Basic Information

Insect: Atta cephalotes
Gene Symbol: ZNF576
Assembly: GCA_000143395.2
Location: NW:28934-40023[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9e-06 0.00052 19.5 0.5 1 23 144 166 144 166 0.95

2 15 0.0014 0.083 12.6 1.7 3 23 174 194 172 194 0.97

3 15 0.00013 0.0075 15.9 0.0 1 23 332 354 332 354 0.98

4 15 0.49 29 4.6 0.1 1 23 360 383 360 383 0.96

5 15 0.00083 0.048 13.4 1.9 1 23 412 434 412 434 0.98

6 15 0.043 2.5 7.9 0.0 1 23 448 470 448 470 0.92

7 15 0.36 21 5.1 0.3 2 23 478 500 478 500 0.95

8 15 0.0029 0.17 11.7 2.8 2 19 508 525 508 529 0.95

9 15 0.002 0.12 12.1 4.4 3 23 537 557 535 557 0.97

10 15 0.011 0.65 9.8 0.1 3 23 564 584 563 584 0.97

11 15 6.5e-06 0.00038 20.0 0.4 1 23 593 615 593 615 0.98

12 15 0.0028 0.16 11.7 0.2 3 23 623 643 621 643 0.97

13 15 0.0025 0.15 11.8 0.2 3 23 651 671 649 672 0.94

14 15 0.0054 0.31 10.8 0.0 1 23 686 708 686 708 0.93

15 15 0.0093 0.54 10.1 0.0 1 20 1137 1156 1137 1159 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9e-06	0.00052	19.5	0.5	1	23	144	166	144	166	0.95
2	15	0.0014	0.083	12.6	1.7	3	23	174	194	172	194	0.97
3	15	0.00013	0.0075	15.9	0.0	1	23	332	354	332	354	0.98
4	15	0.49	29	4.6	0.1	1	23	360	383	360	383	0.96
5	15	0.00083	0.048	13.4	1.9	1	23	412	434	412	434	0.98
6	15	0.043	2.5	7.9	0.0	1	23	448	470	448	470	0.92
7	15	0.36	21	5.1	0.3	2	23	478	500	478	500	0.95
8	15	0.0029	0.17	11.7	2.8	2	19	508	525	508	529	0.95
9	15	0.002	0.12	12.1	4.4	3	23	537	557	535	557	0.97
10	15	0.011	0.65	9.8	0.1	3	23	564	584	563	584	0.97
11	15	6.5e-06	0.00038	20.0	0.4	1	23	593	615	593	615	0.98
12	15	0.0028	0.16	11.7	0.2	3	23	623	643	621	643	0.97
13	15	0.0025	0.15	11.8	0.2	3	23	651	671	649	672	0.94
14	15	0.0054	0.31	10.8	0.0	1	23	686	708	686	708	0.93
15	15	0.0093	0.54	10.1	0.0	1	20	1137	1156	1137	1159	0.94

Sequence Information

Coding Sequence: ATGGATGTTGCCGGAGATTTGAATCTACAATGGGTAGGAGACGTAGAGCTCCACGAAGAGGTGATATGTGGCCTGGAGGCACAACTGGTCGCATCAGAGGAGGAGGTGATTGGTGCCTGCGAGGAAGTGGCAGTAGAGGAAACCGTCGAATCCGTTCCTGATGTGGTACCTACCACTGAAACTGAGATACTAATGGTACCTCAATCCAATGATATGGAATCAATCTATATAGTGCCACAAGATCAGGGGCATGACTATCTGAATATACAAGTCACTGAAGAAGTAATAGCCGATAACTGGGATAGATCTGGTCCAGATGATGGagTGGAGATTCCAGAGGCCAAAGTGACTAATGAAAATCTCCTGGAGTACGATGACATGGAAATACCATTGCCGATTGATCAGGATTCTTATTCTAATGCTCGGCCGTATCCATGCGACTACTGCAGTCGCAGATTCCGAAAGAAGGCAAATTTGATGAATCACATTGTGGCACATCAGACAGATCGACCGTATGGTTGTAATCTATGTGGATCACGTTATGTACGCAAGTGTGATTTGAATAATCATCTAAAAGTCCATGCATATGCACCATCATCACAAGATGGTCTCGAGGACGACTTGAATGATGAGGACTCGTTAGTTGCGGAAGAGGAAGTGACGACTGGCAACAAAGGCAGACGCAAAAAGATGCAATCAAGTGCACCGCGCAAACGGAAGAACAACACCGCCGCTGGTATGCCGAAACGCAATTTCGAAGAAGTCAAGATAGAGATGGGCAAGTATGTGTATGAACCAGACAATGTTTACAAGGACACATTATTCTACGAGGACGAGCTGACCGACGGTTATTCTGCACGCAGCGGCAATTATGCCTCTAGCTCGAAGTGGCAGATGGAGGAGATGTCTTCTGCTACAGGCAGacaacagcagcaacaacagcagcagcagcagcagcaacagcaatgGCCTATCACTGATCCAACAAAGCCATATGTCTGTCAGACTTGCGGCATTGGCTTTGCTAGAGAGAAGGCATTGGCATCACATGCTCGCATTCATGGTGGCGACAGTCCGTTTGAATGTACTTCATGTGGTGATATGTTCTGGGATATCAACAGTCTGCGAGAACATGTGCGTATCAAGCATGGCGGTACCATTCCCCAAATATCTGATGCAGAGGAATATGAGAATGACGCCACTTACACAGGCGATAACGAAAGGATCGGCGAGTTTTATTGCAACACCTGTGCAGTACCGTTCCATCGTTTGGATTTACTTAAACGTCATCAGaaAATTCACTTGAAGCCAGAGATGGTTACAGTAGAGTCCAGTCAGCATCATATGTGCAATGTTTGTGGAGAAGAGTTTGAGGAGGCTCTAGCACTATTGGCACATGCGGAACTTCATGCTTCAAGatctCCTAGTCGTCGTTGTCTATTATGTGGAGCAAGATGTCGTGATGAAGCAGAAGTCGCGGAGCATGTGCGACAGAATCATGCTGATGATGCACCGCCAAATACATGTACATTGTGTGGAAAGACGTGCAAAGACAAACGCAGTTTATTGAAACATTCATGGATACATAACGTCGATAAGACCTTTGGTTGTACAAAGTGCACAAAACGCTTCCACAGTAAAGCCCGATTACGAAGACATATGGTATCACATCGCAACAAAATGGTGGCATGTGACGAATGCGGTGAGGAATTTCCTGATGGACGCGCTCTCGTAAGTCACCGTCATTCACATAATAGGGAATTAGGCGGCCGTTCTTTCCCTTGTCGTGAGTGCGGAAAAACCTTTGGTAGTCGCAGTTCACAGCAGATTCATATACGTATCCACACCGGCGAGAGGCCCTATGGTTGTCGATTCTGTTGGAAAGCTTTTGCAGACGGCGGTACCTTGAGGAAACATGAGCGCATCCATACTGGCGAGAAACCGTATGGATGTGCGATTTGTCCTCGGGCATTTAATCAAAGAgTGGTTCTCCGAGAGCACGTGCGTGCTCATCATTCCGGTCCGGATCCAAAATGCGTGGGCAGTGCAGAACCATATTTGTGCAAGGTATGTGGCGATTCATTCAGCACTTCCGAAGAGGTAGTGGCACATATAGTGCAGCATTGCGATGATAATACTGCGTTGAAACGCCAGCCACAGACTGGACCGCGCAAGTATAAAAGAAGACGCAAAGCAAAGCCTCTTGAGACAAATACAATGGTACGTAGAAATGAGTTCACGTACGATATGATAGAAAGTAGCGGTGTTACCGGTACTGGTAGTGGTAATATTGGCAGTGGTGGTGGCGGTGGTACTGGCACTGGCGGTTCTGATTCGGAAGACAACACGAAGCGGAAACTTGGCAAAAAGAACAAGCAACATCGATCGAACGTCGAGGAAGGCTATCagaatgtattaaaaagttttgaaagcTCTCTACAGAATATAAACTCTATTGTGAGTAACTCCAAGTTAAATGCATCCAAATCGAAGGTCTCAAAGAAGAAGTTGCGCAAAGAGGAAAAGAAGCAGGAAACGCAAACATCGAATCAGTCAGGCCGGCCGAAGATGATACACACACAGAAGACGCGGGTGCCCGTAGAAGTGGGTAGCGATGGCGCGAAAAAAGGCCAAAAGACAAAGACGATGGTGACCCGGACGCCAAAGGTGATGCCGAATGAGCACAAGTCTGGCATTTTTCCGGGTGGCGAGCGGAATCGGCCACGCACAAAGAATGTCAGTTATCACATTGAGGGTAAATCGCAGCTCATACCGGCAACGTTCTCGACGAAATCAAAGGAGAGTATGTCTACGATGTCGACACAGCAGTTACTGGCAAACATCAAGCAGGAGCCAGGCATGCAAAAGGCCACAGGTGACAGTCACAGGAATAACAATGGTAATATTCTAACTCTTAGTAAAATTCAGGAATCATCAAACAAGAAAAAGTCAATTACTACTAAGAGGACCAAGAGGCAGAAGCACCCAATAAAGCAGGAATTGAACACGTTGATAGTAACAGAAGaacaacaacagcaacaagagcagcaacagcagcaacaacatCAGCAGCAACAGTTACaattacgtaataataataataataataataataataataataataacaatgtcaTGGAGATCAGTGACGATCAGATACAACTGATGGAGCATGCAGTGGATGGTAGCAATCTGGAAGTAGCTTTTGAGGCGAGTGTCGTTACTGCTCAAGAAGACGAGGAGAGTATATTACCACACAGCACCATGCATGAGATGGATAACGGGACAAGAGATAACGTTAAGCTTAGTGTCAAAGTGGAGTCTGCGCCGCCGAGGATGCTCGCTATACATAGTGTTATTGCGTCGGTAGACGATGTCCCAGAAACGATAATACCGGACAGGGTAGAGTATACGTGCGAGATGTGTGCCGCGGTGTTTTCCAGCCGTGCCGAATTATTGGTGCACGTGCCGATAcacatttga
Protein Sequence: MDVAGDLNLQWVGDVELHEEVICGLEAQLVASEEEVIGACEEVAVEETVESVPDVVPTTETEILMVPQSNDMESIYIVPQDQGHDYLNIQVTEEVIADNWDRSGPDDGVEIPEAKVTNENLLEYDDMEIPLPIDQDSYSNARPYPCDYCSRRFRKKANLMNHIVAHQTDRPYGCNLCGSRYVRKCDLNNHLKVHAYAPSSQDGLEDDLNDEDSLVAEEEVTTGNKGRRKKMQSSAPRKRKNNTAAGMPKRNFEEVKIEMGKYVYEPDNVYKDTLFYEDELTDGYSARSGNYASSSKWQMEEMSSATGRQQQQQQQQQQQQQQWPITDPTKPYVCQTCGIGFAREKALASHARIHGGDSPFECTSCGDMFWDINSLREHVRIKHGGTIPQISDAEEYENDATYTGDNERIGEFYCNTCAVPFHRLDLLKRHQKIHLKPEMVTVESSQHHMCNVCGEEFEEALALLAHAELHASRSPSRRCLLCGARCRDEAEVAEHVRQNHADDAPPNTCTLCGKTCKDKRSLLKHSWIHNVDKTFGCTKCTKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNRELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCVGSAEPYLCKVCGDSFSTSEEVVAHIVQHCDDNTALKRQPQTGPRKYKRRRKAKPLETNTMVRRNEFTYDMIESSGVTGTGSGNIGSGGGGGTGTGGSDSEDNTKRKLGKKNKQHRSNVEEGYQNVLKSFESSLQNINSIVSNSKLNASKSKVSKKKLRKEEKKQETQTSNQSGRPKMIHTQKTRVPVEVGSDGAKKGQKTKTMVTRTPKVMPNEHKSGIFPGGERNRPRTKNVSYHIEGKSQLIPATFSTKSKESMSTMSTQQLLANIKQEPGMQKATGDSHRNNNGNILTLSKIQESSNKKKSITTKRTKRQKHPIKQELNTLIVTEEQQQQQEQQQQQQHQQQQLQLRNNNNNNNNNNNNNNVMEISDDQIQLMEHAVDGSNLEVAFEASVVTAQEDEESILPHSTMHEMDNGTRDNVKLSVKVESAPPRMLAIHSVIASVDDVPETIIPDRVEYTCEMCAAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730239;
90% Identity: iTF_01477086;
80% Identity: -