Atex022170.1
Basic Information
- Insect
- Atta texana
- Gene Symbol
- lov_1
- Assembly
- GCA_004480015.1
- Location
- QEPB01031842.1:1575-3674[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-16 1.4e-12 47.6 0.0 1 44 436 479 436 480 0.95
Sequence Information
- Coding Sequence
- ATGGAGTCGTTTTCCCTATGTTACAGTCCTTTCTTCGAGAGGATATTCGCTGAAAATCCATGTAAGCACCCCGTGATCGTGCTGAAGGACTTCTCGCATCATGAATTGTCCACTTTGGTGCACTTTATATATCGTGGCGAGGTGCAAATCGCCCAGGAGGAATTACCGGGGCTGATGAAGGCCGCAGAGTGTCTGCAGGTGCGTGGATTGTCGTCATCGGAACCGAGGCCGGTATCGACGGAACCGAGGCCGTTATCGTTGGCGTCAACGCCGACGCGCGATCTCATTCTGGCTGGATCACCAACACCAGAAGTCGCGCGACACGATACACTGGAAGATGATGAAAACGCATTGGAGAGCACAGCGGAGATGAAACCTATCCTGCTTCCACCAACGAGGGACCATCAGGCCAAGTCGCACATTGGCCACATGAACTTTGGTATCCGCGAGAGTTGCGGCTCGCCGTCAATGCCACGTCGGAAACAGGCACGTCCGCGCCGACGATCCGGCGAATTGTTACCGCAAGATCTGAGCAGACGCTCGACCCCACCGAATCAACAGCAGCAACAAGAGGACATGGCGGAGAATCTCTCGATGAAGAAACCTATATCGCCTGGCGGATTAGATCAGCATCATGTGAAGACGGAGGGCAGTGAAGCGACGAGCAGTCCTCGTGGCTCGCCGCTCACAGGAACGAGCCTACTACATCATCCGGATCCTGTATCAGACATCCCAGCGGCCGTAGCAGCAGCTGTAGCGGCAACTGTAGCATTATCACTACCGACAATGCCGACGTTGTCGCTGTCGCAACCGCATCCTCCCGAGTACCTGACAAGCCTCAGCCAATGGCTGCCCGGGCATCCTCAAAGTCAActgccgccaccgccgccggCTCAAAGTCACCATCCACGCGAGGACAGTCCACATGGTTCCAGCAGATCTCATCCGTAtcaacaacagcagcaacaagAATCAGCTTTGCCGCGACGTAGCGCTATGGCGATGTTCACACCGACATTAGACGGCGTGACAGCTCTAGGCGGCGGACTTTTCTCGCATCATGCCACTACATATGACCGAGGCATCCTCGCGGATTCGCTGCTTACGGATAATTTCAAGCCAGAAGCGCTGCAAAATCTTTTTGGTACTCCCAGTCTCGGTCCTCCGCCGGCTAAAAAGGCAAAAAAGCATCGTAATGATGGTGACACGCCACGTAGATGGACTGATCACAATACTCGAACTCTCGCAGTTAACAGGCCCAAAGGACAACACAGCGCTCCGCGAGGTGGACCACCAAGGTCCTGGACGAATAACGAACTTACATTAGCTCTGCAACATGTTTGGGAAAAAAAGCTGACCACGTCGCAGGCTAGTCGTATGTTTGGTATTCCCTATAATAGCTTGTTGATGTACGTGCGTGGTAAATACGGGAAGAGTCTAAAGCTTGAGCAATTACGTAGGACTTGTACCGGCACCAATAACTCTGAAATCATGAATAACAATAACATCAAGCCCGTCCAGCAGTCCGCGCAGATGAGCCACGGGCTCACCGGTCTGCCGCTGCAGCATCCGGGGGACAACAGCGGCTATCCCCATCGCGGTCTACTCGGCGGCAACATGCCGCAGCCGCAGGGCTACTATCCCGCCGATTATGCCACCGCGTCTTTTCCTCTGGTGAATATGGTACATATGTTACCTCCGAGCGAGCAGAAGGCCTTTGAATCGTCCGCGAATCCGGGCGGCGATGGAGGCGGGGGTGGGTGCGTAGGAAGTGGGGGAGGAGGGGATGGGAGCGGCAGCAGTGGAGGTGGTGGCGACCTGACGAACTCCCAGACCAGCGAGACACCATCCCCCATTGTTGACCACCATCATCACCAGGAGTCATCGATGCAGCCGCAACCAACGCAATCGACGCCCGCGTTGCTGCAGCAGAACGGTTCTGATTAG
- Protein Sequence
- MESFSLCYSPFFERIFAENPCKHPVIVLKDFSHHELSTLVHFIYRGEVQIAQEELPGLMKAAECLQVRGLSSSEPRPVSTEPRPLSLASTPTRDLILAGSPTPEVARHDTLEDDENALESTAEMKPILLPPTRDHQAKSHIGHMNFGIRESCGSPSMPRRKQARPRRRSGELLPQDLSRRSTPPNQQQQQEDMAENLSMKKPISPGGLDQHHVKTEGSEATSSPRGSPLTGTSLLHHPDPVSDIPAAVAAAVAATVALSLPTMPTLSLSQPHPPEYLTSLSQWLPGHPQSQLPPPPPAQSHHPREDSPHGSSRSHPYQQQQQQESALPRRSAMAMFTPTLDGVTALGGGLFSHHATTYDRGILADSLLTDNFKPEALQNLFGTPSLGPPPAKKAKKHRNDGDTPRRWTDHNTRTLAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRTCTGTNNSEIMNNNNIKPVQQSAQMSHGLTGLPLQHPGDNSGYPHRGLLGGNMPQPQGYYPADYATASFPLVNMVHMLPPSEQKAFESSANPGGDGGGGGCVGSGGGGDGSGSSGGGGDLTNSQTSETPSPIVDHHHHQESSMQPQPTQSTPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01477024;
- 90% Identity
- iTF_00182733; iTF_00181232; iTF_00181409; iTF_00182072; iTF_00181894; iTF_01421661; iTF_01421465;
- 80% Identity
- iTF_00182733;