Acoo005114.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- CoRest_1
- Assembly
- GCA_001594045.1
- Location
- NW:1160271-1167068[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-10 3.1e-07 29.6 0.0 3 46 128 171 126 171 0.97 2 2 8.7e-13 5.4e-10 38.4 0.0 3 46 249 292 248 292 0.98
Sequence Information
- Coding Sequence
- ATGGTCTTGGCAGAGAGAAATTCGGAAAATGTGCGTAACGGCCGTCGATCGCGAGGCCCCAGCCCTAACGTACAATCTGACTCGTCCAGTGAAGAAGAAGGAGTTCCAGCAGAAAAGATAAGAGTTGGACGAGATTATCAAGTCGTCGTTCCAGAATTTGTTCCTGTTAATGAACGTCGATTGGATCAGTGTCCTGATAGGGCATTATTAGTTTGGTCACCTACCACGGATATACCAGATCAAAAATTGGatgaatacattatattagctaaagaaaaatatggtTATAATGGAGAACAGGCATTGGGAATGTTATTTTGGCATAAGCATAATTTGGAACGCGCAGTCCTGGATTTGGCAAACTTTACACCATTTCCTGACGAGTGGACGGTTGAagataaagtattatttgagCAGGCGTTCCAATTTCATGGCAAAAGTTTCCATCGCATTCGACAAATGttaCCTGATAAATCTATCGCAAGTCTTGTGAAATACTACTACAGCTGGAAGAAGACACGAACTAGAACATCATTGATGGACAGGCAAGCACGTAAATTGACGAGCGGCTGCAAAGAAGGTGAAAATGGCAGCGAAAATGGAAGTGAGCTTGGTTCCAACACAGATAGCGAATCCGAAGAAAAAATACAAGCTAACAAACAACAAGTAAGTGCACTGAAGCGAAAGACAACGGATGGTATCGACCATCTACGACCGCCGGAAGTGTCAGGCCGTATAAATGCACGCTGGACAAATGATGAATTGCTATTAGCGGTTCAAGGCATTAGAAAATATGGAAAGGATTTTGCCGCAATTGCTGAAGTTATTGGTACCAAAACTGAAGCCCATTTACGATCATTTTTCGTGAACTATCGACGAAGATATAATTTGGATGCAGTACTGAAAGAATTTGAGGCTGAAAATGGTCCCATTCTTATTGatgatgaaaaagaagaaaagatggATGTTGAACAATCAAATGATACTGCAGAATCATCTCAAAAGGGGAAAGCTTCCACTGGGCCTGGACAAGCTGCTAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNVQSDSSSEEEGVPAEKIRVGRDYQVVVPEFVPVNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGCKEGENGSENGSELGSNTDSESEEKIQANKQQVSALKRKTTDGIDHLRPPEVSGRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPILIDDEKEEKMDVEQSNDTAESSQKGKASTGPGQAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860314;
- 90% Identity
- iTF_00754561;
- 80% Identity
- -