Acoo005562.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- ct
- Assembly
- GCA_001594045.1
- Location
- NW:17036-158026[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-28 2.9e-24 84.1 0.0 2 72 533 604 532 609 0.95 2 3 1.4e-32 6.9e-29 98.9 0.0 3 77 938 1013 936 1015 0.96 3 3 5.8e-31 2.9e-27 93.7 0.0 3 75 1169 1242 1167 1246 0.95
Sequence Information
- Coding Sequence
- ATGCAGGCCTCCGCGGAGGCCAACTCGCGGAATATAACGACCATGGAATGGCTCTACAAGAAGGAGCCCTTATTCACGCTTGCCCATTTCTGGCAACAGAGAGCGACTTCGGCGGAGAAAGAAATAGCCGCGTTAAAAGAACAACTCGCCGCAACGAATGACAACAATTCTAAGACTGAGGGACACCAATTGTCTCAGCCTCCTCAGGGAAGCGATCAACAACAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACACCAACCTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGATCAACCAATTGGTTGAGGAGGTGTCCAGGCTACAGCAGAGCCTGCAACGCCTTCAGGAGACGAGTGCGCAAGCAACGGCGCGGCTTGAGGAAGAACTTGAAGTGCGCAGGCAGCACATCAACAGATTGGAGAGCAAATTGGAACGGCAAAGGGACTATGATGATCTGAAGCGCGAAATCAGTGTATTGAGATCAGTCGACCTTTCGCAGATACCAACTGGTGAACCTGGAAAGAGCTTGGAACATCTTCTTATGGAACGTTTCAAAGCGCTCCAACAAGCCGAAAACTTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCGCCACCGCCTCCGACAGCAGCCTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCATTTCTCGGTGAAGAAATCGTAGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAGccaacagcagcaacagcagcaacaacagcagcaacagcagcaacaatCACAGCCATCTCAACTAAGCCAATTAACTCAACAGCAACAACAATTACAACAAGCCCAACCGCACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCGCCGGGTGCGGATCCATCGTCCACTTCAAACACTCCGGTGAAATCGAACACACCGATCGGTACAACATCCTTGGGCAGTTTAGATGTCACTGAGAAAGCGCCAACGCCAGTATCGGGACATGAAACACCAGCCCCTCCAACTCCCTCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAATACCCCTTCAGTTTCCATCAATGGTAGCGGTCTCACACCCGGCGTACCAAGTGCACCGCCTCCGAAGAGTCCACCTGATCAAGAATCATgtcacaataataataatagccaTCATCTAGCAAATAACAATATCGGCGGACTAAGCGTTCTCGATACGCTGAAGAGTCCGTTTCGATTTGATGATCGAACGTATCCTTTCCGATTCGGCGACGAATTTGGTGCCGCCGGTATGGCCGGTCGGCTGGGTGAATCCCTCATTCCAAAGGGAGATCCTATGGAAGCGAGATTGCAGGAAATGTTGCGTCATAATATGGACAAATACGCCTCACAGAATCTTGACACTCTTCATATAGCCAGGCGGGTGCGTGAACTATTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATATGTTCTCGGGCTAAGTCAAGGCACGGTCAGCGAGTTACTTAGTAAGCCTAAGCCTTGGGACAAGTTAACCGAAAAAGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGATGCTGCTCAAGTCCCTCATCCCCAAGAAAGGCAAGGAACAAGGAATGCCAGCATTCGCACGTGGACCACAGGATAGTGGTCCGCAAGAAATGAGTGATGAAAGATTGGCACATATTCTGTCGGAATCGAGCCATATGCAAATGAGAGGTGAGCACGAAGTATCGAACGATGCTGACAGCAAGAGTCCGAACAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTAGTAAGGATTTACCAAGAAGAACTGGCTAAGCTGATGGGCACGAGAGTGGAAAATCTTCGTCCGCGAGAGTTCCCTAGCGCGATCTTTCCACATTTTTTCAGTGGTACGCAGAGCAGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGATTAGCATTGGACGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGACTGGACTACCAGGATTGCCTGGATTACCAGGTTTATTGGCGCTTCAGCAACAAGCTCTTCAACAACATCATCTAGCCGCGAATGGCGGCGGTGGTGTTCAGGACTTGAGTTTAGGCAAAGTAGATCCGcgcaataaaatgataaatggtgtgtcagaagaagaaaaagagaaaatggaAGAGGCAATGAGACACGCCGGAAGTGCGTTCTCTTTGGTGAGGCCGAAGCAAGAATCGACGGGTCCTCAATCGACGCCTGGCGGTTCTAGCGCAAGTTCACCGCTTGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAAGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCATCATTCGGCCAATCAAAGACCGCTGAAAGCTGTGCTTCCTCCGATCACGCAACAGCAGTTCGACCTGTACAATAATCTTAATACGGAAGATATTGTGAAAAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCGCAGCGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCATATGCTGACCCAAAAAGGTCGAGAGCCCTTTATTCGGATGAAAATGTTCCTCGAAGATGACAACGCGGTGCACAAGCTCGTCGCCAGTCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcTTGCGGAACACCTATGAAACCTATGCCACCAACAAAACTCGTTCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCCGCACAAGCAGCGGCGCAACAGCATCAGCAGGAAAATCAGATGCAACTCGGCCCGCCACAACAAAGTCCTCAACATCCACAACATCCACAACCGCCACCACCAATGATGTTGACACCACCTGGTCCTCATCATCCTCATACTCAACTCAGCATGCAAGAACTCCAAAAGaaacaacagcagcagcagcaacaaatGTCATTACACTCGCCACATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCTCACATTTCACCAAGCGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACAACAAAAATCAAGGAAGCGTTATTAGCTAACAATATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCGCAAGGCTCTGTCAGCGAGTTACTGAGCAAACCGAAACCATGGCATATGCTCAGTATAAAAGGTCGAGAGCCTTTCATTAGGATGCAGCTTTGGCTGTCAGATGCACACAACGTTGATCGATTGCAAGCATTGAAGAATGAACGACGAGAGGCGAACAAGAGACGACGTAGCAGCGGTCCTGGTCACGACAACAGCTCTGATACTTCAAGCAACGACACAGCCGAATTCTATCACGCGGCATCACCTGGTCCGGGACCTACTACCGGGAAGAAGCAGCGCGTTCTTTTCTCGGAAGAACAGAAAGAAGCTCTTAGACTCGCTTTCGCCTTGGATCCTTATCCCAATGTGGCTACCATCGAATTCCTCGCTAGTGAACTGGCCTTGTCATCGAGAACAATAACAAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACACCTCACGGCCAACCAGAGCCGCAATCGCCGCGAGAACCTGGTCAACCGTTCGATCCTGTTCAATTCAGACTGCTGTTAAACCAAAGACTGCTGGAGATTCAAAAGGAGAGACTGGGTCTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCCAACCTAGCGGCCCTGGTAGGTAATGCATTGAAAGAACAATGCTCTGGTCTGGACCTCTCAATGAATGCTCTAAAGAGAGAGCCCAATCAAGAATTCGAAGACGAAGATGTCGACGATGCGATGAGTAATCTAGGTAGTGAAGACTCGGAAGGTTCGGCCAGTAGTATAAAGAGAGAACCTACAGAAACACCGACGGCACCCACGACAGTCAGGTCCAATAGAAGAAAACCCGCGGCACCACAATGGGTGAATCCGGAATGGCAAGAACCAACGAGAACAGGCGATGAAGTTATCATCAATGGAGTTTGTGTGATGCAGACGGATGATTATGGAGTAAAAAGAGAGGCTGAAGAGACCATAAGAGTTGAACCGACACCAGTGCAAGATCGATATGAAGAAGATGCTCAAAGTGATGTTTCTTCCGTGTCTGGCAACAATGGAGCCGATCGAGATAGTCCGCTTCCCAGTCCAAAATCTGATCAAAACAGTCCAGCGACATCGCTCAGACCACCGTCAGCGCAACAAACGCAACAGTCCACGGAGGAAAGTCCGAAGGACGTGGTGAAACACGAACCGGAAGAAACGTGGGATTACTAA
- Protein Sequence
- MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDNNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNTNLEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTSLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETNTPSVSINGSGLTPGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKGKEQGMPAFARGPQDSGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQSSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSDQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729955;
- 90% Identity
- iTF_00221825;
- 80% Identity
- iTF_00181871;