Acoo000906.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001594045.1
- Location
- NW:501699-549403[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.22 2.2e+03 -2.5 6.9 59 103 95 139 73 170 0.47 2 3 0.14 1.4e+03 -1.9 0.6 74 94 265 285 245 310 0.45 3 3 2.9e-101 2.9e-97 324.0 9.0 1 218 766 978 766 978 0.92
Sequence Information
- Coding Sequence
- ATGGCAGAAACACGCGAGATGGAATCGCCTTCGGCCCGTCAGGACTGTTTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGGCCGAAGCAGAAAGCGCACCGTCGCCAGGCGGGATGATATCAACAACGATAACAACGACAACAATGGATGCCGATGACAACGACTACGCGACGTGTCCATCCGTCGTACGGGACTCGTGTGAAGATTTGGTGATGGTATGCGAGAGATTGGACGAAAAACCAGAGGACGAAGAAGCAAGACAATCGAGAGATAAACCGGAAGCGAATCAAGGTgaagaggaaaaagaagaaaaagaagaaaaagaagaaaaagaagcaaaTACAGATTTAACACTAGACAAGAAAGCCAACGAGGAAAATCAGAAAGACGAAATTGGTGCGAAATCGACGGAGGATACTCTTCAGGAACTTGAAGGATCACCAAGAATGCTTGATTCTGAAAATCGCAATATCGACGAGTCGAAATTGTGGGAGAATGGGATCGAGAAGTCCGTATCGCCAGACGTTTCCAGGAAGAGACCGGCCGCGAGTGATTTCCTGTCGATCGGCGCGGAGATCAAGAGGATCGGCATCGAGATCTCGGAGGAGCAGGCGACCCAGCTAAGGAACGACGTCAGGAGACTGTCACCAGTGTTGGTGAGCCTGCGGGAAAGAACCCTAGGTGAAGTATCTCTAACCTCGGAGTCCTATCTCTTCGGGGATGAGTTGGACGGCAGGAAAAGGTCCACTGCGGGATCATTTATAGCGAATGATTCCAGAAATCAGGACGTCGATCAGAATCGCGAGAAACAGGATGCGAGTGAGCAGAAGAAGGAGGAGAAGGAAGCGATCGGTAAGATTGACTCGGATCCTGCAGAATGCACGAGCAGCGGCGACGTCGAGGCGACATTAAACTGCGTGAGAAGAAAGCTAGAGTACGTCAGCGAGGGCGAAATTGCGATGTTCGGCGTTGACGTGGTTTCTCCGATATTCtcaaaaaatgacaatttggACGGAACGATAGAATCCTGTCAAGACGACATCAGAGATGCGAACATGGCCACGAACGCTAAAAGCGAGTCTTGCACTCCGATTAAAAAACATGTCGGCGAAGCAGCAATGAGTCCTACAGTACCATCAAGTCCCATCTGTCGAAATTTAAGTATCGTACTGAATCGCATCGAAAATGATGACTTAAAACAGAAAAGTGTCCTAACAGATACAAACGTCGACGAAAACATATGGAATTACGTTGTCGGGGAAAGCTCATCTTGTTCCAATGGAAAAAGGAATTTCGTCGAGGAGGAGTGTGATTCGTTCAAAGCGACTTCGGGGACTCCGGAGAAGAATCCGAAGAAGCAACGATGGCATAGCCCCACTAATAATTCCAGTCCAAtgactagaaaaaaatatgagtcGATAGAGAGTGCTCATAGTCCAGACAGTGGAATGGTCTTGAAGAAGTGTAAAGTGGTACTGGAGCGAATGAATCAAGTTACGGAGAATCCATCGCAGTCGGAAAACGCCGAAGAGAGTGGAGCTTCAAAGGAGATCGAAAAGGACGACGAACCCGCGCCTATCGCGGTGATTGGTAAACTCGAAGAGGATGAAGAGGTGGTGCTGGCGAGCTCGTCGCCTACGGCCGAGGACAGCCGCGTGTCCAACGAGCTGGACTCATCGGAGACGATGCCAAGTTCGCCGGAAGAGGCGCCGGAAGTATCGGTGGATGTTGCCGAGGGCGTCGACACCGAGACCGAAACGGAGACCGGCTCCGACAGTTCGGAGGTGTCGCCCATCACCAGCATCCGTCATGAATTGCGTGACGTCGATATGGCGCCCGATCAACTACCGTGCTCCGAGGGAGTCACTTTGTGCTGCGTGGAGGCGATGGCGCCGATCATGACGAGATTGGAGGCCGACCGACCGGAAGCGTACACGGAGGACTCCGCCGAGAGCCTGGCCTTGGCGACTGGTGCCAGGGACGAAGTCAGGTCCGACGGGAGCGATTCTGGTCTGGGGAACGAGATCCCTGGTGACCCAGGACCGGCTCCTGCACCGGAAAGTGATTCAGAAACCTCTTTCCTCGACAGACTGCCGGATGACATTCTCTCTGATAAGGAGAAAGGGGTGAACCAGTTGGATGGCTACGCGGCGTCCTCGGGGACACCCGGGACGCCGGGACAGTTACCTCTGACGAGCTTCCGGACACTTCCGGCCAAGAGCAATCTAAAGCGTAGACTGACCGACTGCATGGAAAGTGACGAGTCGCGGGGCAACGTCGACGAGCCTTTGAAGAAGAAGCGCAACATTCAATTCGATGCAGTGACGGTCTATTACTTCCCCAGGGCGCAGGGTTTCACCTGCGTACCTTCCCAGGGCGGCAGCACCCTGGGCATGAGCGCGACGCACACGCACGCGGAGAGGTTCTCGTTGTCGGAGCACGCAGCCGAGCAGAGACGGATCCACCGAGCGCGTCTTGCGCAGCTGCGTTCGGAACGCAACTGTGCGACCAACTGCGTAACCGAGACGGCGTCTAGCTCGGAGGACCCGAGCGATGACACCGACGAAGAGCCGAGCGATAACGAGGAACTCGACATCGACAGTTATTACTTCCTACAGCCGGTACCCACGTGGCAACGCCGAGCGCTTCTTAGAGCTGCCGGCGTACGGAGGATAGATGCTGTCGAGAAAGATGAATGTCGTGATATCCGCGCTAGCAGAGAGCATTGTGGATGCGGTTGCAAGGGATACTGTGATCCTGAGAGCTGCCCTTGTAGCAGGGCCAACGTAAAATGTCAGGTGGATCGACCAGGTTTTCCTTGCGGCTGCACACGAGACGGTTGCGCGAACAGTACAGGCAGAATCGAGTTCAACCCAGTGAGGGTACGAACGCATTTCATCCATACGTTGATGCGATTAGAACTGGAGAAAAAGCAACGTGACGAAGACGGTGGCGGCGATCATGATCAGGTGATGGACAATCAGGGACAGAATGGCAGAGGAGCTCGTCCTCTAAGGGATATCAGTTCCTTGGGGATGGAAGCTACCGTGGGTGACGTGTGCGCTATTCCGGGGACGGGACCCGGGGGAGGTGGATTCACGACTTTACACTATGAGACAAGTCACGAAGGTGTCGGAGCTGGTGTGGCTGGCTGCCAACCAGAGGTGCCTGGCACACGGGAGGACAGTCTGGACTTGTACGCCATTAGGGATGATTGTTACGCGAATGAGGATGCAGTAGACAGCAGTCAGTCGGTCGTCGTGCAGCGGAAGCTGCATCCAGAATTCGGCCAGACCTTTCAGAGCTTTTCGCCCGGCGTGCAGAGCAGTGCCgccggcggcggcggtggtggcggtggtggcggcggTAGCGATGGTGGCATGAGCTTCCAGCAGTCTTCGTATCAGGATTACGGATCGCCGTATGCGAGTTTGCCATCTACATCGCGATTTCAGCCGCCGCCGCCGCAGTTCCAGTCGCCGCCTAATCCGGCTGCCTTCACGCATTACGGTCCTTACGGTGGTGGGCCTCAGAATGCCGCGGGTGCCACTCTTCAAGGCGGTTGTGCCGCCCAGGTACACCAAATGCCGCAGCCACCGCCACCGCAGGGtcaacagcagcaacagcagcagcattCGTCCTATGATGCGACGGTGTTCGCGCAGGATGACGCTACGAGTACCGCACAATACACGAACCTCACCAACTCGGTGCAGCCGATGAATGCAACAGTGGTGCAGCAGATGCAGGGTAAGCTTGAGCCCTTCTCGGAATTGCTTAGCGGCAGGTACTCGTATTACGGTGAGATACATGAACCGCAACAGCATCACGGTACTTACGGTACTCACGGTACGACCGGCAAAGTCGCGGAAATGATCGAGCCCAGTCAGGTCACCGGCGAGCAACAGCCCGATGGCGCGTCCGAGGACTGTGACGAGAATTTCGGTGAGATCATCAAGAAGTCTATGGTGGAGACTGTGTCCGCCTAG
- Protein Sequence
- MAETREMESPSARQDCFVEAQEDSTSVEAEAESAPSPGGMISTTITTTTMDADDNDYATCPSVVRDSCEDLVMVCERLDEKPEDEEARQSRDKPEANQGEEEKEEKEEKEEKEANTDLTLDKKANEENQKDEIGAKSTEDTLQELEGSPRMLDSENRNIDESKLWENGIEKSVSPDVSRKRPAASDFLSIGAEIKRIGIEISEEQATQLRNDVRRLSPVLVSLRERTLGEVSLTSESYLFGDELDGRKRSTAGSFIANDSRNQDVDQNREKQDASEQKKEEKEAIGKIDSDPAECTSSGDVEATLNCVRRKLEYVSEGEIAMFGVDVVSPIFSKNDNLDGTIESCQDDIRDANMATNAKSESCTPIKKHVGEAAMSPTVPSSPICRNLSIVLNRIENDDLKQKSVLTDTNVDENIWNYVVGESSSCSNGKRNFVEEECDSFKATSGTPEKNPKKQRWHSPTNNSSPMTRKKYESIESAHSPDSGMVLKKCKVVLERMNQVTENPSQSENAEESGASKEIEKDDEPAPIAVIGKLEEDEEVVLASSSPTAEDSRVSNELDSSETMPSSPEEAPEVSVDVAEGVDTETETETGSDSSEVSPITSIRHELRDVDMAPDQLPCSEGVTLCCVEAMAPIMTRLEADRPEAYTEDSAESLALATGARDEVRSDGSDSGLGNEIPGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGYAASSGTPGTPGQLPLTSFRTLPAKSNLKRRLTDCMESDESRGNVDEPLKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERNCATNCVTETASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSTGRIEFNPVRVRTHFIHTLMRLELEKKQRDEDGGGDHDQVMDNQGQNGRGARPLRDISSLGMEATVGDVCAIPGTGPGGGGFTTLHYETSHEGVGAGVAGCQPEVPGTREDSLDLYAIRDDCYANEDAVDSSQSVVVQRKLHPEFGQTFQSFSPGVQSSAAGGGGGGGGGGGSDGGMSFQQSSYQDYGSPYASLPSTSRFQPPPPQFQSPPNPAAFTHYGPYGGGPQNAAGATLQGGCAAQVHQMPQPPPPQGQQQQQQQHSSYDATVFAQDDATSTAQYTNLTNSVQPMNATVVQQMQGKLEPFSELLSGRYSYYGEIHEPQQHHGTYGTHGTTGKVAEMIEPSQVTGEQQPDGASEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00181297;
- 90% Identity
- iTF_01477557;
- 80% Identity
- -