Basic Information

Insect: Atta cephalotes
Gene Symbol: -
Assembly: GCA_000143395.2
Location: NW:933045-937433[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.18 1.5e+02 1.7 2.7 6 43 19 60 14 61 0.76

2 12 0.00022 0.18 11.0 1.0 2 43 77 115 76 116 0.83

3 12 0.00066 0.55 9.5 1.0 6 39 135 167 131 174 0.80

4 12 6.3e-05 0.053 12.7 5.6 3 43 215 262 213 263 0.95

5 12 2.9e-07 0.00025 20.2 2.8 2 44 279 318 278 318 0.90

6 12 0.0046 3.9 6.8 4.2 5 39 335 369 332 380 0.89

7 12 0.0067 5.6 6.3 8.9 3 44 443 487 441 487 0.89

8 12 1.2e-06 0.00099 18.3 1.2 2 44 503 542 502 542 0.94

9 12 0.018 15 4.9 4.0 10 39 564 593 560 604 0.87

10 12 0.0093 7.8 5.8 1.9 6 43 667 711 662 712 0.79

11 12 8.5e-07 0.00071 18.7 2.2 2 44 728 767 727 767 0.93

12 12 0.029 24 4.2 0.0 5 23 785 802 783 816 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.18	1.5e+02	1.7	2.7	6	43	19	60	14	61	0.76
2	12	0.00022	0.18	11.0	1.0	2	43	77	115	76	116	0.83
3	12	0.00066	0.55	9.5	1.0	6	39	135	167	131	174	0.80
4	12	6.3e-05	0.053	12.7	5.6	3	43	215	262	213	263	0.95
5	12	2.9e-07	0.00025	20.2	2.8	2	44	279	318	278	318	0.90
6	12	0.0046	3.9	6.8	4.2	5	39	335	369	332	380	0.89
7	12	0.0067	5.6	6.3	8.9	3	44	443	487	441	487	0.89
8	12	1.2e-06	0.00099	18.3	1.2	2	44	503	542	502	542	0.94
9	12	0.018	15	4.9	4.0	10	39	564	593	560	604	0.87
10	12	0.0093	7.8	5.8	1.9	6	43	667	711	662	712	0.79
11	12	8.5e-07	0.00071	18.7	2.2	2	44	728	767	727	767	0.93
12	12	0.029	24	4.2	0.0	5	23	785	802	783	816	0.83

