSATSEETTDQPLDLRVQTKKQETNSNATDRKSRSPSPAPASMEEAPPPPEPPKHEEEASTPMEVDLKDVPSSPHIRTSLPAEQPAANTPPHMAYPRPIHPMFLEAMYRGPTGAFPGFPGGPPPPGGGAPESRLLPPLPPFGPPRGLPFLGTLMNGLSGARPGGGGFDLLGRPPLGPFPGVKPYQEAVIAPHHHHHHHHHPHGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQKPFKCHLCERCFGQQTNLDRHLKKHEVDDGSGGVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGEAGYGLPHHSAYLPSRLHEIHESKMETEYDEDEDSEEGVSPLDETDGLSPVETKETTPPPQYDLKLREKPELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539779;
90% Identity: iTF_00184127;
80% Identity: -