Acep007974.1
Basic Information
- Insect
- Atta cephalotes
- Gene Symbol
- -
- Assembly
- GCA_000143395.2
- Location
- NW:921161-932806[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.013 11 5.3 2.3 3 43 46 90 44 91 0.82 2 9 1.2e-06 0.001 18.3 0.4 3 44 108 146 106 146 0.94 3 9 0.015 13 5.1 3.2 11 41 169 202 164 208 0.84 4 9 0.014 11 5.3 1.1 4 43 269 311 267 312 0.78 5 9 6.3e-07 0.00053 19.2 0.2 2 44 328 367 327 367 0.94 6 9 0.18 1.5e+02 1.7 0.4 5 38 385 417 383 418 0.77 7 9 0.0036 3 7.1 7.7 3 44 492 536 490 536 0.92 8 9 5.6e-07 0.00048 19.3 2.2 2 44 552 591 551 591 0.92 9 9 0.06 51 3.2 0.7 5 41 609 647 607 652 0.85
Sequence Information
- Coding Sequence
- atgGCATGGTACAATTCCTTGGTTACAATCATGGAAGTACATGTTGATACGTTCTTGGAAACCAAGATGGTCAAAGTAACACATCACGGACACTGTGCGGATACAATGGCAGCTCTAGAAGGATCAGACAATTGGATGTGGAAACATgttgttaaattaaacaattttactgTACAGTGCAAGATAgataattgtgataaaatttataagactgataaaaatgaaaatagagtgataataatgataaaaggaCATTTATATCATCAGCATGAAAAATACGATGAAGAAGATCGGTTAAAATGGGAAAACGACAATGACTTTATATGGcgatattttgacaaaataggtttatatgaagaaaaatgtaaattttgtcaCGAATCATTTTCCATATCATATACACCATTGTTAAGGATTCATCTGCGACAATACCATCGTCAAAAAATAAGAGCTGGTATACGAAAAGAAATTGCAACTAAGTCACTATCGCAAcgttttaaaatcaataagaaaaaactTAGTGCACGATGCAAACGTTGCAATCTTAAAATGGACATACTATACGGAACAGATGCTTTAATACATcacatttgttttaaaaagaatcaacATTTAAGGTCTCGACAAAAATCTGAAGATACTAACGTGAACAGAATGACACAACCTATAACCgatgaaaatacaaattcaagTTCCCAccatgataatttaaatagacaaGCTTTTGGATATCGAGAAACGCAACAAAGTAACACATACTGTGCGGATACAATGGCAGCTTTAAAAGGATCAGACAATTGGATGTGGAAATATgttgttaaattaaacaatggTGTACAGTGCAAGATAgataattgtgataaaatttataagattgataaaactaaaaatagagtgataataatgataaaaggaCATTTATACCATCAGCATGGAAAATTCGATGAAGAAGATCGATTAAAATGGGAAAATGACAATGATTTAATATGGCGATATTTCGACAAAGTAggtttatataaagaaaaatgtaaattttgtcaCGACTTACTTTCCGTATCATATACACCATTGTTAAGGGTTCATCTGCGACAATATCAtcgtcaaaaaataaaagctgaTGTACGAAAAGAAATTGCGGATAAGTCTCTAACgcaatatttcgaaattcaCGAGGAAAAATTTAGTGGACGGTGCAAACGTTGCAATGTTGAAAAGGACATATTTTACGGAGCAGATAACTTAATACATCACACTTGTTTCAAAAAGAATCAATCTTTAAGATCTCGACAAGAATCTGATGATAATGATATGAACAGAATGACACAACAACCTATAGCCgatgaaaatacaaattcaagTTCCcacaatgataatttaaatagacaaGCTCTTGGAAATCCAGAAGCTCAACAAAGTAACACATCACAATACTGTGCGGACGCAATGGCAGCTCTAGAAGAATCAGATAATTGGGTGTGGAAACACTTCGTTAAATTAAACAGTTCTACTGTACAGTGCAATATAGATTGTTGTGATCAAACTTATTGTAACAGAAAtccaattaaaatgataaacttGATAAAGACACATTTATACCATAAGCACAAAATATGGACTGAAGAAGATCGTTTAAAATGGGAAAATAACAATGACTTAGTATGGCAATACTTCGACAAAGTAGACTTATACAaaggaaaatgtaaattttgtaagaaTATTCATCATGAAGCATACATACCATATCTAAAGTGGCATCTGCGAAAAAAGCATAGTCAAGAAATAAGAGCTATTGCacaaaaagaaattgcaaCTAAGTCATTatcgcaatattttaaaatcgatgAGAAAGAACCTACTGCGTGGTGCAAACGTTGTTATCTTAAAATGGACATACTTTATGGAACAGATGCCTTAATACATCacatttgtttcaaaaaaaatcaacatttaAGATCTCGACAAAACTCTGAAGATAATAACGTGAACAGAATGACACAACAGTCTATAACCACTGAAAATGCAAATACAAGCTCCCATCATGACGATATAAATAGGCAAATTCCACGAAATCAATACTATCAACAAAGgtaa
- Protein Sequence
- MAWYNSLVTIMEVHVDTFLETKMVKVTHHGHCADTMAALEGSDNWMWKHVVKLNNFTVQCKIDNCDKIYKTDKNENRVIIMIKGHLYHQHEKYDEEDRLKWENDNDFIWRYFDKIGLYEEKCKFCHESFSISYTPLLRIHLRQYHRQKIRAGIRKEIATKSLSQRFKINKKKLSARCKRCNLKMDILYGTDALIHHICFKKNQHLRSRQKSEDTNVNRMTQPITDENTNSSSHHDNLNRQAFGYRETQQSNTYCADTMAALKGSDNWMWKYVVKLNNGVQCKIDNCDKIYKIDKTKNRVIIMIKGHLYHQHGKFDEEDRLKWENDNDLIWRYFDKVGLYKEKCKFCHDLLSVSYTPLLRVHLRQYHRQKIKADVRKEIADKSLTQYFEIHEEKFSGRCKRCNVEKDIFYGADNLIHHTCFKKNQSLRSRQESDDNDMNRMTQQPIADENTNSSSHNDNLNRQALGNPEAQQSNTSQYCADAMAALEESDNWVWKHFVKLNSSTVQCNIDCCDQTYCNRNPIKMINLIKTHLYHKHKIWTEEDRLKWENNNDLVWQYFDKVDLYKGKCKFCKNIHHEAYIPYLKWHLRKKHSQEIRAIAQKEIATKSLSQYFKIDEKEPTAWCKRCYLKMDILYGTDALIHHICFKKNQHLRSRQNSEDNNVNRMTQQSITTENANTSSHHDDINRQIPRNQYYQQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -