Atex024244.1
Basic Information
- Insect
- Atta texana
- Gene Symbol
- ARID5B
- Assembly
- GCA_004480015.1
- Location
- QEPB01045245.1:5830-11572[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-23 4.8e-20 72.3 0.0 1 89 65 151 65 151 0.95 2 2 2.8 1.2e+04 -2.7 0.1 6 33 510 538 508 539 0.82
Sequence Information
- Coding Sequence
- CCGAAATTAAAAGGTAGACCACGAAGAAAACGTAAAAAGCGCAGTGCTTCGCCGGGCGAATCCTCGAACGAGAGCGAAGCTTCAGTGGCGTCGACGTCGAAGAGTACGTCGGCGATCACCAGTCTGGTGATACCCACGGTCGGAAGACCGCCCTTGTCCGGGATACGGCGGAGCGAAAGGAAGACCAGCgcggaagaaaagaaattcatcACCGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTATACAAAAGTGCAAATGCTTGGTGGTTATGACTCTGTCAGTGCTGGGCGCCTTTGGAAGACCATATACGATGACATCGGTGGTAACACGGGTTCTACTAGCGCAGCGACTATTACACGTAGACACTACGAAAGATTATTATTACCTTACGAAAGGTATCAGCGAGGCGAAGAAACAAAAGTGAGACTGAATCTCGGACGACGTACCAAGAGTATGAGTGCATCCGAAGATTTAGACATTAAGGAGGAATCGAGCGAGCTCTATATGTCGGAGACACCTCCACCAATAGATGTAATTCCTGCGACCACAACATCACCTTTACAACCAATAATGTCAGCAACAACGACGACTTTACTCTTGAGTGAGAAACCCAAAGCCGAAACTGGCAAGACATCCTCGTTACGTAGCGTGCGAGTGAAGCCGGAACGCCTGAAATCTTTGAATACAATAATCGCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACATCTATCTCGACGCCCAATAGCACACCCTCCACAACACCGACGAATGGTACCAGTAACAATCAGAGTGTCTTGGAGAGGCAGCTCAATAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCTGTGACTAGTGTAGCGGCAAACGTGTCGACGGTTGTCACTCTAACGCCTCCACCTGAGAAGGATATGAAGGAGATCAAGTTGGATCCCAAGCAAACAAGTTTGCTGGCACAAGGCAAGGAAAATATACCACTATTCGGCGGCGAGAAATTCGCGGAAAAGACGATAATGCCACCAGTCTCCAGATCACCTGAAGTGATTGACCTTGAAAATGAGAATGACACGAGTCGAGACAAAATAATCATTCCCAGCTTTAAGAAACGTAAACTCGAGATTTTGCGTGAAGGCGGTCTCGAAGTTACCGCCGTCGATCTGGACGTGCGACCGAGCGTAATTCAAAGCTGTGTTGGTATGTCGCCGCAACAACATCAACAGAAGCAATCGCCATCATCCTTGCCTGCTACAATGAAGTCTACTGAAGAGAAGCAACCGTCGATCTCGCCGTATCCACTTCCAGTTACGCCCAACTCCATTCCTAAATTAATATCTGTCACTGTGACACCCGACATAGGACATATGTTACCGTCGCCGCATGAGCATCAAAATCATTCGCCGCGAATACCAACGATTAAACAATTACCAGTTCAtcacaacaataataatattagcatgatgaataacaataatatgataaacagTCGAATAATAAATCTCGGTAGCTCGAACAATACCGCGCTATTGCAACTGTATGCGAATGCGAACGTCGTACCATCAACCATTTCGTCTGTGCAACAATCAAGCCATCGTTTCGTTCCACCAAATATTCCAAATGGCAGGTTATTACTACCAAAGGTGACACAATCAAGGTCGATATTTATGCACAATGAAAGGACGGTTTATGGAAATCCCAAAGATATTTTGAATTCTCCTCCAAAGTATCACTCGCCGCATCCGCAtcaacaacagcagcaacaacgCTCGCAGCAACAACATCCACAAATGAGCTCCAGCAACGACATCGGACAAGGAGGTATTCTCGATCTGACGCAAAAGAACGAGAAACCGACGTTCCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGTGGCTAAGGACAAATTGTCGGACAGATCTGTCGTCGACTGTCCAAAACGAATACCCTTCCCTGCCTACCAAAATGTAATTGACAGTCGAACTATCGCGTCGAATAACCTCGAGATTACGCTAGTGAATCCCAAGCACAAAAACAATCATCACGTCATACCGTCTCATGTTCAAATACCGAGTCCACCTAATAAAAATGCGATAGGAACGATAAGTAGCGTGCAAATGAGACAGCAACAATCGCAGCAACAAGTGAACGGAAAGTATACGGTGAGAAATGAGCCTATTTCGCCGTACACACCAAGGAAGCCAAGTCATCCCATCATACCAAACGTACCCAATCTGAATCATTTGAATCATAGTGGAAGTTCATTTCCTAGAATTCAGGCAACGACATTGCAAGCACAACAACAAATGAGCATTGATAGAAGGAAAGCGACTGCGGAGGCCGGTAGGGATCATCAACATCGTAGGATTAGTGAAGGCGAGAAATCATCTTTGGCAGcgcaacagcagcaacatcatcatcatcatcatcaggAATCTAGACAAAATGAGACTGTGCGGCGACACAGTCTACCCAGCATACCATCGGGATTCGTACCGCAAAATAATTCTGCTCCCTTTCCTCTGCCACAATTGCCAAACGCGTCCGGCAAGTTCCTACCAATTCTGGACCCCATGTACTACTCCACGTTCTATAACGGTTTGTTCCCACCGCCGATTCCGCCCACGGCCACCGCAGCTGCTGCCACCGCGTCGTCGTTTTTACCGCCGGAATTTAACGCATATTACAAGGAATTACTTGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAACCGCCGCATCAACAGCCGGCCGCTCCAACGTCTAAATAG
- Protein Sequence
- PKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSLVIPTVGRPPLSGIRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNLGRRTKSMSASEDLDIKEESSELYMSETPPPIDVIPATTTSPLQPIMSATTTTLLLSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVAANVSTVVTLTPPPEKDMKEIKLDPKQTSLLAQGKENIPLFGGEKFAEKTIMPPVSRSPEVIDLENENDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDVRPSVIQSCVGMSPQQHQQKQSPSSLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPHEHQNHSPRIPTIKQLPVHHNNNNISMMNNNNMINSRIINLGSSNNTALLQLYANANVVPSTISSVQQSSHRFVPPNIPNGRLLLPKVTQSRSIFMHNERTVYGNPKDILNSPPKYHSPHPHQQQQQQRSQQQHPQMSSSNDIGQGGILDLTQKNEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPVAKDKLSDRSVVDCPKRIPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHVIPSHVQIPSPPNKNAIGTISSVQMRQQQSQQQVNGKYTVRNEPISPYTPRKPSHPIIPNVPNLNHLNHSGSSFPRIQATTLQAQQQMSIDRRKATAEAGRDHQHRRISEGEKSSLAAQQQQHHHHHHQESRQNETVRRHSLPSIPSGFVPQNNSAPFPLPQLPNASGKFLPILDPMYYSTFYNGLFPPPIPPTATAAAATASSFLPPEFNAYYKELLASSQPRLTGMTGQPPHQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254583;
- 90% Identity
- iTF_00417350;
- 80% Identity
- -