Acoo006834.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- osa
- Assembly
- GCA_001594045.1
- Location
- NW:5059714-5072519[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-25 1e-21 76.3 0.0 2 89 433 520 432 520 0.92
Sequence Information
- Coding Sequence
- ATGAGACCTACCCCGTCACCAACAGGATCCACAGGTTCTCGCTCGATGTCCCCTGCTGTTGGTCGGTCTTTTTTACGCCAACAAAACGTTCAGATGCCTCCACGTCCGTCGAGTAGCCAGTCGGATAGTAGTGGGCCAGCACCGCGAATGAGTCACTCTCCTATGACCACTCAAGGAGCATACCAGCAACCATTGGGTCCTTCACCACATATGCATAGTTACAAAATGAACAGTACTGGTCCTGGTGTAGTACAACCGGGACCTGGTTCGACAGCTCTCGGTGGGATTAGTCCAATGGGTGGTGGAATGGGCTATGCAGCTGGTGGGACAGCTGCAGGTCAGCCTGGAGGTTATCATGCACAATCTACGTATCCACCTCCTCGTCCTCACATGCAGTTTCCACAAGGATATCCAACGCCTGCGAACTCGCAACCACCACCCAACAATCAGTATCAACCTCCCAACAGACCGAATAACTTAGTACAATATCCACCGTACAcgCATAAAATGGGCTTTAATAGTGTACCTCCGGGAATGCCACCGAGTCCAGGACCGCCGCAAGTTTATGGTGCTGGTAGTGCAACTGCAATGGTACCGCCAGGCGCTCCAGGAGTACCTGTCATTGGTAATATGGGACCGCCAGCGAGCTCGATGGGTCCACCACCACCGTCTCCCAATCACATAAGTAATCAACCACCACCGCCTACCAGCTCGGCAGTACCACATTTACATACGCCGGCAGCTACGCCGCCTCTCAACCATGAGGGTAGCCCGATGCCACCTCCGAGTACAACACCGAATTCACATCCCGCCTCAGCACCAACCCCTACCAGCCACAATTCCGCAGATCTCACAGCTGAGACTTCCAACGACAGCGGTATAACCACGACTGCTTCAGGTACGTCAGCTATAAATGTCATATCTACTTCAAGTGGTACTGTGACATCTGTAATAACAACAGGTCCAGACGGCACGTCTCTGGATGAAGGTTCGCAGCAATCAACGTTATCTAATGCATCAGCTGCCTCTGGTGAAGATCCAGCATTTACACCAAAAGTGCGGAAGGAAATGATAGGAGGATATCACAGTCATCCTGCGACACCACAGAGCACTGTTCCGTCTCCTGGCGCTGCTAGCATTAATTCGATTCATGAGGAATATTCTGATATGAACAGCCCTGGTTGGCCGCGTACTCCTGCTAGTCCTgtATTTAACAGTCATGTGCCTCAAGACCCGTACAGATCTaagAAGACAGATAGTCTGGCAAAATTATACGAAATGGACGAATCGCTAGAACGAAGAAGCTGGCTGGATAAGCTAGTCAACTTCATGGAAGAACGAAGATCACCGATCACCAGCTGTCCTACCATCTCCAAGAACCCCCTCGATCTATTTCGGCTTTACCTCTACGTGAAGGAGAGGGGGGGCTTCATGGAGGTATGCAAGGTGACGAAAAACAAAACGTGGAAGGATATAGCTGGTCTGTTAGGCATTGGTGCCAGCAGTAGCGCTGCTTACACTTTGCGCAAGCATTATACGAAGCATCTGCTAGCATATGAATGTCACTTTGATCGTGGCGGTGTGGATCCGCAACCCATTATCAATCAGGTCGAAGCGGGTTCGAAGAAGAAGGGATCTAAGGGAACTGCTTCCGTACCATCGCCGgGTTCTTCCAATTCTCAAGATTCCTTTCCCGCTGCTGGATCAAGTAACGCTTCTATGGACGGTTATGGAAGCTACCAGGGTAGTTACACAGGCGGTACACCCGGTGGTCCATCGTCAGAGTATACGCCGCCACCACCTAGGCCACCCAGCCAAAGCAGTGCACCCTCCGCCCATCAAggaATACAACAAGGCACTTACCAAAACACAGGCTCTTATCAGAACTATCCTCAAGAACAGTATATACGGCCGCAGGGAAACGCGATGTCTCAACAAGGAGAGTTCAATCAACCGTACTCACCCAGATCGCATTATCCTCCATATGTACCGGATGTCGACAGGGGATATCCGAGTGGTAACATGCCGCCGAACAACGCTACTGGACAGGATATATACAACAGATACACCAGCGGTCAACAAGGTCCCACTAGTTATCCCACGGGAACGCCTCCTAATGCGCGGAGCAATAGCTATCCTTCGGGACCGCAGACTCATCCGGTCACTGTGCAACAGCAAACGGCGACTAGCCAGCCTTCCTCGCCTTCGCAACCGCCAACTGTGTCGTCATACTCGTGTCCGCAAGACTACTATCGACAGGAACAAAGTGCATATGGAGCGCCCGCTGGAACTCAAATATATACCGCAAGCGGATCGGCTAACAAGAACATGCCACCACCCCCTCCAGGTCCCACTCAACCTAGACGCCACCCAGACTTTGCCAAAGACCAACAATATCCCCAATATAATCAACAACGACCAGCGTATCCAGGATGGCCAAATACAACTAATCAATACAATAGTAATAGTGGAAACAATAGGGTTCAATACCCAAGCCAGCCGGCACAACCGCCATCACAACAACCACAACCGCAGCCGCCGCAACAAGGAACTCAAGTTGTCACCGCTGCTCCAACTGCTCCAGCAGTCAACATGGCTAGTAATCAACAATGGGCCAGTCAGCCATCGAATAGGTCCCCATCCCAGCCGTCTATAAACGCTATAGCGCACCCGCCTCCGCCGTGGGATCATCGTTACACGAATCAACCGTCCCCTTTGTATCCAACACCCGGGAATCATCAGACTCAACTCGGAGTAAATCCCATGATCAGCCAACAACCGACGTCAAAGAGAGAAATGACATTCCCTCCTGACAGTGTAGAAGCGATCACGCCTCTTTTGTACAAGCGACGAAAACTGACGCGCGCTGACGTGGCGCCAGTAGAAGCTTGGCGCATCATGATGGCTTTGAGATCGGGTCTGCTCGCTGAAAGCTGCTGGGCCCTTGatgtattaaacattttgttattcgATGACTCTTCTGTAAGTTATTTCGGATTGACACATCTTCCCGGACTACTAGACGTTCTGCTGGAACACTTCTCGCGTTCTCTCTCCGACATGTTCGAATCATGTGTAAACGATGACGATCGCTATTGCCAGGCCGCAGATGGTCCGGAGGTAGACCTCGGTGCGGTAACGCGCCCGATCGATTCGGAAGATCGGACGAAATTGCTGTCGACATCGAATTATACGTATCTCTCGAGGAGAGGTCGCCCCGTTAAGATCGTCCCTCGAGATGATGATCTGTTTGTTTTGGACACCCGGAGGCCTTGGGATCATCAGGAGTGCGAGTCGGAAACCGAGCCGTGGCAAGTCGACACGAACGCGACTAAATACATCGTCACGTGTTTTCAGTCTGAGGTGAGCTCGGTGCCTTTCGCCCGTTTATTAAGGGACGAGAAACCGCCATTGTTGCAGAAGGAAGTTGATAGTACAGATTTGAAAGACGAAGCCAAAGCGGACAGTGTCGGTGGTGTCCATGAGACGTTAGACTTCACTCACAAATCCGGTGAGCTTGGCGACAAGCAATCTAACAAAGACAGTGGCGAACGCAAGCAGCAGCAACAGTTGGACAAGAAAAAGAAGACGAAAACTTTGAGTGACGTGCTGTCGAGGATCAAGAAGGAGCCAGTAGAGATGAACGATCTCACAAGGGAACTGTTCGAGAAGAAGAACGACGGCTTTAAAAAGGATTGCGACAGCGAAATGACGAAAGCAAACAACAATATGGGTGAGCACTTTGGCAGTGATATGTCGAAGAACGACGAGGACTCGTTGCCGACGCAAAATGGACTGAATGAATCAGTAGCGACGGTTTCAGGCAACATTGATAACACCATAGATAAAGCTGAGATCAAGATAGAAACGACAGACGAACATGAATTGCTAATGACGAGAGACGACAGGGAGGGACCAAGATTACAAATAAGAGATCCGGCAGGAACGTTAAAACGACGGAGGATAAGTGATTACGAGGATGAGAGCTACTCCAGGGACGAAGCGAGTCTTTACCTGGTGACGGAAACGCAGGACAACCTGGCCCGTCGTTGCGTGTGCCTGTCAACAATCTTGAGGAATCTCACTTTTATCCCCGGCAATGAAGCGGAATTCGCGAAGAACGTTACGTTCCTCAGTCTATTAGGCAAGTTATTGCTGTTGCATCACGAACACCCGATACGGGCGCAAAAGACTCGCAATTACGATCGTGAAGAAGACGCGGATTTTGCGGACTCGTGTAGCAGTCTACAAGGCGAGGGCGAGTGGTGGTGGGACTTCCTGCATCATGTGAGGGAGAACGTCCTCGTGATGGCCGCCAACATATCCGGCCACATGGATCTGAGCCAGCATCCGGAGGAGATCTCGCGACCAGTGCTTGACGGCCTTCTTCACTGGGCCGTATGCCCGGCTGCGCATGGTCAGGATCCTTTCCCAACGGTCGGTCCGAATTCCTCGTTGTCGCCGCAGAGACTCGCGCTTGAAGCATTGTGCAAATTATGCGTTACCGAGTGCAACGTTGATTTGGTAGTGGCGACGCCGCCGTATTCACGATTACAGAGACTATGCTCGGTGTTGACTAGGCTCCTCTGCCGCAGCGAAGAACAGGTGCTGCGTGAGTTCGGAGTGAATCTACTGCACTTCTTGTCGGCCGCGGACAGCGGCGTCGCGCGCACCATCGCCCTGCAGACGCCGTGCGTTGCGCTGCTCGTTGCATTCATCGAGCAGGCCGAATCAAGTGCAATCGGTGTCGCTAATCAGCACGGTCTTGCGGCTCTGCGCGACAATCCCGAATCGATGGGCACCAGCCTGGATATGTTGCGACGTGCGGCCGGCACGCTGCTCAACCTCGCCAGGCATCCGGATAATCGAACTCTCCTTCTGCAACACGAGTCCCGTCTGCTCGCCTTGGTGATGAGCCAGATTCTGGATCAGCAGGTCGCTGCGATAGTCGCGCGCGTGTTATTCCAGTGTTCGAGGGGCACGTAA
- Protein Sequence
- MRPTPSPTGSTGSRSMSPAVGRSFLRQQNVQMPPRPSSSQSDSSGPAPRMSHSPMTTQGAYQQPLGPSPHMHSYKMNSTGPGVVQPGPGSTALGGISPMGGGMGYAAGGTAAGQPGGYHAQSTYPPPRPHMQFPQGYPTPANSQPPPNNQYQPPNRPNNLVQYPPYTHKMGFNSVPPGMPPSPGPPQVYGAGSATAMVPPGAPGVPVIGNMGPPASSMGPPPPSPNHISNQPPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPASAPTPTSHNSADLTAETSNDSGITTTASGTSAINVISTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPAFTPKVRKEMIGGYHSHPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPASPVFNSHVPQDPYRSKKTDSLAKLYEMDESLERRSWLDKLVNFMEERRSPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQGSYTGGTPGGPSSEYTPPPPRPPSQSSAPSAHQGIQQGTYQNTGSYQNYPQEQYIRPQGNAMSQQGEFNQPYSPRSHYPPYVPDVDRGYPSGNMPPNNATGQDIYNRYTSGQQGPTSYPTGTPPNARSNSYPSGPQTHPVTVQQQTATSQPSSPSQPPTVSSYSCPQDYYRQEQSAYGAPAGTQIYTASGSANKNMPPPPPGPTQPRRHPDFAKDQQYPQYNQQRPAYPGWPNTTNQYNSNSGNNRVQYPSQPAQPPSQQPQPQPPQQGTQVVTAAPTAPAVNMASNQQWASQPSNRSPSQPSINAIAHPPPPWDHRYTNQPSPLYPTPGNHQTQLGVNPMISQQPTSKREMTFPPDSVEAITPLLYKRRKLTRADVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSYFGLTHLPGLLDVLLEHFSRSLSDMFESCVNDDDRYCQAADGPEVDLGAVTRPIDSEDRTKLLSTSNYTYLSRRGRPVKIVPRDDDLFVLDTRRPWDHQECESETEPWQVDTNATKYIVTCFQSEVSSVPFARLLRDEKPPLLQKEVDSTDLKDEAKADSVGGVHETLDFTHKSGELGDKQSNKDSGERKQQQQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKDCDSEMTKANNNMGEHFGSDMSKNDEDSLPTQNGLNESVATVSGNIDNTIDKAEIKIETTDEHELLMTRDDREGPRLQIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTILRNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPIRAQKTRNYDREEDADFADSCSSLQGEGEWWWDFLHHVRENVLVMAANISGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFPTVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAESSAIGVANQHGLAALRDNPESMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01098980;
- 90% Identity
- iTF_01407010;
- 80% Identity
- -