Acoo005489.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atta colombica
Gene Symbol
Arid4b
Assembly
GCA_001594045.1
Location
NW:1276718-1287027[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-28 4.5e-25 87.0 0.1 1 89 308 395 308 395 0.96

Sequence Information

Coding Sequence
ATGCTGGGGGACGATCCACCATCCCTATCGGTGGGTACTGAAGTTAGCGCTAAATATAAGGGTGCCTTTTGCGAAGCAAAAATCCGTAAAGTGGTACGATCGGTGAAATGTCGCATAACTTATAAACCACAAGGTTTGGGAACTGCTACAGTTGCCGACGATCAAATAAGAGGAACTTTAAGAGTAGGTGCTTCCGTTGAAGTCAAACATGTGGATCGAAAAGAACTTGTGGAAGCTACGATTACAAAAATCCAAGACTGCAGTCAATATACTGTGGTCTTTGATGATGGAGATATTACGACATTGAGAAGAACTGCGCTTTGTCTGAAAAGTGGACGGCACTTTGCAGAAAGTGAAACGTTAGATCAACTTCCATTGACTCATCCAGAGCACTTTGGGAATCCTGTAATTGGAGGCAGAAGGGGTAGACGATCAAGGCAAGCACAGGACGAAAGCAGCGAAGATGAAGACAGTCCACCACGAGGTGCTCGTGACTCGGCTTCCAGTGGAGGTGCAAAGGAAGGAATGGAAACTGAACCAGAGATTGGTAGAGTGGTTTGTGTGGAACTCGGtgataaaaagaagaaggatAATTGGTTTCCAGGATTAGTGGTCGCACCTACTGCTCAAGATACTGTAAGAATACGAGTGAGAGATGATTATCTAGTGCGCTCGTTTAAAGATGCCAGATAttatacaGTGCCCAAAAAGGAAGCCACAGAATTCACGAAAGAATTAGTTAATAAAGTTGAAAACAGTACTTTGAAGGTTGCAGTAGAAAAAGCGCTGctatttttagagaaaaatgagTTACCACCTCATTGGGACAGGGATTCCCTGTTTGGGCATTCTGTTTCTAGTGGTAATAGCGATTATGATGGAGAACTTGATTCAGATAGTTCGGACGACGAACCGCGTGAAGAAAAAGATCATTTTGTGGCTCAACTGTATAAATTTATGGATGATCGCGGCACACCTATAAATGTTTGCCCGATGATAGGAAATGAAGATATAGATTTGTATCGGCTTTTCCGAGCGGTTTACAAACTGGGTGGCTATAATCGTGTTACGAATCAGAATCAATGGAAAGCTGTAACACGACGACTTGGTTTTTCGATGCAAAACTCGACATCTTTGTACAATCTTGTGAAACAAGCTTACAAAAAGGTCTTACACTCCTTTGAAGATTTCTATAGAAAATTAGGCTGTACCATGGTGAACCATCCGCGAGGTAGCACGCGTAAACAACGTCCTGGAAGAAGTCTAATCCGTGACAAAGACAGAAATACTCCTATACCACCACCAGCACCAGCGCAAGTGAAAAACGACAAGGATGAAGATGAGAAGAAAGTCATAGaggatgaaaaaaaagagaagaaagaagttAAAAAGGAACAagtgaaagaagaagaaattaaaataaaaaagaaagaagaactTGAGGGAAATGGTAGTGGTCAGGAGAGCGATGTGAACGTGGAAGGAGATACTGAATCATCATccaataatgaaaaatcgcaAAAACCGACCACGCAAATTTCTGCATTATCTCCTACTTCGTGTGGTACTACAACTACATCATCCAGTCGGACCAagtcaaaaaataaagaagacaccAAAAAGAAGGCAACTGAGAAGAAGAAAATCGAACCtaagaaacaagaaaagaaGGATGAAAAAGTCAAGGAGGAAGAAGCCACCAAGACAAGATCCAAGGCAAAAGATGATACTGTGAGAAATAAAGGTGCTTCCGAAGGAAGGGAAACTCGAACACCATCTAGAGAGGCAGATAAGAAAACAGTGTCTAAGCAACGACGTTTAACAGatgaagaattaaagaaaCGAGGAAGGAAACGCAAAGAATGCGAAACGGAAAAGTCACGCACAGATGAACAGCTTACAGAGACCGCCCCTTGCTATAAGGGTCCCGTAGAATGTGGCGATAAATTGATAGTATATTATGGTCCAACACACGAATCTAAAGTTACTTACGAAGCAAAAGTTATCGAAATAGAGAAGGAAGGTCCGGAGCCAATGTATCTTGTACATTACACAGGCTGGAACAACAGATATGACGAGTGGATCAAAGCATCTAGAATCGCTCAAAATATCACGCAGGCTCAAGGTAAAGTAAAGCGCATCAAAGCAACTCCCAGGCCTCAAACTCCCAGCACGAATTCATCCAACAAGTTGAAAGGTGCTTCAAGCGCTAACGCAACTCAAAGTCGTCGCCGAGCGCAAAGCGTCGCTCCTACTTCGACTAGCGCCGTTCAACCAGCTTCAACATTTACAAAGGAAACtaagaaggaagaaaaagacAAGGAAACAATACAACCTAGATCCACTACACCGTTGTCTATCGCTAGTTGTAGCTCCAGAACTAAGAGTCCTGCCACACCCGCCAATAGACCAACCAGGACAACTAGAAATGCAGAGTTATCCGGAATAGAACATCGTAGGCGAACCAGGAGAACTTCAGGACACACGGATATATCTGTCGCATCAGAAAGCGAGGATAGTGAGGGTTATGAATCTGATACCACCGAGCCCGAACAAACCAAAACCAGATTAAGAGAAAAAACGGAAGAAAGAAAACGGAAGGAGCGAAGAACAGAAGAGAGAATTAGAACAGATGATGTCACGGTCAGTGATGCCGAGGACgataaagacaatttggatGAACCACGTAAAGGTAGACGTTTAAGAAGAATGCCCGGTAAATCTCAAGGCATCAAATCTGAACCTGATAGCGACCAAGAGGAGCAACCAAAGGGTCGGGATTTTGATCTTAATCAAATACGATCCGAATTGAAAGGTTTCGACAAAGCTGTTAAGTTAGAGATTAGAATGGAGGCTGAGGACGAAATTAAGCTGGATGAGAAAGAAAACGTGGTCGCGATCACGGTGTCACCCAAGTTAGAGAAAACTATCGAGTCTCCAAAGGTAGAAGTTGTTGAAACAAAAGTGGAAAACACGGAAgacatatatgaatttaaagaaCCGGAGCCGTTCGAGTTTGAGGTAAGAAATAAGAGGGACACCAACAgtgataaagataaattaaagaagaggATGTTCGAAGAGGAGACGAAGAGTCCAAAGAAGAAGCAAAAAACGCCAGTTACAGCATTAGTAGCAAAGGAAACGAAATCAGAACTACCAGAGAACGATTCTCGAAAGAAGCCGAGGAAATTGTTCGGCAAGAGGTCTGACGATACGCACGAAGTGACGACTGCTCCCAACAAATCGACATCACAGGTCGCATCGTGTATATCATGTGAGGACGTTTTCAACAAACTATGTGATTCGTCCACGTTATCATTTAATCAAGTGAAATCGACTATCGCGGAGGAATCTAGTAATAAAGTATCTGGCTTAAATCTTTTGTTTAACGATTTGCCGGCGGACGATGAAGGTACACGTGAAGATTCCGAGGACCGTCTGATAATATCAGAGACCGAGGTATCTGAGACGgaacaagaaaatgtatttacatatcAACAGGAGATTCAGTTCCAAAGCGGCAAATCGCCGGACACTGCGGAATCGAGCAAGAACGAAACGAACACTTTAATCGAAAGCGTGAAAGAAGAAACGCTGATTAATACGAGCACTAGTAATAAATCCGCCAATATCTCAGATCAGAAACAGAGTCAAGTCAAGCCTTTGCCAAGTCAAATCTCAACTGGACAGTCACAAtcagaattgaaaatgttGGATTCCAAGTTGCTCGATATCGTTCCAGTTCCATCGCCGATCATGATACCGCCAGCTCCTATAAGTGCACGACTGCCGGCAACATCTACAATAGAAGAAAAGTTATCGGCCGCGTTGGCATATCGAAGCAAAACTAAAGATACTAAGAAGACTTTGGATGAGGAAAATGACCTGCGCGTAATGAAGACAATGAAGGAAGTGTCTAAGAAATTAGACGCTACTTTTCAAAAAGGTAAAGATGCGGATTGTATGTCAAAGATTAAAGATGATAATGTCGAGGTAGATAAAAAACGCGAACAAGAAAAGATCACGAATGATGAAAATTTCCGCAGAGAGATTATGCGCGTGGTTAATGTACCTAAgcgaaaagaagaagaattatCGAAATCGAAGAAAGAAGCAGATCCGAAAAAGATATCAGAAACGAAAGTAGTCACTGAACACAAGACTAAACTACAAGATACCACGAGAGACGAAAGCTGGAGGAACACCGGATATGAGATGTCTGATAAAAAACCTGAAGAAGAATATAAAGCTACGGatcagaaagagaaagacCGAGAAAGAATTGAGAATCGTAAAAAACAAATCAATCAAGATATTATAGATTCCACAGACAGTAGTGATTCCGAACAAAGGCTCGTAATAGATAACGAAGAACCACAAGACGTCAAAGTACCAACGTCTTTTGATGTAAAGCTACAAGCGGAATTGGATCGCATAGAAAATACGCAAGAGAGATACGCGAGATCACAGGTATTGAAAACTTCACAAACAACCCATCAACAGCAGCAAGAGCAGGAATGTACAGAGTTCAAGACCGATGTAACACCCGTTTTGAAGACAGATGAAGAAGGTGAAACGATGAATTCGCTGCTATGCGAAGAGGAGATACCCGGCTCACCGGCTCCAATGTCCGAGAGCATCGAACAAGCTAATATTGGTCCTTCGTGTAGTTCGCCGAAGAATGAAGTTACGGAAAATAGTATAGTACTGATGGAAATGCCTTTCGCGAGCGCGCCGACCTCAGGTCAAAGTACAACGAGCAGCAGCACCGTTGCTACCCTTAGTATGGCATTGCCGAAGACCGTGGAAGCGTCGATGCCGGTTTCACTGCCAACGCAGCAAAACATATCTTTAAACATGCGACAGTcacaacagcagcaacagcaacaacaTCATCAACATCAATATATGGCTTTAATGCCATCACAACGACGTGAGAGCAACGAAGCCGCGCCAGTGATGGATAATACACCACCGACGACACCCGATTCGAGCATTTCCAACATTTCAGGCTCACCTAGGGAGGAGAGAACCGGTGGTTCATCACCGATGTCCGAAGATAACATCAAGCTCAATCGTGAGAATTCCGAGGTGGATAATGATAGTGCCGGCAAAGGACCGAGCTTCAGCGAAGACGACGCTCTACCTAACTCTGAGAACAACTCCGCGGATAGGATTCCTAAGCCGCCCGCCAAACGTGGAGTCGATGACATGCAGTCACCCAAGAAACGCaagagaaacagaaaacaTTCAGAATGCGGCAGTGGTGGAAGTAGCACCGTCAGCGTTGGTGTCGGTGTTGGTGTCGATGTTGCTGTTGGTGTTGGCGTTGATATTGGCGTAGGCATTGGCGCCAGCACTGGCAGCggtagcagcagcagcagcagtagCAGCAGTAGCAGTAGCAGTGGTGGCGGTGGCGGCAATAGTGGTGGCAGTGGCAATGACAGTGGCAATGGCAGTGGTAGTGGCAGTAGCGGTAACGGTGGCAGCGGCGGCGGGACCATTCCGAAGAAACCCGGCAGACAGAACGGTAGGCATGGTAGATATGGAGCTGGGAGCGACAGCGATGACACTAGTGAGGGATTCAATCTCTGCAGCGTCAACAACACGCCGACGAATCACACGAGCACCATCACCAACGTTCCCGATCTCAATACTTACTCGTCAAGATCACCGAGACCAACaaagtacaatttttatgtcGAATTGGATCCTGAATTGGACGGTAGTCAAAGGATAGCTGTACTACAGCAGAAATTATCCGACTTACGTAAGACATATAATGCCGTGAAGGTTGAACTCGCTACTATAGAAAGACGGCGAAAGAAATTAAGAAGACGAGAACGAGAAgCAATGAAAGCAGCTAAGGCAGAAATGCAACAGGCTTGTTCGTGA
Protein Sequence
MLGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRITYKPQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGARDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFSMQNSTSLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPIPPPAPAQVKNDKDEDEKKVIEDEKKEKKEVKKEQVKEEEIKIKKKEELEGNGSGQESDVNVEGDTESSSNNEKSQKPTTQISALSPTSCGTTTTSSSRTKSKNKEDTKKKATEKKKIEPKKQEKKDEKVKEEEATKTRSKAKDDTVRNKGASEGRETRTPSREADKKTVSKQRRLTDEELKKRGRKRKECETEKSRTDEQLTETAPCYKGPVECGDKLIVYYGPTHESKVTYEAKVIEIEKEGPEPMYLVHYTGWNNRYDEWIKASRIAQNITQAQGKVKRIKATPRPQTPSTNSSNKLKGASSANATQSRRRAQSVAPTSTSAVQPASTFTKETKKEEKDKETIQPRSTTPLSIASCSSRTKSPATPANRPTRTTRNAELSGIEHRRRTRRTSGHTDISVASESEDSEGYESDTTEPEQTKTRLREKTEERKRKERRTEERIRTDDVTVSDAEDDKDNLDEPRKGRRLRRMPGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKLEIRMEAEDEIKLDEKENVVAITVSPKLEKTIESPKVEVVETKVENTEDIYEFKEPEPFEFEVRNKRDTNSDKDKLKKRMFEEETKSPKKKQKTPVTALVAKETKSELPENDSRKKPRKLFGKRSDDTHEVTTAPNKSTSQVASCISCEDVFNKLCDSSTLSFNQVKSTIAEESSNKVSGLNLLFNDLPADDEGTREDSEDRLIISETEVSETEQENVFTYQQEIQFQSGKSPDTAESSKNETNTLIESVKEETLINTSTSNKSANISDQKQSQVKPLPSQISTGQSQSELKMLDSKLLDIVPVPSPIMIPPAPISARLPATSTIEEKLSAALAYRSKTKDTKKTLDEENDLRVMKTMKEVSKKLDATFQKGKDADCMSKIKDDNVEVDKKREQEKITNDENFRREIMRVVNVPKRKEEELSKSKKEADPKKISETKVVTEHKTKLQDTTRDESWRNTGYEMSDKKPEEEYKATDQKEKDRERIENRKKQINQDIIDSTDSSDSEQRLVIDNEEPQDVKVPTSFDVKLQAELDRIENTQERYARSQVLKTSQTTHQQQQEQECTEFKTDVTPVLKTDEEGETMNSLLCEEEIPGSPAPMSESIEQANIGPSCSSPKNEVTENSIVLMEMPFASAPTSGQSTTSSSTVATLSMALPKTVEASMPVSLPTQQNISLNMRQSQQQQQQQHHQHQYMALMPSQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPMSEDNIKLNRENSEVDNDSAGKGPSFSEDDALPNSENNSADRIPKPPAKRGVDDMQSPKKRKRNRKHSECGSGGSSTVSVGVGVGVDVAVGVGVDIGVGIGASTGSGSSSSSSSSSSSSSGGGGGNSGGSGNDSGNGSGSGSSGNGGSGGGTIPKKPGRQNGRHGRYGAGSDSDDTSEGFNLCSVNNTPTNHTSTITNVPDLNTYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLSDLRKTYNAVKVELATIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00128745;
90% Identity
iTF_00417345; iTF_01475970; iTF_00015175; iTF_00014512; iTF_00181105; iTF_01476715; iTF_00182428; iTF_01261652; iTF_00015835;
80% Identity
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