Acoo002369.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- dnajc2
- Assembly
- GCA_001594045.1
- Location
- NW:260309-263940[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-05 0.052 12.8 0.0 3 31 442 474 440 484 0.85 2 2 6.7e-13 4.2e-10 38.8 0.0 3 44 561 606 560 608 0.92
Sequence Information
- Coding Sequence
- ATGACAGACGGCACCGGGAACGAGGACTCCGCAGCGTTCGATTCCATATCCGATCCAGGCAAAACCAATACCAGTACAGCGGGTCCAGTAGTTTTATATTCAACTGCACTGGCATGGCGAACCCAATTCCATCGCAGTCTTACACGAGGCAGTGTGTCGGAATCATCAGATGAAGAGGAAGATCTGTCTCAGTATCAATTTGAGGATGATCTTGAATACCTCAGGTCATTGGATCCAAGAGACTGGAAGGATCAGGACCATTATGCTGTTCTAGGCATAAAAGATCTTAGACATCGAGCGACTGAAGATATTATCAAAAGAGCTTacaagctgaaaatattaaagcatCATCCTGATAAGCGCAAAGCAATGGGCGAGGAAATCCGACCAGACGATGACTACTTCACATGTATAACTCGTGCTTGGGAAACCCTAGGGAGTCAAATTAAGAGACGAAGCTACGATAGCGTTGATCCTTATTTTAATGACAATCTTCCAGATGAGAAGGACTGTCGGAACAATTTTTACGAGGTGTTGGGTAAAGCTTTCAAAGAGAATTCACGATGGTCTATGAAAAAGCCCGTGCCACGATTGGGTGGCCCATTCATGTCACGAGAGAAGGTAGAACAGTTCTACTCGTTCTGGTACGACTTCGATTCCTGGCGCGAGTATTCGTATCTTGATGAGGAAGACAAGGAGAGTGGTCAAGACCGAGACATGCGGAAATGGATCGAGAAGAAGAACAAAGCTACAAGAGCAAAAcggaaaaaagaagagatgaTGCGAATACGCACTTTAGTGGATATGGCTTACAACATAGATCCTAGGATAAAGAAGTTCCAGCAAGAGGATAAGGATAAGAAGAATGCTGTGAAGAGAGCAAAGCAGGAGGCAGCAAAGGCTAGGcaacaagaagaaaagagaatagCACGGGATGCGgcagagaaagaaagattagagaaagaaaaaagagaatccGAAGAAAGGGCAAAGCAAGATGCGCTGAAGCAGGAGCGAGAAGTACAAAAGAAGGCGTTACGCAAAGAAAGGAAGGCGTTTAGAGATTTTTGCAAAGCAAACGATTATTTTGCGAAAAGTTCGGAAGAGAGTCTCCGACATATGGAAAGCGTAGAGAAGATCTGTGAACTGTTCAAGCTTATGCAGCTGGAAGAGGCGATGAAGAATCTTCAGACTAACGGCAGAGCCGCGTTTTTAAGCATCGTTGAAGAGGCTGAACGAATAATCGAAACAGAACGCCGTGTAAATGTCATCAATAACGATGCGAGAAATACGCCTGATAAGCAGACCAAAACTTGTACTGCACCCTGGAGCGAGAATGACTtgcaacttttaataaaagcaGTTAATCTATTTCCTGCTGGTACTAATCAACGTTGGGAGGTGGTAGCAAATTTCATTAACCAACACAGCACTTCCACCAGTGGAGTTACACGCGATGCCAAGGAAGTTCTGGCAAAGGCCAAAAGTCTACAATCAACTGACTTTAGCAAATCGAGTTTAAAAGAACAGGCGAATAAGAAAGCTTTCGACAATTTCATTGCTGAGAAAAAGAGCAAGGAAGCTATTGAAGAAAGAATGCCAGCTGTTACGGAGCGTCTAGACCATCCAATTGCGAATGGTGTTGCTGTAGAATCCAAagagatgaaaaaagaattggcACCCTGGACACCGGGTGAACAAAAACTCTTGGAACAAGCACTGAAAACCTATCCAACAACGGTTTCAGACAGATGGGATCAAATCGCAGCGTGTATACCCACTAGAACGAAAAAGGAATGTATGAAAAGATATAAGGAACTGGTTGAGCTTGTGAAGGCGAAGAAAGCGGCGCAGatgacaaaataa
- Protein Sequence
- MTDGTGNEDSAAFDSISDPGKTNTSTAGPVVLYSTALAWRTQFHRSLTRGSVSESSDEEEDLSQYQFEDDLEYLRSLDPRDWKDQDHYAVLGIKDLRHRATEDIIKRAYKLKILKHHPDKRKAMGEEIRPDDDYFTCITRAWETLGSQIKRRSYDSVDPYFNDNLPDEKDCRNNFYEVLGKAFKENSRWSMKKPVPRLGGPFMSREKVEQFYSFWYDFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMMRIRTLVDMAYNIDPRIKKFQQEDKDKKNAVKRAKQEAAKARQQEEKRIARDAAEKERLEKEKRESEERAKQDALKQEREVQKKALRKERKAFRDFCKANDYFAKSSEESLRHMESVEKICELFKLMQLEEAMKNLQTNGRAAFLSIVEEAERIIETERRVNVINNDARNTPDKQTKTCTAPWSENDLQLLIKAVNLFPAGTNQRWEVVANFINQHSTSTSGVTRDAKEVLAKAKSLQSTDFSKSSLKEQANKKAFDNFIAEKKSKEAIEERMPAVTERLDHPIANGVAVESKEMKKELAPWTPGEQKLLEQALKTYPTTVSDRWDQIAACIPTRTKKECMKRYKELVELVKAKKAAQMTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733895;
- 90% Identity
- iTF_00128132;
- 80% Identity
- -