Sequence Information

Coding Sequence: ATGtatcaaGATATAACGGCAGCTCTAGAAGGATCAAACAATTGGGTGCGGAAAcatattcttaaattgaaCAGTTTTACTGTACAGTGCAATATAGATGGttgttataaaacttatacaaCTGATAATAAACATGCAAGAATGATAGCAATGGTAAAGGgacatttatatcataaacaCGAAATATGGAACGAAGAAGATCGCTTAAAATGGGAAAACGACAATGACTTGATATGGCGGTACTtcgataaagtaaaattatatgaagaaaaatgtaaattttgtaacattttacttCATCAAGCACATATTCCACTTATAAAGTCGCATCTGCGAATAAAGCACAGTCAAGAAATAAGAACTATtgtacaaaaagaaattgtagaTAAGTCTTTAtcgcaatattataaaatagatgaaaaagaatttagcGCATTGTGTAAACATTGCAATGTCAAAAAGGACATATTTTATGGAACAGATGCCTTAATACACCACATTTGTTTCAAAAAGAATCAATCTTTAAGACTTCGACAAGAActtgatgataatgatgatcctggaaatgaagaaaatgaaCAAAGTAACACATCACGATACTGTGCGGATGCAATGGCAGCTCTAGAAGAATCAGATAGTTGGGTGTGGAAACATgttgttaaattaaacaattttactgTACAGTGCAATATAGATAGTTGTGatcaaatttataagtatacaaTTGATCATAAACATACAAATAGAATGATAACAAGGTTAAAGGGACATTTATACCATAAGCATGAAATATGGACTGAAGAAGATCGCTTAAAATGGGAAAACAACAATGACTCGATATGGcaatattttgacaaaatagaCTTATACAAAGAAAGATGTAAATTTTGTAAGTATTTTCGTCATGAAGCATATATACACAATCTAAAGTTGCATCTACGAAAAAAGCATAGTCAAGAAATAAGTGCTGCTGCacaaaaagaaattgcaaCTAGGTCACTATcgcattgttttaaaattgatgagGAAGAACTTATTGCATGGTGCAAACGTTGCAATCATAAAATGGACATACTTCACGGAACAGATGCCTTAATGCATCACATTTGTTTCAAAAAGAATCAACGTTTAAAGTCTCGgcaaaaatctgaaaataataatgtaaatagaaTGACACAACAGTCTACAATCACTGAAAATGCAAATACAAATTCCCATCATGATGATATAAATAGACAAGTTCctcaaaatcaagattttcGACAaagTAATACATCACAATACTGTGCGGATGCAATGGCAGCTCTAGAAGGATCAGACAATTGGGTGTGGAAACATgttgttaaattaaacaattttactgTACAGTGCAATATAGATTGTTGTGTtcaaacttattataataaaaatacaagtaGATTGATAACATCGATGAGGGTACATTTATGCCATAAGCACAAAATATGGACTAAAGAAGATCGTTTAGAATGGGAAAACAACAACGATTTGATATGGCAATATTTTGACAAAGTAGACTTATACAaaggaaaatgtaaattttgtagGAGTATTTGTCATGAAGCATATATACCAAATCTAAAATCGCATGTGCTAAAAAAACATAGTCAAAGAATAAGAGCTGctgcacaaaaaaaaattgcaacaaagTCACTATCGCAATGTTTTAAAATCGATGAGAAAGAACTTAGTGTATGGTGTAAATGTTGCAATCATaaaatggacatattttatggAACAGATACCTTAATACAtcatatttgtttcaaaaagaATCAACGTTTAAAGTCTCGACAAAAATCTGAAGAtaataacgtaaataaaatgacacaacAGTCTATAGTCActgaaaatacaaatacaagcTCCCATCATGATGATATAAATAGACAAGCTCCTCAAAATCAAGATCTGCAACAAAGtgACACATATTGTACGGATGTAATGGCTCTAGAAGGATCAAACAATTGGGTGCGGAaacatattcttaaattagaCAATTCTACTGTACAGTGCAATATAGATGGTTGTGACCAAACTTATAAGTATACAATTGATCATAAACGTACAAGTAGAATGATAACAAGGATAAAGggacatttatataataagcacGAAATATGGACTGAAGAAGATCGCTTAAAATGGGAAAACAATAATGACTTGATATGGCAATATTTTGACAAACTAGACCTGTACAaaggaaaatgtaaattttgtaagaaTATTCATCATGAAGCATACATACCATATCTAAAGTGGCATCTGCGAAGAAAGCATAGTCAAGAAATAAGAGCTGCtgtacaaaaagaaattgcaaATAAGTCGCTATCgcaatatttcgaaattcaaGAGGACGAATTTAGTGCACGATGCAAACGTTGCAATCTTGAAAAGGACATATTTTATGGAACAGATGCCTTAATACACATTTGTTTAGATGAAAATGAACGTTTAAGATTACGACAAGATCCTGAAGATAATGATGTGAACAGAATGACACAACTAAGGACACAACAGTCTATAATTACTGAAAATGCAAATACAAACTCCCATCATGATGATATAAATAGGCAACCTCCTCGAAATGAAGATCAACAAAGGTAA
Protein Sequence: MYQDITAALEGSNNWVRKHILKLNSFTVQCNIDGCYKTYTTDNKHARMIAMVKGHLYHKHEIWNEEDRLKWENDNDLIWRYFDKVKLYEEKCKFCNILLHQAHIPLIKSHLRIKHSQEIRTIVQKEIVDKSLSQYYKIDEKEFSALCKHCNVKKDIFYGTDALIHHICFKKNQSLRLRQELDDNDDPGNEENEQSNTSRYCADAMAALEESDSWVWKHVVKLNNFTVQCNIDSCDQIYKYTIDHKHTNRMITRLKGHLYHKHEIWTEEDRLKWENNNDSIWQYFDKIDLYKERCKFCKYFRHEAYIHNLKLHLRKKHSQEISAAAQKEIATRSLSHCFKIDEEELIAWCKRCNHKMDILHGTDALMHHICFKKNQRLKSRQKSENNNVNRMTQQSTITENANTNSHHDDINRQVPQNQDFRQSNTSQYCADAMAALEGSDNWVWKHVVKLNNFTVQCNIDCCVQTYYNKNTSRLITSMRVHLCHKHKIWTKEDRLEWENNNDLIWQYFDKVDLYKGKCKFCRSICHEAYIPNLKSHVLKKHSQRIRAAAQKKIATKSLSQCFKIDEKELSVWCKCCNHKMDIFYGTDTLIHHICFKKNQRLKSRQKSEDNNVNKMTQQSIVTENTNTSSHHDDINRQAPQNQDLQQSDTYCTDVMALEGSNNWVRKHILKLDNSTVQCNIDGCDQTYKYTIDHKRTSRMITRIKGHLYNKHEIWTEEDRLKWENNNDLIWQYFDKLDLYKGKCKFCKNIHHEAYIPYLKWHLRRKHSQEIRAAVQKEIANKSLSQYFEIQEDEFSARCKRCNLEKDIFYGTDALIHICLDENERLRLRQDPEDNDVNRMTQLRTQQSIITENANTNSHHDDINRQPPRNEDQQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -