Atex014013.1
Basic Information
- Insect
- Atta texana
- Gene Symbol
- JARID2
- Assembly
- GCA_004480015.1
- Location
- QEPB01043842.1:12589-18764[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 9.5e+03 -2.4 0.1 57 82 151 178 132 180 0.58 2 3 1 4.4e+03 -1.3 0.0 38 65 1105 1131 1098 1143 0.81 3 3 3.2e-23 1.4e-19 70.8 0.0 6 89 1363 1444 1359 1444 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGTAACgataaaagaaagaggaaggaAGGAGATCTGGTGGACCTCATGGAACCACTTTCAGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCGCAAGGTGCGATCACTGTGTTTAATACATCGCCTACACCTATCAAGGACAAAGAGAAAGCTAAACCTACTACAATCACAGAATTAATAACTCACAAACGACCAAATACAGAggattttttaacatttttatgctTCAGAggaACATCTATTTTGCCacctaatttaaattttttcaatactggcaacaaaaaagagaaacaaggATCTAAGCCAACTCAAACTTTTATAGAGAAGACATTGTCCTCTACTAGTACTTTCATAGAAATTCAGAAGCATGAAAATACAtgccaaaaaaatttgacgaaAGTAAAGCCTATtgtttcgaataaaaaaaaagtaactagTGCGTTGCACAAAAGTATTACCAAACTTAAGACGACTACATCTACGGTTCAAGcacttaaaaagaaatatcaggAACAACGCCTTGCTAAGCAaagaatcaaaaataaatttaaagctaCTTGCGTTATGAAAACAAGATCATGTACAGAGAGATCTATGTTGAAGGCTGGTCTTAAGTTGACACCGCGAAAATTTTTACCTAAAATCAAGACAAAGAGGCATGGCCTAAGAAGTAGTGTACTACCAGAGAAAACCAGTAAACCTCTATCAAAAGCAAAAGTTACGTTACCCAAACCAAAGAAGAAAGTCAAtctaaaatcgaaaaatagtGATACTTCAAATATAGATGCGTCATCCGAAGAAGATAATGATGTCGATGACAATCAAGGGGAAGAATTACACATGGAGAAATCAACATCGCAGATAAAGCGAAACATACAAAGAGGCAtccaaaaaaagatttgcacTAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCGTCCAGTGGCATAGTCTCTTCACAAAATCTTTCCAGAAGGCCTACTAGAAAAACAAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGGAGAAAACTAGTGAGTCCGGATTTAGAAAATGATGATAACGTTTCATTTGAAAGCTTTCCCGAGCTACCAAATGCTCGTAGAATAACGCAAACGGAGAATGAACTTAAAGCCAAAGTGAAACAAAATAGTATCAAGACTATTATTAAAACGAAGGATTCTAAAGTTAGTTCTTACAATAGTAACGCTAATAAGCGATTGgataaaagcaaaaataataaattgattttaaagagCAAACGTCTGATGAGGGTACAGAAATATTGTGAAGAGGATAGCGACGAAGAATCTGAGAGCTCAATAGAAACGAGCAATTCGAGACCTATTACCAGACAGAGTCTTGGAAAGATTGATAAACCAAGCAGGAGCCTTAGATCATCCTCCAAAAACACAACAATACAAACAACTAtacaaagtaatataaatagcaAACCGAAAACTCAAATTCAAAATAGTGTGAAATCGGCTAGGgaaaaatttgtgataaaacGTAAAcgcgagaaaaatatatgtaaaacgtCGTTGGATAAGATTAAGCAAAAGAGCCTTAAAAGTAATCAAAATGAGAAGGGAGAATCAGAAGAGGAAACATTAGGAATGCTGCTCAATAAAataaggaagaaaaaagacaatgaggaggaagaggaagggCAAATCCCTGACAATATAAACAATCTGAAAGATAAAAAGGCAGCTTGCAGTGACATACAAAAAACAGCTGATCTGTCGAAGGTATCAGATGATGAGGAATCTTTTCGAGGGTTTACTAAGAAGGCGATATCAAAAGTTTTGAATTCATGTCAGACGCATGCCAATGTTAATTTGCTAGTCACAGAATCTGATAAAAAGTTGAATTTACCCAGAACATTGGATGTACCGCAAACAGCGCAAATAGCGAATCAAAGCGGAATCATTTTACGGAAAAATAAAGTAGAAACATCACCGATCAAAGACGATTTCTCGGTTGCAAATCCGCTGAACGGTGAATGCGATTTGTCTGTACGGGAAAAATCTGTATTGGATTTGTCCGTCAAGACCCAAAGCTTATTGTTGCCATCTGTAGAACAGACGAGCAAAAAATGTAATCGCGAAAATGAGGTTTCTTCCTCAAATCTTATGCCACTGTCCACTCTGCACACAAGAAAAGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGTTGAACGAAAGTTCGTTTGCTAAAGAAGAGAGCAAGCTGGAAATGGAAAACGTTTCCAGTTTTAGGTATGATTCTGCAGAAAAGTTAAAGGCGGATGTCTCGCATTTGTCTATTTCGACGAAAATCCAACATTTGGTACGCCCAGTCAACGTTACACTTTCGAAATTATCGGATAAGACGAATTTGAAGGATCGTATGGGGATACACagcaaaaatgtaatatcgaTAACATCTGATACCGGTAATATCCGTAATTCTGGAGTGAAGCAACAAAATGCGacaaatgttgataaaaataagagcaCTAGCGAAATGAAAGAGATTGTCAAGAATAAAATTGGGAAAACGAACAAAGATACTTCTTTTGCTGAAGATATTAGCGACACTATGTCTAAAACGGATCAAAACTCCGTAGTAGATGATGCTGTAGAAAAGAAGTCGCCAacagagaagaaaatatttcaaccgCGGAAACCTTTTTTGCCCAAGGTTAAGGAACGTAAAACTGTAATACCGAATGCAAATGCGTTTTCGCCAGAGAACGAGAGCAGCGTTTATGCGTTTGAAAGTGAAGCCGAAGTTCCTGTTAGCACACCATTCCGAAGAAAGATCAGAGATAATGCAAAACATTCGACTGCGGTAACATTATCACCTACAGAGATTATAATATCTGAATCCAAAGTAATTGCTAACAAATCAAGTTTGAAAGATTCTAAATTATTGGATAGCAAGGAAAAATTGTCGAACGATTCCGTAACGACTATAAAGAAAGAACAAGAATTGCAAGGACTGAAGAACATAGCAAATACAGATATAGGCGTGAGCAAGTTTGAATTGCCTAACAATTTTGCAAACTTGACCACTGTCCAAGTGCTACCACTCGACAAACTCACGACAAGTTGGAGTAACGTAAATTGTAGTGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACCACACAGGAACACGAAAACAATACGAGTCAACAGAAAAGTACTGAGATATCTACTCAAACCGAAATGAGTAACGAAAATGATGACGACAACGATGgacatctattttatattccgTTACAGGCTGTTACGAGAGGCGGCCCAAATCTGGTACAAGGTCAACAGCTAATACAGGGCGTGGCTGTTAAACTCGGTACGGAAGGACCGACCGGCCCTAATCAAAGAGTTCTCCTTCGAGCTAAGTTGGTCACCAAGCCACCGTTATCAGTGGCACGTTGTCCACCGATAGGAACAGTACAACCGACAACACGTACTCCACCTAATCCTGCAGCAATGACAGTGGAACAGCAAATATCATCAACGTCAACGACCGCAACTGTGTCAACCACGATGGCAAGTATGTCGAACAGTATGGAGATGCAATCAACGTcattgatgaaaaatgaaatgccAGTGCCAAGTCTGATTCGTCAAAGTGCTAATACGATCATAAATAGCAATTCAGCTGAGAAACTCACAAAATCACCTAAGTCTAGGGAAAGAAAAGCTTCTATAGATTCGACAAAAAGCGGGAAGAGaacACAAATGAAATGCAAACAAAAGGGATCAGAATTATCTGCTTCAAGCAGCACGACATTTCTAGGCGCGAAAATCGCGAATGATGAAGCTCGCGTGGTCGAGGCGCCAACGTTTCATCCGACAGAGAAAGATTTTCAGGATCCATTGGAGTACATAGATAAGATAAGGCCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAGccAGAATGCAAGGTATCTGATGATATGAGATTCACCGCTTATAATCAATATGTACATCGCATGCTACACAGATGGGGTCctaatgtaaaagaaatgatggctattaagaaatatttagctACTCAGAGTATTACTTTGACTCAACCACCATggATTGGTGGAATGGAGGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTGGGTGGATTGAAAGAagtaattgagaaaaaaaagtggCAAAAAGTAGCAGATGGTATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAGCTAgatgatatttattgtaaatatttattgccaTATGATACATTATCCCcagaggAACGTGGAAAGTTGTTTGACGAAGTTGAAACTGAATGGATAAGAAAAGAAAGCAAAACTTTGCAAAGGCAAGAAGTGTCATTTAATGATAACGATGAGGAAGAGGATGAAGATAGTTCTGATGAAATTGAAGAATGTATCGTAAAAGTACGACAAgacatattatttctatttttattataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGAITVFNTSPTPIKDKEKAKPTTITELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNTGNKKEKQGSKPTQTFIEKTLSSTSTFIEIQKHENTCQKNLTKVKPIVSNKKKVTSALHKSITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKATCVMKTRSCTERSMLKAGLKLTPRKFLPKIKTKRHGLRSSVLPEKTSKPLSKAKVTLPKPKKKVNLKSKNSDTSNIDASSEEDNDVDDNQGEELHMEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSGIVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSFESFPELPNARRITQTENELKAKVKQNSIKTIIKTKDSKVSSYNSNANKRLDKSKNNKLILKSKRLMRVQKYCEEDSDEESESSIETSNSRPITRQSLGKIDKPSRSLRSSSKNTTIQTTIQSNINSKPKTQIQNSVKSAREKFVIKRKREKNICKTSLDKIKQKSLKSNQNEKGESEEETLGMLLNKIRKKKDNEEEEEGQIPDNINNLKDKKAACSDIQKTADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDKKLNLPRTLDVPQTAQIANQSGIILRKNKVETSPIKDDFSVANPLNGECDLSVREKSVLDLSVKTQSLLLPSVEQTSKKCNRENEVSSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSAEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRMGIHSKNVISITSDTGNIRNSGVKQQNATNVDKNKSTSEMKEIVKNKIGKTNKDTSFAEDISDTMSKTDQNSVVDDAVEKKSPTEKKIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESEAEVPVSTPFRRKIRDNAKHSTAVTLSPTEIIISESKVIANKSSLKDSKLLDSKEKLSNDSVTTIKKEQELQGLKNIANTDIGVSKFELPNNFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEHENNTSQQKSTEISTQTEMSNENDDDNDGHLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPPNPAAMTVEQQISSTSTTATVSTTMASMSNSMEMQSTSLMKNEMPVPSLIRQSANTIINSNSAEKLTKSPKSRERKASIDSTKSGKRTQMKCKQKGSELSASSSTTFLGAKIANDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWIRKESKTLQRQEVSFNDNDEEEDEDSSDEIEECIVKVRQDILFLFLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01354407;
- 90% Identity
- -
- 80% Identity
- -