Basic Information

Gene Symbol
ct
Assembly
GCA_028453695.1
Location
CM052100.1:17569669-17587912[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-27 4.4e-24 84.1 0.0 2 72 475 546 474 551 0.95
2 3 2e-32 7.9e-29 99.3 0.0 2 77 884 960 883 962 0.96
3 3 1.1e-30 4.4e-27 93.7 0.0 3 75 1116 1189 1114 1193 0.95

Sequence Information

Coding Sequence
ATGGAACGCCTTACGTGTAATTTAATCCGCCGGATCAGCCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGCCTGCAACGTCTTCAAGAGACCAGCGCGCAGGGGGCGGCACGGCTCGAGGAGGAGCTCGACGCCCACAGACAACACATCAGCAGACTGGAGAGCAAGCTCGAACGACAGAGGGACTATGACGACCTGAAGCGGGAGATCAACGCGCTCAGATCGGTCGATCTATCGCAGATACCGACCGGCGAGCCGGGCAAGAGCCTCGAGCACCTCCTAATGGAGCGCTCGAAGGCGCTTCAGCAAACGGAGAGCTTGAAACCGTCGTCCAACACCCCGGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCCACCGCCTCGCCCCACGGGGTCGGAGGTGTACCGCCTTCGTCCCACGTGCCCTCCCAGCAACCACCACCGCCGCCCCCGGCAGCAGTCTCCCTCCCGCCGCGCTCCACTCCTACACCGTCTTCAGCGACCTCGACCACGTCCAGTCTCCTGTTCCCACCCCCGCTCCAGAATGTCGAGACATTCGGCTCCTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGACGTTGGAGaggtccatcatgaatcagcaacagcaacaacaacagcagcagcaacaacagcaacaacaacaacagcagcagcaacagcagcagcagcagcaaccgcaccctcaaccacagcacccgccacagccgcatcagccgcaccagccgcaacagcaccagcagcaacagacgacggcgttgagccaattgacgcaacagcaacagctgcaacaagctcagccgttgatcgggctgcacccgcCGACGAGCACCGTCAGCATGAACCATCTACCGTCGCCCACCGATCCGTCGTCCAGCTCGAACACCCCGGCCAAGTCGAACACACCTCTAGGAACGACTCCGCTGAGTTGCCTCGACGCGACCGAGAAGGCGCCCACGCCGGTCTCCGGCCACGAAACGCCCGCGCCGCCCACGCCGTCGTCCACCACCGCGTTAACATCACCCCCGAGCTTTCAGCCACCCACCACGATCATCGAGACCGCCTCCTCGGCCTCGGTGAACGGCGGCAGCGTGATACCCGCCGTCCCGACCGCACCGCCGCCGAAGAGCCCGGCCGACCAGGAGTCCTGCCACAACAACAACAACAGCCACCATCTGGCGAACAACAACATCGGCGGCCTGAGCGTACTGGACACGCTGAAGAGCCCGTTTCGCTTCGACGACAGGACGCACCCGTTCCGATTCGGCGACGAGTTCGGCGCCGCGGGCATGGCCGGACGCCTAGGCGAGTCCCTGATACCGAAGGGCGACCCGATGGAGGCCAGGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCGTCGCAGAACCTCGACACCCTGCACATAGCCAGGAGGGTCCGGGAGCTGCTGTCGATACACAACATCGGCCAGAGGCTGTTCGCCAAGTACGTGCTGGGCCTCAGCCAGGGAACGGTCAGCGAGCTGCTGAGCAAACCGAAGCCCTGGGACAAACTGACGGAAAAAGGCCGCGACAGCTACCGGAAGATGCACGGCTGGGCGTGCGACGAGAACGCTGTTATGCTGCTGAAATCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGCGGTCCACAGGAAGGTGGCCCGCCGGAAATGAGCGACGAAAGGTTGGCGCATATCCTATCGGAGTCCGGCCACCTGCAGATGAGGGGCGAGCACGAGGTGTCGAACGACGCCGACAGCAAGAGCCCGAGCCGGATCGGCTGCCCGAGCCCGTTCAACAAAGACAGGCTCGACAGCCAGAACAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAGGAGAAGGTAGTCAGGATCTACCAGGAGGAGCTGGCCAAGCTGATGGGCAGAAGGGTGGAGGATCTCCGTGGGCCGCGAGAGTTCTCGTCCAGCGCGATGTTTCCGCACTTTTTCAGCGGCGCGCAAGGCGGTCTCCAAGGCATGGAGCGCACGCAGGACGACATCCGAATGGCGTTGGACGCGTACCATCGCGAGCTGCAGAAGCTGAACCCGACGCCGGGTCAGAACCCGTCGCTGACCGGGCTGCCGGGACTGCCGGGGCTACCCGGACTCCTGGCGCTCCAGCAACAGGCTCTTCAGCAACACCACCTCGCGACGAACGGCGGCGGTGTCCAGGATCTGAGCCTCGGCAAGATCGACCCTAGGAATAAGATGATCAACGGCGTCTCCGAGGAGGAGAAGGAGAAGATGGAGGAGGCTATAAGACACGCGGGCAGCGCGTTCTCGTTGGTCAGGCCCAAACAGGAGACCACCGCGCCGCAATCGACCCCGAGCGGATCAAGCGCGAGCTCCCCGCTCGGCAATTCCATTCTTCCACCGGCGATGACTCCCAGCGAGGAATTCTCTGGGGCGGCGGCCGCCAGTCCTCTGCAAAGGATGGCGTCCATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCATCACTCGGCCAACCAGAGGCCGCTGAAAGCCGTACTGCCACCAATCACCCAGCAACAGTTCGACATGTACAATAACTTGAACACCGAGGACATCGTCAAGAGAGTCAAGGAACAACTGTCCCAATACTCGATTTCCCAGCGCCTGTTCGGCGAGTCCGTGCTGGGCCTGTCCCAGGGATCCGTCTCCGATCTGTTAGCACGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGCCGCGAGCCGTTCATCAGGATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCGGAGAAACTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGGACCCCGATGAAGCCTATGCCGCCCACGAAGCTGGTCCAGGAGCAGCTCCAGAACGCCGCGAAGGCGCAGGCGGCGGCTCAGGCGGCGGCCCAGGCGGCGGCCCAGCACCAGCAGGAGAGCCAGATGCAGTTGGGACCGCCGCAGCAGAGTCCTCAGCTTCCCCCGCATCCGCAGCCGCCGCCGCCGATGATGCTGACTCCGCCGGGACCCcatcatccgcacacgcagctgagcatgcaggagctgcagaagaagcagcaacagcagcagcaacagcagttgaacctccactcgccgcaccatcagatgaccccgtcgcCGCTCCGAAGCCTCCACCCGCACATCTCGCCGAGCGTATACGAGATGGCGGCGCTGACCCAGGACCTGGACACGCAGACGATCACGACGAAGATCAAGGAGGCGCTGTTGGCGAACAACATCGGCCAGAAGATCTTCGGCGAGGCTGTGCTGGGTCTCTCGCAGGGCTCGGTCAGCGAACTGTTGAGCAAACCGAAGCCGTGGCACATGCTGAGCATAAAAGGCCGGGAGCCGTTCATCAGGATGCAGCTGTGGCTGTCGGACGCGCACAACGTCGACCGGCTGCAGGCGTTGAAGAACGAGCGACGGGAGGCGAACAAGAGACGGCGAAGCAGCGGGCCGGGCCACGACAACAGCTCGGACACGTCGAGCAACGACACCGCCGAGTTCTACCACGCGGCCTCGCCCGGCCCTGGTCCGGCCTCGGCCAAGAAGCAGCGGGTCCTGTTCTCGGAGGAGCAGAAGGAGGCCCTGAGGCTCGCGTTCGCCCTGGACCCGTACCCGAACGTGGCCACCATCGAGTTTCTTGCCAGCGAGCTGGCGCTGTCCTCGAGAACGATAACCAACTGGTTTCACAATCACCGGATGAGACTGAAACAGCAGACGCCCCACGGCCAGCCGGAGCCGCAGTCCCCCAGGGAGCCCGGCCAGCCGTTCGACCCCGTTCAGTTCCGGCTGCTGTTGAACCAAAGACTACTGGAGATCCAGAAGGAGCGACTGGGCCTGGGCAATGTGCCACTCCCTTACTCGCCGTACTTCAACCCGAACCTGGCCGCCCTCGTCGGCAACGCGCTCAAGGAACAGTGCTCCGGCCTGGACCTGTCGATGAACGCGCTCAAGCGGGAGCCGAACCAGGAGTTCGAGGACGAGGACGTCGAGGACGCCATGAGCAACCTCGGCAGCGAGGACTCCGAGGGCTCGGCGGGCAGCATAAAGAGGGAGCCGACGGAGACGCCGTCGTCCGCGCCCACCACCGCCAGATCGAACAGGAGAAAACCGGCGGCGCCGCAGTGGGTGAACCCGGAGTGGCAGGAGCCGGCCAGAACGGGGGACGAGGTGATCATCAACGGCGTGTGCGTGATGCAGACGGACGACTACGGCGTGAAGAGGGAGGCGGAGGAGACGATCAGGGTCGAGCCGACGCCTGTCCAGGACCGATACGAGGAGGACGCGCAGAGCGACGTCTCCTCCGTCTCCGGGAACAACGGCCCGGACCGGGACAGTCCGCTGCCGAGCCCGAAGTCCGGACAGCACAGTCCGGCGACGTCGCCGAGACCGCCCTCCACGCAGCAGACGCAACAGTCCACCGAGGAGAGTCCGAAGGACAACGTGGTGAAACACGAGCCCGAGGAGACGTGGGACTATTGA
Protein Sequence
MERLTCNLIRRISQLVEEVSRLQQSLQRLQETSAQGAARLEEELDAHRQHISRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVPSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQQQQQQQQQQQQQQQQPHPQPQHPPQPHQPHQPQQHQQQQTTALSQLTQQQQLQQAQPLIGLHPPTSTVSMNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDATEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTTIIETASSASVNGGSVIPAVPTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPREFSSSAMFPHFFSGAQGGLQGMERTQDDIRMALDAYHRELQKLNPTPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKIDPRNKMINGVSEEEKEKMEEAIRHAGSAFSLVRPKQETTAPQSTPSGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQLPPHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQQLNLHSPHHQMTPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPSSAPTTARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGPDRDSPLPSPKSGQHSPATSPRPPSTQQTQQSTEESPKDNVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729955;
90% Identity
iTF_00982081;
80% Identity
iTF_00183174;