Acoo000860.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- Zmiz1
- Assembly
- GCA_001594045.1
- Location
- NW:742799-781202[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.029 1.5e+02 1.5 0.6 4 24 458 478 455 483 0.91 2 2 2e-25 1e-21 75.6 5.5 3 49 540 586 538 587 0.96
Sequence Information
- Coding Sequence
- ATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAGGACATCCCCTCGCAATTCAATCAGATGCAGAGCCAACATGGAATACCCCACCAAACGTACAATGCGGGGTACGGCCAAAGAGGACCAATGGCAGGAATGGGGCCAGTCGGGATGAACAACTTTAATGGCATGGGCACGATGAGTCCTATGCACACTATGAATTCCATGAATTCGATGAACAGTATGAATGGCATGAACTCGATGAATCCTATGACAATGGGAGCAATGAACGGTATGAACGGTATGAGCGGTATGAATGCTATGAGCGGAATGACATCCATGAACTCCATGAGTAACATGGGTAATGTAGCCATGAACAACATGATGGGACCCAATAATATGCAAATGAACAAGATGCAGGCTCAGCCGCATCAAGGTTATCCACGGAGATTAGCGCCTTATCCGAACCCAGCCATGCATATGGCGCAAAAGCGACAGCAGGTTCCGTATGCTGCTCAGAATCCAGCGACTATGCAGCAGAGTTTCAATGGCATGACAACGGCCCCGAGCTATCCGAATACCTATCCTACCGGAGCGAGGCCAAATTTTCAACAACAGTATCAGTCTATGCAAACCATGAATCCCACGGCGCCCGGTTTCGGACCTAATACGATGATACGAGGAACGAATATGAGGCAAACAGCGCCGACTTACAATACTCCGTCTCAGACGGCCGCCGCAAACCAATATGGTTATGGTAGTAACGGCGTTCCTGGTGTCTGCATGGTTCCACCTACCTCGGTTAGTAACCAGTTCGTCGGTCATCAGCCAAACGCGGGATACGGTGGCGGTAATGCGTCATACGGAACGTCTGCCGTGGTAACCAGTCAGTATCAACAAGATGTGGTGTCGATGAGATCGACGAATGGAGGCAACGTGAATTATCAGCACAGTCCCATTCCCGGCAATCCGACGCCACCGTTGACACCCGCCACTAGCATGCCACCTTATATCAGTCCGAATCCAGATATCAAGCCTAATTTCAATGAGATGAAATCCCCCGTTAACATTCAAAATGATGAATTGAGACTAACATTCCCCGTAAGAGACGGCATAATTCTTCCACCTTTCCGCCTAGAGCATAATTTGGCTGTTAGCAATCATGTATTTCAACTGAAGTCCACGGTACATCAAACGCTAGTGTGGCGATCAGATTTGGAGCTACAGCTTAAATGTTTCCACCACGAAGATAGACAAATGAACACGAATTGGCCGGCGAGTGTGCAAGTCTCCGTTAATGCAACTCCCCTCGTGATCGACCGCGGAGATAACAAAGCTTCCCATAAGCCTCTTTACTTGAAGGACGTCTGTCAAGCAGGAAGGAACACAATACAGATTACCGTATCAGCATGCTGTTGTtcGCATCTATTCGTACTTCAATTGGTTCACCGACCTAGTGTGCGAAGTGTACTTCATGGATTACTACGTAAGAGGCTGTTGACAGCAGAGCACTGTATAACGAAAATCAAAAGAAACTTCAGTAATACCATGTCAAATAATAGCATGCAATCGGAAAAAGATGTAGTGGAACAAACAGCACTAAAGGTACTCTTAAAATGTCCTATTACCCACAAACGCATTACACTGCCAGCTAGAGGACATGAGTGCAAACATATACAGTGTTTCGATTTGGAATCATATTTGCAAATGAATTGCGAACGAGGTAACTGGAGATGTCCAGTATGTTCaaaatctGCACAGCTGGAAGGTCTAGAGGTTGATCAGTATATGTGGGGTATTTTGAATACATTAAATACCACAGAAGTTGATGAAGTGACGATAGACTCACTCGCTAACTGGAAACCTGCGAAGAATTTAACTGGTATTAAATCCGAAGAAGAAAACGATTGTAAGAGAACAACCAAGGCCATGTCGCCAGGCAGTATGAATATGCCAACTATGAACAATTGGGATATGAATCAAGCTATGAGTCCTTATATACCACCCGATATGAATAGTATTGTGAGCGGTTCGATGATGAACAACACATCTTCCACGTATCCGAATAATAGCATAAATCATCGAAACACGTCCGGTGGAACCTACGAAATAAATTCTGGGACGAATACTATCGGCAATAATGATTATGTCAGTGGAACGGGTCCGCTTTCGCACTTAAACGAATCCGTTAATTCTTTAGATCCTCTCAATGCCATGGAGAAATCACTGAATGATCAGATGCCTCATACTCCTCATACGCCACACACTCCGCAATCTACTCCTCATACACCGGCTGGTGGTGCCAGTGGGCCACCGAGCGTTCCGCCCGCGTCGCAAGAATCCACAGGAAACCACAACACCTCCGGTAATACGAGTACAACCATAAATAACGATACCGCTGCAGACATACCGTCGGACTTAAATTTCGATCCCGCTGCAGTTATAGATGGAGAAGGTACCGGTCAAGAGGCGTTAAATCTTTTGCCAGACAATGTGGATGCAATGGAACTTCTGTCGTATCTCGATCCACCGGACCTAAATACTCCACCTAGTAGCGGAGCTAGCAGTGGTAATCCTTCCTCTAACGACGATATATTGGCACTctttgaataa
- Protein Sequence
- MVAAASATATATASVVAMQDRQDIPSQFNQMQSQHGIPHQTYNAGYGQRGPMAGMGPVGMNNFNGMGTMSPMHTMNSMNSMNSMNGMNSMNPMTMGAMNGMNGMSGMNAMSGMTSMNSMSNMGNVAMNNMMGPNNMQMNKMQAQPHQGYPRRLAPYPNPAMHMAQKRQQVPYAAQNPATMQQSFNGMTTAPSYPNTYPTGARPNFQQQYQSMQTMNPTAPGFGPNTMIRGTNMRQTAPTYNTPSQTAAANQYGYGSNGVPGVCMVPPTSVSNQFVGHQPNAGYGGGNASYGTSAVVTSQYQQDVVSMRSTNGGNVNYQHSPIPGNPTPPLTPATSMPPYISPNPDIKPNFNEMKSPVNIQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHQTLVWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGDNKASHKPLYLKDVCQAGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLHGLLRKRLLTAEHCITKIKRNFSNTMSNNSMQSEKDVVEQTALKVLLKCPITHKRITLPARGHECKHIQCFDLESYLQMNCERGNWRCPVCSKSAQLEGLEVDQYMWGILNTLNTTEVDEVTIDSLANWKPAKNLTGIKSEEENDCKRTTKAMSPGSMNMPTMNNWDMNQAMSPYIPPDMNSIVSGSMMNNTSSTYPNNSINHRNTSGGTYEINSGTNTIGNNDYVSGTGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTSTTINNDTAADIPSDLNFDPAAVIDGEGTGQEALNLLPDNVDAMELLSYLDPPDLNTPPSSGASSGNPSSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863647;
- 90% Identity
- iTF_00129412;
- 80% Identity
- iTF_00181663;