Atex010155.1
Basic Information
- Insect
- Atta texana
- Gene Symbol
- retn
- Assembly
- GCA_004480015.1
- Location
- QEPB01047682.1:26497-33925[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-20 3e-16 60.1 0.0 15 89 83 155 74 155 0.94 2 2 4.8 2.1e+04 -3.5 0.0 12 28 258 273 250 275 0.67
Sequence Information
- Coding Sequence
- ATGTTGTGCAGCTTTTATCGCCGCGCCCTACATAGGAACATTAAGCGCGGGTTGCCGGGTTGCGCGTATATCAACAATAATTGCAGGGCCAATAATAAACCCGAAGGGAGCACGCTCGATAGCCCGAAATTGCTGTTTAAGCGCACGATAGTCGCGGGCACTGCTGCTCTTGTTAACACTCCGTTAACTCGTGGTTCAGGCAACCTCGTAAAATTCGATGGCCTGGCTACCATAGTAGGCGGCGATAATAAGCGTACACCCATCAGCCGACTTCCCATCATGGCAAAATCCGTATTGGATCTTTATGAGCTTTACAAGTTAGTAGTATTACGAGGTGGACTGGTCGAGGTAATTAACAAGAAGCTGTGGCAGGAAATTATCAAAGGACTTCGACTACCAGCAAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTACATGAAATATCTGTATCCAtacgagaaagagaaggagggaTTATCGACCCAAGAACAACTCCAGACGGCGATCGAGACAAATCGTCGCGAGAGCCGCAGGAACAATTATGCCGCTTATCCTGACAATCAAGTACCGCGAAACCAGCACAACTCGCTGCCGCCAAATCCAATGCCGTTGCCGCTCTCGATCGCCCAAATGGCGGTGGCTGCGAACGAATCGCAACATCATGTCGTAAATGGACATCCACATGGTCCGCAACATCATCCGCAACATCTTCCACCAAATCTGGGTAATCTTCCACCTAATCAGCTTTCAGATTATATGCTGAGGATATTGAGAGACAGAAACACAATGTCCAACAATCCGATGATTCAAGGTAGCACACCGACACCGCCACCAGCAATGGCAGAAGGATTTAAATCCGGACTGCATTTATGGAATATGTACAGtccaagtaataataatatgtatccaGCAGCCCAACCTTTCTCTCCATCATCGTCTCACTCACCATTAGCACCGGCAAATAGTCCTGAACCACAGAGGGAAGCCTTAGATCTCGCAAATTCTGGGAACAGTAGATCCGTCGGTTCACCATCATTTGGAGGAGAGTTGAAGAGAAATCAAGAGGCTGGTGAACTTTCATCTCCAACGTCTTCTACTAAAAGAATGTTCTTatccgatgttgaaggaaataACATGGTGCATTCCTTGCGTATTAGACAAATGGTTAGCACTCGAGatccTACAAGACGAAGAGAATTAGAAATTAGTGTAGATATTGATGGTATTTTATATGAAGGTGTCCTGGCAGTTAAACAGGAAGGCAGTAGTAATAATGGCAGTACCTCGTCGAGCCCCGATAATAATGGAAAACGGACACAAAATAACGACTCATGA
- Protein Sequence
- MLCSFYRRALHRNIKRGLPGCAYINNNCRANNKPEGSTLDSPKLLFKRTIVAGTAALVNTPLTRGSGNLVKFDGLATIVGGDNKRTPISRLPIMAKSVLDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEKEKEGLSTQEQLQTAIETNRRESRRNNYAAYPDNQVPRNQHNSLPPNPMPLPLSIAQMAVAANESQHHVVNGHPHGPQHHPQHLPPNLGNLPPNQLSDYMLRILRDRNTMSNNPMIQGSTPTPPPAMAEGFKSGLHLWNMYSPSNNNMYPAAQPFSPSSSHSPLAPANSPEPQREALDLANSGNSRSVGSPSFGGELKRNQEAGELSSPTSSTKRMFLSDVEGNNMVHSLRIRQMVSTRDPTRRRELEISVDIDGILYEGVLAVKQEGSSNNGSTSSSPDNNGKRTQNNDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -