Acoo000508.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001594045.1
- Location
- NW:3706185-3801744[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 4.5e-15 54.3 0.1 1 45 557 602 557 602 0.96 2 2 7.3e-18 8.1e-15 53.4 0.0 1 43 982 1025 982 1027 0.94
Sequence Information
- Coding Sequence
- ATGGCGGATTGCCCCTATGCCCGCTGCATACAGGAACGCAGACACATCCGACGGGAGCTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTCGGTCTGGAACGGGTAGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCACAGCCCCACCATCGGCTTTACCCGGCGTTGTCGTCGTCCTGCAACCAGATACCCGGGAATCTGGACCAGATTGGGCCGCAGCTGCATCACCCGGCACCCACGTCGTTGTCGTCGACGGTGCTAACGACAGCGACGActacgacgacaacgacgacgacgacgctTGCGACCGGTGTGGTGAAACAGGAGAGTCTGCAAAGGCATCATCTGCAGAACCACCATCACCTACCCGCGCCGGTTCAAGACCATTtacagcagcaacagcaggaGGATTCGCGCCGTCTAAGGCCGAGCGAAGTCAAGATCGAGACCGCCGACGAGGAGCTCACAGACGGTGCTGCGCGGGAGGATACTTCGACGAGGACGACGGATACGGCGACGTCGACGACGCTGACGACGACGGCGGAAGTAGCGACAACGACGGCAACGGCGACGATCATCGGCATCGCAACGACCACGTCGACAACGACAACAGCGACCGGCACGACGACGATAGTGACGAGACGGCGACGTGGACGCCGGCAAAACGACGGGGAGGACGTCGACGGGGAGGAGGACGGCGAAGAGAACGAGGAGGAAACGGGACGGGGCCAGAACGAAGCAGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGCGATCAGCCCTCTCAGAACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAATCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTACTGAGGGTAAAAAAAGAGGAGGAGCTGCAGGAAGTACCGGGTTCTGGCGGTACCACGATTCTGACGACACCGGCGACAGATTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGACGGGAACGCAGCCGCGACGAGCGTCGCGACGCCGTTTCTCCTTGGAAGACGCACGAGCCCGCCGCCGGAGGATTGGAAGCCGCTCGACAAGTGTTACTTCTGCCTCGACGGCAAGCTACCCCACGACGACCAGCCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCGATGTCGGTCCAGGTGGATCCGATGGCGGCGTCCGTGGTCGCCGCCGCTCTCAGCGGCACTTACCCCACCTTGCTGCCCCAATGGTGTTTACCGCCGAGGGAGGCGCCCCTTGTTGGGGTGCAGACCCATCAGGACAGCGCCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCAGAAATTCTCAGGACAACAACATATCTCTATTGGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAGACTATCCTGAACTCGTGTTACCGCGCGAAACCGCGAATGACCGGACCGGTTGTGACCgcggcggcagcggcggcggcggctgCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGGACTTATACCGAGGAGGAACTGCAGGCCGCCCTCAGAGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCAGCGGTAATCTACGGGATACCGCGTAGTACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCAGCCActaccaccaccaccatcaccaccaccactaccaccactactactactactacaaCACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAATTATCCGGTGCAGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTAAAGCCTCTGCTGTCGTTGGAGGATCTCGTGAGGTTTTCTACACTCGAAGGGACTGGTGGTGATTCTCTTAGAAATTTGTTGCAACGAGGACATGAGACAGGAGCCGAATGGCCGGGATTGGAACACGCGAACATCGGTCCCTATATTCAGAAGATGTTGGCTGCCGCTGCACCATTAGGCATGGACACGCGAGACTATCGCATACCCGAAGTAATGAGAAAACTGATGAGTGAAGACAAGAGGCTGAACAAGAACGTGAACGGTGATCAGTCACAGCCGCATCACCATCAGCACCATCCTCTCGCCGCACATCAACAGTCACAGtcgcagcagcagcagcgaGGACCCATGACGAACGACGACTTCAATCCCAATATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATATTGAAAATTCCGTCCTACAAGCCCGCCAGCACGCCGGGTTGTTCCAGCAAGAACGGCGAACCGACTTCCGCCGCATTCGCCCAGAGCTTCGCGGCTGCCGCCTCGAGTCCGGGCCTTCTGGAACGAGCTAGTCCAGCGTTTTCCAGTACCAGCAGCCCCACGAATTCATTGGTAGGCAAAGCGGTGGCCGTCAATTTCCGCGACGTCATCGCTAAGAGCATTAGCGTCAAGTTCCAAGAGGGTCAAACGCCCAGCGCGGCTGGCATACCGGGCTGCCAATCAGCTGGTGTGGTTCCATCGCAGCAGGCCATGATAACAGACCCGAGTCCGTTCAAGAGGGGTCGGTACACACCTCCACAACCGCCACAACAGCAACAGCAATCGCCGGCGCAGCAATCGCAATCCAAGCAGCAGTCGCAAGAGGCGAACAAATCGAAACCGGGTACTGGCGGCAAGGGCACCAGACCTAAACGCGGAAAATATAGAAACTACGACAGGGATAGCCTTGTCGAAGCGGTACGCGCAGTTCAGCGCGGTGAGATGAGCGTGCATCGTGCTGGCAGCTTTTATGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTTATGAGGCCGCGCAAAAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACTGCGACGACGGCagcggcggcagcggcggcCGCGGCGATGCGGCCGGGCACTGCTGGCGTCGACAAGAAGCCGCAGCTGAAACCGCAGAAACCGTTCACACCGCCCGGCGGTATACCCGGTCCGAATGGACTGAAAATGCCTCCGTTTATGGAGGGCATGCCCCACCTGCCATTCGGACCCTTCAACTTCTGGAACCCGACGCCCTTCATGCCCTCCCCCTTTATGGGTGGCGCGCCGAACGTGCCAATCCTTCCGGAACAATATTTCGCATCGCAGAGAATGCGTGGACTGCAGGAGCAACAACGAAACGCCACGATGGTACAGCAACAGCATCAGCAACGAGACCGAGATGGAGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGTCGAAGGCGCCGCGCGACATGGTGGAGAGCATTTATGATGGGCCCGGGGCGAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTTGAGACAGGCATTCCAAGGGACCAGCGGGCGATAGCGGAGGCGAGAAATCAGCAACAACAGTCGTCATCGCAACACCCGGAGACGATGAGTAGCAAGACACTGATCGATCAACTCTGCAGAAACTCGAGGAGGACTCCGCTGCCGCGGATGGCGCAAGACAGTAGCGAGGACGAAAGTTATCGAGGACCAACGGGCAGGATGGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTTGATCTTAGCCCTTCACCGTCGGAGAGAGGTCGCACGGAAGATGGCAGCGATCGGCTGACGTCACCACCGACACCTCTGTCGATTTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATCGATCGCAGCAGCAGAGAGCGTGAGGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGTCtgcaacagcaacagcaaccACAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCCGTGAGCGGGCTGGTCGTGCAATTGCAGAGGGGCTATAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAGCAGCCGGCGGCGGCGGAGCAGCGCAGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSGTRSSESQPHHRLYPALSSSCNQIPGNLDQIGPQLHHPAPTSLSSTVLTTATTTTTTTTTTLATGVVKQESLQRHHLQNHHHLPAPVQDHLQQQQQEDSRRLRPSEVKIETADEELTDGAAREDTSTRTTDTATSTTLTTTAEVATTTATATIIGIATTTSTTTTATGTTTIVTRRRRGRRQNDGEDVDGEEDGEENEEETGRGQNEAEKRLKLDEDADRSAISPLRTENDRATRDHPTANATDTEGTKERTEEIALERAPVTQGLLRVKKEEELQEVPGSGGTTILTTPATDSEGTRSGLLCRDGNAAATSVATPFLLGRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSAAAADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHPLAAHQQSQSQQQQRGPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFAAAASSPGLLERASPAFSSTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPSAAGIPGCQSAGVVPSQQAMITDPSPFKRGRYTPPQPPQQQQQSPAQQSQSKQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDGVGVSGTADAAGTSNSRSASMSKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRAIAEARNQQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRMVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRSTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254708;
- 90% Identity
- iTF_00016606;
- 80% Identity
- -