Acoo007687.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- Trerf1
- Assembly
- GCA_001594045.1
- Location
- NW:3748879-4041150[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 3.2e+03 -2.5 0.2 29 42 1236 1249 1234 1250 0.88 2 2 4.4e-10 2.7e-07 29.7 0.0 2 46 1402 1446 1401 1446 0.96
Sequence Information
- Coding Sequence
- ATGACGATCGTgcgtggtggtggtggtggtgctTTCGTTGACGACAGCGGGAATCGTTCACAAGCACGAAACATTAGTGCCCCAAGGGAAAATGAAGAACTCTTCTTCGTTCTTCACCTCAAGAGTGACAGCGGGCTAGTGGACACAGATCCAGGTCGAGTTAGCAGCATGACAGCCATTAACTCGggTCCGGTCGGAGAGGTGGGCGGCGTGAGGCTGCCACTGCAGTCACTACATGGATACGGATCTGTGTTCATGTACTCGGCGTCGACGAGTCCCGGGGGTGGAGGTGGCCAGAGTAGCGGAGGCGGGGGTGAAGTCACTCTCCGCCTCCGCGAACCCGAGGACATTCCTGAAGAGGTCCTCGCCCGCCTCGAGGACACCGCCAccctctctatctctcttcaAAGCGATGCAGTCCTGAGGCTAGGGGCGGCTGGCGCAGGAAATGGGAACTTAGAGTTGTTTGATAGTGAGAGCGGACCGGACCTCACACTATCACCTCAAACCTTCACGTCAACGGCGGAGGCCTTCATCAATGACAATAGCGACAGTCTCGGGGTTCCAGGAGACAACGATACCGGTAGCAGCGAGGAATCGAGGGCCGGTGGCGGTGATCCCGGGAAGCTGGGAGTGAAGAAATCGAGACTGAAGGCCTCCTCGCCGAACAGGCAGGGACCACAGCAGTGTCAGATCTGCGGGAAGGTGTTCAACAATGCATCGGCGCTTACGAAGCACAAACTGACGCATAGCGACGAGAGGAAATACGTGTGCACGATGTGCGGCAAGGCGTTTAAACGGCAGGATCATTTGAATGGACACATGCTGACACATCGAAATAAAAAGCCGTACGAGTGCAAAGCCGAAGGATGCGGCAAGTCTTATTGCGACGCGAGGAGCCTGAGGAGACACACGGAGAATCATCATGCCGGCAGTAAAATCAATGACATCATCGGTCCTTGCAGCCCGACGACCGGACCTCATACGCCGAATACCCCCGGAAGTAATCCCAGCACACCAAGCACACCTGGTGCAACCTCCACAACGAATGGTCATGGGCACGCGGCCTTAAAGCAACTTCTTTCCACCGAACCCGCGCAAACGCAACAGCAAAAGagcGCCACATCTCCCGGTGCCAGTAACGATGGCCTCACGAAACAACAGCTGGAGCTCATCCAGCAGATCATGCAGCAAACGCAACAACAGACAACCacgcaacagcagcagcaacagcaacgAACCGCGACTCCCTCGGCATCGGTAGCCACACAAATACAAAAGACACAAAAACCGTCCATCAAATCCACCGCGTCGTCCGGCAATATTTCCAACAATTCCACAAGCGGAAACGCGACCAACAGTGCGAGATCGAGTCCGAAACCGAAGATGTGGAATCACTCTCAACATCATCATGATCATCATCAACAccaacagcagcaacagcaacagcaacagcaacacCAGCAACATCCATACCAACAGCAACAACAACCGTACTACGGACATCACCATCAATACCAAAGCCAACATCATCAGTACTCGCAGCAATATTCACCGAATTATCTCTATCGATTTTCCCTTCAGcaacagcagcagcaagcGCAGCAGCAGgcgcagcaacagcagcaacaacaacagGTCGGCTCGCCGGGAAGCGGAAATGTAGGGAAGGGCAGTCCATCTCCCGGTAATTCGTCTTCCCCCGGAACAGTCACTACTTCCAACAAGACCCAAACGGAACCGAAACCGGTGGAGTGCAATCTATGCcatcgaaaatttaaaaacataccGGCCCTTAATGGCCACATGCGACTCCACGGCGGTTACTTCAAAAAgGACGCGGAGAATAAGAAGAGCGAGAAGAAAGAAGTCGTTGGGCCACCTCTGCAGACGGCGTCCGTTAGCGTGAGAGCGCTCATCGAAGAGAAGATCATACAGAAGAGAACGACAGCAGTGGACGCGAATGGCAATCAGCAATCTCGTACGAATACTACCGCTTTCACCACGCAAGCCGATGCCGTTTCGCAAACCGTCGTCAAGACGAATTTTGCGGTTCCGGCTCCGCCGCCTTTGGCAGCGGGGGAAAAGGTGCGTCGGTTTTCCGATGGTGAACACTTCCGGCAACCCAATGTCACCGTGGGCCACACAACTGTACAGAAACACTTGCAGGAAACATCCAAAACTCAAGCTCAAGCACAAGCGCTTGCCGACATGATTCTGAAGGGTACGAAGGTAGCTGTGAAGAGAACAATCTCTGATCCGGGACAAAGATTACACTTGACTTATCAGCAGCCTGTACAATCAGCGACGACCAACCAACAACCAAATAATCAGCAGCCACAAGCACAACCTGCGGTAACGGAAAGCTTTACGATGACAGGATACGCCGAAGACGGTGGTTACTTCAGCCCAAGTCTGCAGGACGAAGTATTTCAACAGGTTACAACGGTTCCTGATAGCGTGCTCCTACACGCTACCCACTTGGATTCGATTCAGTTTCAGACGGCCAATCTGTTGCAAGAACAATCTACCGAACAGCTGCAAGATATAACACTGGAGGACAGATACTCCTCGCAGCACACAGTCAATCCAGATCTTCAAGCATTGGTGAATTCGCCGTTACCCGATTCCCTGGCCGAATTTAGTACTTACGCCGCGCAATACACGGAAAGTCCTCATACGTTACCAACTCAATCACCCTTACCGTCGCCTTTAACGCGACACGATAGCCCGAGTTTTACGTATCCAACGCCACCGGCCAGCCAGGAAGGCTTGCTCACTGGAAGCCTGCCGCTGTTAAGTCCTCAGGAAGACCCGGAGAATGTGAGGCACGTATCATCGCCGCTGTCGGCGGCGTTTTACACCACCACGATGTCATCTGCTGCAGCTGTGGAGGAAGCGTTGAATGAAGTCTTACCGGGTGAATCCGAGGCAGATGCGGACCTTTACGGGTCCGGTTCGCCAAATTCGCCACTGCCAAGCCCGTTGTCGGCGACATCGGCACCGTCGCCGCTGCCACCGTCCTCTGTCTCGTCGCCGGGACCGGTTGCCTTTACAGGCACGAACTTTCCCGTGTCACCGCATAATGCGCTTCAAAATCAGATGATGCCGAATTCGGAGGATCCTTTGCTTTCCTCAACCTCGAAGGATTTTGCCGCCTCCGGTCGTAGACGATTCGAGTTCCAATCGTACAAAGTAATTACGAGCCAAAACTTGATGGACTTCGGTCTTGGAAACGGCAGCGTAGCTGGTATCGTCGTTGACAACAACGGTGACGTCAAACTGATACAGACAGCGGGTTTGCAAAAGGCGAATGTGTATGTGCAGGCGGGTTCTCTCAGTCCTGCGCTGACATTCAAGAAGGAGATCCGCTTAGCGACACCAAAAATCGAACCCGTGACCGTAAATCTCGGCCTAAACGTTCAAACGACAAATCAGCAGCAATGCAACGCGGGTCAATTTAATCAACAACAAATTGTTAACCcggctaaattttttattcaaaataatcacACGACGAAAAACAATATCTTGAGACATAAAACGGTCACCGGAAATTTACCAATACCCATCGATCAGATTAAACAAGAGATGTTAGATGAGGACGTGTTTCTCAGTCCTGGCAGTTTATCCGCCAGCAGCCCTATACGACACTATCGGAAGAGGCCACGCATGGATAGCGGCCAGTACACCAGCAGTTCACATTCTTATCCATCGCGTTTGCGAAAAGCTTGCGATCGTCACTGGGACAGCAGCTACACACCGCCACCGATCCTAGATCCATCTCGTCCCGGTCCGGGGCTGTACGCGAGATTACATCAACACGAGAGAGACTCGGACTTTAGCTCAGATGATTCTCAAGGAAACGACGGTCCACCGCCAAGAATCAACATTGGCACAAGGTATCAAGCCATGATACCTCCGATGGAGTATGACGGAGATAGAGGGAACGACGGACCCGAAGCCGATCATCTTTTATGGGATCCCGGCATAAACAATGTGCTCACGAACACTGAATTGGAGATGTACCTGCAGTTTGCGTGTTGCGCCGCAGTGCCAGGTGGTGGTAGGAACAAAGAATATGCGCTTCATCTGTTGCATATGTGCAAAGGGAATATTcatGAAGCGATGGTGAAATTGATGCGACCAACGCCTATTCTACCAATGGAGCATCCTCTGCTCAGTTACGAGTGCCACGAATCCGATAGATGGACGTCACATGAAATGGACGCATTCTATCAGGGACTGCTCAAGTACAACAAGGATTTCTCCGCGATTTCGCGAGACGTCGGTGCCAAGACTGCGAAACAATGCGTGCAGTTCTACTACCTTTGGAAGAGGCTCTGTCCTGACGAGTACAAGAGTCTGCGTATTTGTCATGGAAAAGCGAAGATCAAGAGCGAAATTAAAGATAGCAAAGATACCAAAGAGCTACGTGACGCCATCGCGTCCGTGTCGGAAATGGACTTTAATGAAGACAAATCGATCCTTCATCGTACACTGCTACAATCAAGCGGAAGAGAAAATTCGGCGACTCTGACCACTAGTGAAGGAGAGCTGAGGTTATTCGCATACGACTGTACAGatAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGAAGCACCCAAACCGCCCAAATCGGCAATACCAGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCTACCCCACTTCACTACCCTTGCAAGATTTGCGGGAAagTTTTCAACAAAGTAAAAAGCAGAAGCGCGCACATGAAATCCCACAGGCCAATACCCTTACCCGATTCAACGGGTCAGGAATCTAAGCGATCCACGCAACCGTCGAAAGCGCAACAGCTGCAGCAGCCAATGCCATCGCAGCAAAGccaacaacagcagcaacagccTGATAATGCTACGCCGCAAGCTCAAGATCATCAACAACAACTGCCCGCGAGTATCAGCGACAACAGCGCCAAAAATACAGCACATTTATGTCATAATCCTACGAGGCCCCCATAG
- Protein Sequence
- MTIVRGGGGGAFVDDSGNRSQARNISAPRENEELFFVLHLKSDSGLVDTDPGRVSSMTAINSGPVGEVGGVRLPLQSLHGYGSVFMYSASTSPGGGGGQSSGGGGEVTLRLREPEDIPEEVLARLEDTATLSISLQSDAVLRLGAAGAGNGNLELFDSESGPDLTLSPQTFTSTAEAFINDNSDSLGVPGDNDTGSSEESRAGGGDPGKLGVKKSRLKASSPNRQGPQQCQICGKVFNNASALTKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGSKINDIIGPCSPTTGPHTPNTPGSNPSTPSTPGATSTTNGHGHAALKQLLSTEPAQTQQQKSATSPGASNDGLTKQQLELIQQIMQQTQQQTTTQQQQQQQRTATPSASVATQIQKTQKPSIKSTASSGNISNNSTSGNATNSARSSPKPKMWNHSQHHHDHHQHQQQQQQQQQQHQQHPYQQQQQPYYGHHHQYQSQHHQYSQQYSPNYLYRFSLQQQQQQAQQQAQQQQQQQQVGSPGSGNVGKGSPSPGNSSSPGTVTTSNKTQTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAVDANGNQQSRTNTTAFTTQADAVSQTVVKTNFAVPAPPPLAAGEKVRRFSDGEHFRQPNVTVGHTTVQKHLQETSKTQAQAQALADMILKGTKVAVKRTISDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTESFTMTGYAEDGGYFSPSLQDEVFQQVTTVPDSVLLHATHLDSIQFQTANLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPENVRHVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESEADADLYGSGSPNSPLPSPLSATSAPSPLPPSSVSSPGPVAFTGTNFPVSPHNALQNQMMPNSEDPLLSSTSKDFAASGRRRFEFQSYKVITSQNLMDFGLGNGSVAGIVVDNNGDVKLIQTAGLQKANVYVQAGSLSPALTFKKEIRLATPKIEPVTVNLGLNVQTTNQQQCNAGQFNQQQIVNPAKFFIQNNHTTKNNILRHKTVTGNLPIPIDQIKQEMLDEDVFLSPGSLSASSPIRHYRKRPRMDSGQYTSSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQAMIPPMEYDGDRGNDGPEADHLLWDPGINNVLTNTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPILPMEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKSLRICHGKAKIKSEIKDSKDTKELRDAIASVSEMDFNEDKSILHRTLLQSSGRENSATLTTSEGELRLFAYDCTDSFSGSVTVTMAGSTQTAQIGNTSHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSTQPSKAQQLQQPMPSQQSQQQQQQPDNATPQAQDHQQQLPASISDNSAKNTAHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122371;
- 90% Identity
- iTF_01355686;
- 80% Identity
- iTF_00182194;