Acep001060.1
Basic Information
- Insect
- Atta cephalotes
- Gene Symbol
- ZFY
- Assembly
- GCA_000143395.2
- Location
- NW:226005-234146[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.21 12 5.8 0.3 1 17 125 141 125 148 0.80 2 27 0.061 3.5 7.5 4.1 1 23 157 180 157 180 0.97 3 27 0.23 13 5.7 1.1 1 23 195 218 195 218 0.94 4 27 5.7e-05 0.0033 17.0 3.3 1 23 224 247 224 247 0.95 5 27 0.0017 0.098 12.4 1.2 2 23 253 275 252 275 0.94 6 27 0.00025 0.015 15.0 0.4 1 23 280 303 280 303 0.94 7 27 2.6e-07 1.5e-05 24.4 3.1 1 23 309 331 309 331 0.99 8 27 5.7e-06 0.00033 20.2 1.0 1 23 337 359 337 359 0.97 9 27 0.012 0.67 9.8 2.1 1 20 365 384 365 387 0.87 10 27 2.4e-05 0.0014 18.2 2.2 1 23 451 473 451 473 0.98 11 27 0.3 17 5.3 1.0 2 23 503 525 502 525 0.91 12 27 2.9e-05 0.0017 18.0 0.8 1 23 541 564 541 564 0.95 13 27 3e-06 0.00018 21.0 1.7 1 23 570 593 570 593 0.97 14 27 0.00082 0.048 13.4 4.8 2 23 599 621 598 621 0.95 15 27 0.00022 0.013 15.2 1.0 1 23 626 649 626 649 0.98 16 27 6.2e-07 3.6e-05 23.2 0.8 2 23 656 677 655 677 0.97 17 27 4.8e-06 0.00028 20.4 0.9 1 23 683 705 683 705 0.97 18 27 0.00014 0.0081 15.8 0.5 1 23 711 733 711 733 0.96 19 27 0.059 3.4 7.5 0.3 2 23 947 969 946 969 0.91 20 27 0.045 2.6 7.9 0.4 1 23 981 1004 981 1004 0.95 21 27 0.2 12 5.9 5.2 1 23 1018 1041 1018 1041 0.94 22 27 0.00026 0.015 15.0 6.3 1 23 1047 1069 1047 1070 0.95 23 27 0.071 4.1 7.3 0.4 2 23 1076 1098 1075 1098 0.95 24 27 0.0023 0.13 12.0 1.2 1 23 1103 1126 1103 1126 0.97 25 27 7.8e-07 4.5e-05 22.9 0.5 2 23 1133 1154 1132 1154 0.96 26 27 1e-05 0.00059 19.4 1.4 1 23 1160 1182 1160 1182 0.97 27 27 4.4e-05 0.0025 17.4 1.0 1 23 1188 1210 1188 1210 0.98
Sequence Information
- Coding Sequence
- atggataatatttatcaagatcAAGGCTATTGGAggGTCATAAATGGAAATGGATGTTTTCTATATGGCAAAGAATCTATTCCAATGCAACTGTGGAAAGTAGTTGATTTAGAAGGATGTCTCTGTTATGCCTTTCTTCCAGTAAATCACATATCaaaaaaaacagaagaaaATCAATACAATCAGAAACAGattgttgaaatattgaaaatcgaGACTGATAATATGGTAGAAATTACAGATGATAACAGTGTAATTTATACAGACGTATCGAACGATGTCtatacagtaaataaaaacaaaaaaatcttgtcgGCAGACGAGTTAGATTCGGATGAAGATCAACTTAACAATAAGAAGGAGACCAAGGTTTATACTTGTGATAAGTGCAATATTTCCTTTCCCATGATGAAGATGTTAAAGTTTCATTGGGATCTAATGCACAAACaagataaagatattattacgTTCACCTGCAGTTTCTGTACCTTTGAAAGTACCAACAAATCGACCTTTTATTCGCATATTAATAGGAAACATTCCACGAATCGTGTAATTAAACGAAGAAAAAAGCCGCAGGAATACTTGTGTAACTTTTGCGGATTTGAATCTCCAAACCGACGACGGTTAAAAGAACACCTCGATCGTAAACACGGATCCGAGTATAAGTATGACTGTGAGCATTGCggcaaaaaattcaaagtgaaaAGCGATATGAGATTGCATGTACGTTTCAAGCACATGGAGGACCCAGTAGTATGCGATATCTGCAATAAGACCTGCTCCAATACTAATTCACTGTATGTGCACAAAAAGTGGGCGCATTTCAAGCCcaaatataaatgtgaaatctGCAATAGGCGTTTGGTCACGCAGGAGAATTTAGATCAACATATCTTTCTACAGCACGAGTCCAGAAAGAGTTTCACGTGCGAAGAGTGCGGTAAATCTTTCAATGACAATCATCGATTGAAACAGCATATGATGACCCACACCGGTGACCGACCGTATGACTGTCATATCTGTGGCAAAGCTTTTGCGCGTAGAACTGCTTACAGACAGCATCTGTTACTTCATACGGGAAAACGACCGtatatttgtgatatttgTGGGAAAGCCTTCGCGCAAAAACCTGGATTAATATGTCATCGAAAATGTCATCCTGGAGAGCATCCTCCTTTACCAGTGGTGCACATCGATCACATTCTTAacgattttatgaaaaaGAAACCGACAGCGGATAGTTTTGCCAGCGAAGCGGAGACGAATAAAACTGGAGCAAAAACATCGACTTTTGCATGTAAACAAGAAAAGAAGTCACAGAAGGgttatgaagaaaaatgcaATTCGTTCGTCTGCAATATCTGTCTTAAATACTTCAAGAGCAAGTACTTACTGAAACGTCATGAACTCACGCACACGACGGAGATTATGCGCGGATGTGAAACGGACGTGAAAGAAAATTCTACATTCACTGATGAGGTGCCGCAAAAGCAAGCACCTCTCCCATGCGTAACGTGCGATTTTCGCTGCAATAAGAGATCCACGATGATCGCGCATCTTGCCGAGAAACACGACGGAATCGCAAACAATGACAGATTCGCCGGTGACAAGCGCGAGTTTACCTGCGTCGTCTGCGGTTTGGTGTTCACCCGCAAAGAGAGCCTGAGGTCGCATTTCATCCGTAAACATACTCAACATTATGCTTACTCGTGTGAGCATTGTGGCAAGGGGTTCAAAGTTAAGGGTGACCTCACCACCCATACCCGGTTGAATCATCAGGAGTCACCGGTGGTGTGTGGTGTCTGCGGCAAAACCTGTCGAAATAGCCACAGTCTATACACTCATCAGAAACATGCGCATTACAAGGCAAAATATGAATGTCCGTTGTGCCATCGACGGCTCGTAACACAACAAAATCTGGATCAGCACTTGCTGACGCAGCATGAGAGGAAGGAAAAGTCGGTGTGTGAGCAATGCGGCAAGACCTTCTTCGAAAATTACGATTTGAGGAAGCACATGAGAATTCATACGGGCGACAAACCGTATAGCTGCACAGTCTGCGGCAGAGCGTTTGCCAGGCACAGCAGCCTGAGCCAGCACCTCCTTCTGCATACCGGCGAGCGTATCTACGCCTGCGATGTATGCGGCAAGACGTTTGCTCAAAAGGCCGGTCTTATCTGTCACAGGAAAATTCACTCGGGCGATCTGCCGCCCTTACCGGTGATACACCAAGGCGCGTATAATTCTCGTGGCATTTTCATCTTTGGTAATGAATCACTGGTGATGAAGACGTGGCAAATTTTGGAATTTGATGGCAAACCGTATTATGCGTTTGTTCCTGAAGGCGATGTGCCTTTACCGGACGAAGATATACTAGATCAAGTAGAATCATTAGAGGAGGaagtagaaataataaaaaatgggaATATTGGTATAGATAATGTAAAACGGAATTACTCGGAGGAGGAATACGTTTGTACGGAAGAGAAATCATACAATGTTGAGAGCATTCTTAACGAAAATGTTGAGGAAATAGAGGAATTGGATATAAAACCGATCATACTAAACGGCATCAGTGAAGCTGTGGATGGCAAAACAGCTGGAGATTTATATCAGGTGAAAGTAGAGGGTAGTATGGTGACTATCGAGAAACTTGCGTCCAATACAGAGACAGATGGGAAAACAACCGAAGATCAGATGGAGGATATAAATGATGATGAGGGAGAAATAGAATATCTTGAGGAAGCAATGCTAGATGTACCTAGCATTGCTCCCTCCCCTAGCAATAAAGCATCGCGTATGAAAACACCTGCCAAGAATTCCAGTGAAGCTATGAAGTGCAAATTGTGCTCGGAGACATTTGATACGATTTTAGCCTTTAGAAAACACGTAGCATGGAGTCATAAAAAGAAGATGTGCATAATAGAAAACGATGCTTATATATGCGCTGTGTGCGGCTTTAAAACTCAGAAGAAGAGTTTGTTTGCCGCTCATCTGGATAGGAAGCATGAAACTTGGAAGTCCCGAAGACGGTCTACCAATACTAAATTTCCTTGTAGTGCTTGCGGTTTTATTTGCAGATCGAAGCATTCCTTGCAGTCTCACTTTACGAGGAAACATACGGACAAGTACGAGCATCAGTGCAGTTTCTGCTCAAAAAAGTTTAAGGTCAAGGGGGATCTAACGAATCATATACGATTTCATCATAAAGAGAAGCCGGTCAAGTGCGACGTATGTGGTAAACTGTGCCTTAATTCCGGTTCGCTTTACGTCCATCAAAAGTGGGCACACTACAAACCTCAATACGAGTGTCATATCTGTAAAAGACGTATGGTAACACAAGAAAATCTGGATCAACATTTGGTGACACAGCACGAAAAACGCGACAAGATAGTCTGCGCGGAATGTGGTAAAACTTTTACAAAGAAAGATTCATTCAAGAGACACATGGTGGTACATACAGGATGCAAACCGCATTCCTGTATGATCTGTAGCAAACCCTTCGCACGAAGATCCCAGTTGCGTCAGCATCTGCTTATTCATACCGGCAAGCGTCCATTTGTATGTGACATATGTGGCAAAGCATTCACGCAAAAGCCAGGCTTGATCTGCCACAGAAAAACTCATCCTGGCCAGCATCCGCCATTACCCGTGATGCCAATCGCagattttgttaaagaatTCACTGATGGATATGTACAGGAAATGAACGCGCCAGAGAACGAAGAGGAGATCAATGAGGAAGAAGTATTGAACATTTAA
- Protein Sequence
- MDNIYQDQGYWRVINGNGCFLYGKESIPMQLWKVVDLEGCLCYAFLPVNHISKKTEENQYNQKQIVEILKIETDNMVEITDDNSVIYTDVSNDVYTVNKNKKILSADELDSDEDQLNNKKETKVYTCDKCNISFPMMKMLKFHWDLMHKQDKDIITFTCSFCTFESTNKSTFYSHINRKHSTNRVIKRRKKPQEYLCNFCGFESPNRRRLKEHLDRKHGSEYKYDCEHCGKKFKVKSDMRLHVRFKHMEDPVVCDICNKTCSNTNSLYVHKKWAHFKPKYKCEICNRRLVTQENLDQHIFLQHESRKSFTCEECGKSFNDNHRLKQHMMTHTGDRPYDCHICGKAFARRTAYRQHLLLHTGKRPYICDICGKAFAQKPGLICHRKCHPGEHPPLPVVHIDHILNDFMKKKPTADSFASEAETNKTGAKTSTFACKQEKKSQKGYEEKCNSFVCNICLKYFKSKYLLKRHELTHTTEIMRGCETDVKENSTFTDEVPQKQAPLPCVTCDFRCNKRSTMIAHLAEKHDGIANNDRFAGDKREFTCVVCGLVFTRKESLRSHFIRKHTQHYAYSCEHCGKGFKVKGDLTTHTRLNHQESPVVCGVCGKTCRNSHSLYTHQKHAHYKAKYECPLCHRRLVTQQNLDQHLLTQHERKEKSVCEQCGKTFFENYDLRKHMRIHTGDKPYSCTVCGRAFARHSSLSQHLLLHTGERIYACDVCGKTFAQKAGLICHRKIHSGDLPPLPVIHQGAYNSRGIFIFGNESLVMKTWQILEFDGKPYYAFVPEGDVPLPDEDILDQVESLEEEVEIIKNGNIGIDNVKRNYSEEEYVCTEEKSYNVESILNENVEEIEELDIKPIILNGISEAVDGKTAGDLYQVKVEGSMVTIEKLASNTETDGKTTEDQMEDINDDEGEIEYLEEAMLDVPSIAPSPSNKASRMKTPAKNSSEAMKCKLCSETFDTILAFRKHVAWSHKKKMCIIENDAYICAVCGFKTQKKSLFAAHLDRKHETWKSRRRSTNTKFPCSACGFICRSKHSLQSHFTRKHTDKYEHQCSFCSKKFKVKGDLTNHIRFHHKEKPVKCDVCGKLCLNSGSLYVHQKWAHYKPQYECHICKRRMVTQENLDQHLVTQHEKRDKIVCAECGKTFTKKDSFKRHMVVHTGCKPHSCMICSKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGQHPPLPVMPIADFVKEFTDGYVQEMNAPENEEEINEEEVLNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -