Acoo005595.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- -
- Assembly
- GCA_001594045.1
- Location
- NW:2158708-2159688[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-14 5e-12 44.8 8.2 5 56 268 319 264 321 0.95
Sequence Information
- Coding Sequence
- atgatgatggaaaattattacaaaggaCCTAATGAAAGTCGTTTTGAACATTCGTTTGAGCAAAAAAACAACTCAGACTTTAATATGTTGGTTCTGGATCTATCACGCAAGAAGCACGTGACGTCTACATTATCCGAAGTAATTCAACCCATTGGCTCATCGCAAACTTTGTCTTCAGCAAAGGAGCAAAAATATCAAGAGATACATTTTCTAGATGAAAATACACAGACTCCTATCGCGGGCAGTAGTGCCATGCTATCACCATATTCCGAATCAAACTCACCGAAAGAGATGAAGACTGATTCTATAGACTACCATGAAAATAGTAACCAATTGAAACATACTGTGCCATTAACAAGTACGCATAATATTATTCCAGGAGTAACAATGGTAACACCCGAGCAGCCATCGCTACTTGCATTCCCGAACGAAGCCACAAATATTTCCGtaccaaaaatatatttaccatATATAGAAACACCACAATCTTTTATAACGAATAATGAGATCAGAAGAATCGTTTCAATGCCAGCAGAATGCTCGACGTCGGATATGAAATCATCAACGTCTTCGGAGAAAAAAACGCCAAGACCTTTCAAGGCCTAtccaaacaattttttgactgTTGTTAACACTATTGACCATAATTCGAATGAGAATTATGCAAAATTCCGTCAGATGATActtcaaaacataaaaaaaatgaacaaaaatacatCGAATCCTAAAATGCGTCGAGTATCTAGGTCTATTAGCAGTCCTGGATTGCCTACTAGTACCGTCGATGAGAAAGATGCTATTTATtgggaaagaagaaaaaaaaataatgaagcaGCGAAGCGTTCCAGAGATGCTCGAAGGGCTAAGGAAGACGAACTCGCAATCCGAACGAGTTTCCTCGAATACGAGAATGCGCAACTGAGGATGGAAATACAGAGACTCAAGATGGAAATAGAAAgacaacatatttatatacaataa
- Protein Sequence
- MMMENYYKGPNESRFEHSFEQKNNSDFNMLVLDLSRKKHVTSTLSEVIQPIGSSQTLSSAKEQKYQEIHFLDENTQTPIAGSSAMLSPYSESNSPKEMKTDSIDYHENSNQLKHTVPLTSTHNIIPGVTMVTPEQPSLLAFPNEATNISVPKIYLPYIETPQSFITNNEIRRIVSMPAECSTSDMKSSTSSEKKTPRPFKAYPNNFLTVVNTIDHNSNENYAKFRQMILQNIKKMNKNTSNPKMRRVSRSISSPGLPTSTVDEKDAIYWERRKKNNEAAKRSRDARRAKEDELAIRTSFLEYENAQLRMEIQRLKMEIERQHIYIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01475944;
- 90% Identity
- iTF_00182397;
- 80% Identity
- -